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L3_108_365G1_scaffold_414

Search features with annotation key words

Displaying items 1-30 of 83 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_108_365G1_scaffold_414_1
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(574..918)
DNA (345bp) protein (115aa)
Uncharacterized protein n=2 Tax=Coprobacillus RepID=G9QZ71_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ45061.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
IstB domain-containing protein ATP-binding protein
L3_108_365G1_scaffold_414_2
Clostridium novyi, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1226..1540)
DNA (315bp) protein (105aa)
Transposase n=2 Tax=Enterococcus RepID=K1A9E1_9ENTE
Uncharacterized protein {ECO:0000313|EMBL:KGM93591.1}; Flags: Fragment;; TaxID=1444289 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium novyi A str. 4552.;"
L3_108_365G1_scaffold_414_3
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


2003..2311
DNA (309bp) protein (103aa)
30S ribosomal protein S10 n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C2V5_9FIRM
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
rpsJ; 30S ribosomal protein S10
L3_108_365G1_scaffold_414_4
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


2333..3061
DNA (729bp) protein (243aa)
50S ribosomal protein L3 n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C2V6_9FIRM
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|RuleBase:RU003906}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
50S ribosomal protein L3
L3_108_365G1_scaffold_414_5
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


3083..3706
DNA (624bp) protein (208aa)
50S ribosomal protein L4 n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C2V7_9FIRM
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
50S ribosomal protein L4
L3_108_365G1_scaffold_414_6
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


3706..3996
DNA (291bp) protein (97aa)
50S ribosomal protein L23 n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C2V8_9FIRM
50S ribosomal protein L23 {ECO:0000256|HAMAP-Rule:MF_01369, ECO:0000256|RuleBase:RU003935}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
LSU ribosomal protein L23P
L3_108_365G1_scaffold_414_7
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


4046..4879
DNA (834bp) protein (278aa)
50S ribosomal protein L2 n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C2V9_9FIRM
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
LSU ribosomal protein L2P
L3_108_365G1_scaffold_414_8
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


4898..5176
DNA (279bp) protein (93aa)
30S ribosomal protein S19 n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C2W0_9FIRM
30S ribosomal protein S19 {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
SSU ribosomal protein S19P
L3_108_365G1_scaffold_414_9
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


5196..5528
DNA (333bp) protein (111aa)
50S ribosomal protein L22 n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C2W1_9FIRM
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
rplV; 50S ribosomal protein L22
L3_108_365G1_scaffold_414_10
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


5540..6193
DNA (654bp) protein (218aa)
30S ribosomal protein S3 n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C2W2_9FIRM
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
rpsC; 30S ribosomal protein S3
L3_108_365G1_scaffold_414_11
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


6196..6606
DNA (411bp) protein (137aa)
50S ribosomal protein L16 n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C2W3_9FIRM
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
rplP; 50S ribosomal protein L16
L3_108_365G1_scaffold_414_12
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


6609..6803
DNA (195bp) protein (65aa)
50S ribosomal protein L29 n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C2W4_9FIRM
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
50S ribosomal protein L29
L3_108_365G1_scaffold_414_13
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


6815..7075
DNA (261bp) protein (87aa)
30S ribosomal protein S17 n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C2W5_9FIRM
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
rpsQ; 30S ribosomal protein S17
L3_108_365G1_scaffold_414_14
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


7107..7475
DNA (369bp) protein (123aa)
50S ribosomal protein L14 n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C2W6_9FIRM
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
LSU ribosomal protein L14P
L3_108_365G1_scaffold_414_15
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


7488..7823
DNA (336bp) protein (112aa)
50S ribosomal protein L24 n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C2W7_9FIRM
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
rplX; 50S ribosomal protein L24
L3_108_365G1_scaffold_414_16
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


7835..8374
DNA (540bp) protein (180aa)
50S ribosomal protein L5 n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C2W8_9FIRM
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333, ECO:0000256|RuleBase:RU003931}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
50S ribosomal protein L5
L3_108_365G1_scaffold_414_17
Clostridium sp. CAG:1219, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


