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L3_108_365G1_scaffold_537

Search features with annotation key words

Displaying items 1-30 of 163 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_108_365G1_scaffold_537_1
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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108..311
DNA (204bp) protein (68aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RYF2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL64865.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
hypothetical protein
L3_108_365G1_scaffold_537_2
unknown

Not on your lists

380..499
DNA (120bp) protein (40aa)

This feature has no annotations

L3_108_365G1_scaffold_537_3
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

516..686
DNA (171bp) protein (57aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RYF1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KJF41468.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
L3_108_365G1_scaffold_537_4
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

809..1789
DNA (981bp) protein (327aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RYF0_9FIRM
AraC family transcriptional regulator {ECO:0000313|EMBL:KJF41467.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
AraC family transcriptional regulator
L3_108_365G1_scaffold_537_5
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1927..3372
DNA (1446bp) protein (482aa)
Rhamnulokinase n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RYE9_9FIRM
Rhamnulokinase {ECO:0000313|EMBL:EHL64862.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
rhamnulokinase
L3_108_365G1_scaffold_537_6
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3369..4616
DNA (1248bp) protein (416aa)
L-rhamnose isomerase {ECO:0000256|HAMAP-Rule:MF_00541}; EC=5.3.1.14 {ECO:0000256|HAMAP-Rule:MF_00541};; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
L-rhamnose isomerase n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RYE8_9FIRM
L-rhamnose isomerase
L3_108_365G1_scaffold_537_7
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4622..5446
DNA (825bp) protein (275aa)
Rhamnulose-1-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00770, ECO:0000256|SAAS:SAAS00048955}; EC=4.1.2.19 {ECO:0000256|HAMAP-Rule:MF_00770, ECO:0000256|SAAS:SAAS00048955};; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
L-rhamnulose 1-phosphate aldolase (EC:4.1.2.19)
Rhamnulose-1-phosphate aldolase n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RYE7_9FIRM
L3_108_365G1_scaffold_537_8
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5613..5771
DNA (159bp) protein (53aa)
Rubredoxin n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RYE6_9FIRM
Rubredoxin {ECO:0000256|PIRNR:PIRNR000071}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
rubredoxin
L3_108_365G1_scaffold_537_9
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5871..7151)
DNA (1281bp) protein (427aa)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000256|HAMAP-Rule:MF_00318}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
enolase (EC:4.2.1.11)
Enolase n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RYE5_9FIRM
L3_108_365G1_scaffold_537_10
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7345..7731)
DNA (387bp) protein (129aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RYE4_9FIRM
DNA-binding protein {ECO:0000313|EMBL:KJF41461.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
Mn-dependent transcriptional regulator
L3_108_365G1_scaffold_537_11
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7938..8147
DNA (210bp) protein (70aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RYE3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL64856.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
feoA; ferrous iron transport protein A
L3_108_365G1_scaffold_537_12
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8161..8382
DNA (222bp) protein (74aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RYE2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL64855.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
feoA; ferrous iron transport protein A
L3_108_365G1_scaffold_537_13
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8456..10639
DNA (2184bp) protein (728aa)
Ferrous iron transporter B n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RYE1_9FIRM
Ferrous iron transporter B {ECO:0000313|EMBL:EHL64854.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
feoB; ferrous iron transport protein B
L3_108_365G1_scaffold_537_14
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10738..11127
DNA (390bp) protein (130aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RYE0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL64853.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
Copper chaperone
L3_108_365G1_scaffold_537_15
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11544..14666