8391..8576
DNA (186bp) protein (62aa)
30S ribosomal protein S14 type Z n=10 Tax=Firmicutes RepID=B0N494_9FIRM
30S ribosomal protein S14 type Z {ECO:0000256|HAMAP-Rule:MF_01364, ECO:0000256|SAAS:SAAS00014984}; TaxID=1262772 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1219.;"
rpsN; 30S ribosomal protein S14
L3_108_365G1_scaffold_414_18
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


8610..9005
DNA (396bp) protein (132aa)
30S ribosomal protein S8 n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C2X0_9FIRM
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
rpsH; 30S ribosomal protein S8
L3_108_365G1_scaffold_414_19
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


9036..9581
DNA (546bp) protein (182aa)
50S ribosomal protein L6 n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C2X1_9FIRM
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
rplF; 50S ribosomal protein L6
L3_108_365G1_scaffold_414_20
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


9603..9959
DNA (357bp) protein (119aa)
50S ribosomal protein L18 n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C2X2_9FIRM
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
LSU ribosomal protein L18P
L3_108_365G1_scaffold_414_21
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


9972..10535
DNA (564bp) protein (188aa)
30S ribosomal protein S5 n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C2X3_9FIRM
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
rpsE; 30S ribosomal protein S5
L3_108_365G1_scaffold_414_22
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


10549..10731
DNA (183bp) protein (61aa)
50S ribosomal protein L30 n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C2X4_9FIRM
50S ribosomal protein L30 {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00082687}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
LSU ribosomal protein L30P
L3_108_365G1_scaffold_414_23
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


10745..11185
DNA (441bp) protein (147aa)
50S ribosomal protein L15 n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C2X5_9FIRM
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
rplO; 50S ribosomal protein L15
L3_108_365G1_scaffold_414_24
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


11187..12488
DNA (1302bp) protein (434aa)
Protein translocase subunit SecY n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C2X6_9FIRM
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
secY; preprotein translocase subunit SecY
L3_108_365G1_scaffold_414_25
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

12512..13159
DNA (648bp) protein (216aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|SAAS:SAAS00079673}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|SAAS:SAAS00079673};; ATP-AMP transphosphorylase {ECO:0000256|HAMAP-Rule:MF_00235}; ATP:AMP phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00235}; Adenylate monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00235}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
Adenylate kinase n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C2X7_9FIRM
adenylate kinase
L3_108_365G1_scaffold_414_26
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

13159..13905
DNA (747bp) protein (249aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
map; methionine aminopeptidase (EC:3.4.11.18)
Methionine aminopeptidase n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C2X8_9FIRM
L3_108_365G1_scaffold_414_27
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

13925..14146
DNA (222bp) protein (74aa)
Translation initiation factor IF-1 n=6 Tax=Erysipelotrichaceae RepID=B0N4A4_9FIRM
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
translation initiation factor 1
L3_108_365G1_scaffold_414_28
Catenibacterium sp. CAG:290, Catenibacterium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

14178..14291
DNA (114bp) protein (38aa)
50S ribosomal protein L36 n=2 Tax=Catenibacterium RepID=E2NS81_9FIRM
50S ribosomal protein L36 {ECO:0000256|HAMAP-Rule:MF_00251, ECO:0000256|RuleBase:RU000571}; TaxID=1262767 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Catenibacterium; environmental samples.;" source="Catenibacterium sp. CAG:290.;"
50S ribosomal protein L36
L3_108_365G1_scaffold_414_29
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


14318..14683
DNA (366bp) protein (122aa)
30S ribosomal protein S13 n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C2Y0_9FIRM
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
30S ribosomal protein S13
L3_108_365G1_scaffold_414_30
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


14704..15096
DNA (393bp) protein (131aa)
30S ribosomal protein S11 n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C2Y1_9FIRM
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
30S ribosomal protein S11
Displaying items 1-30 of 83 in total

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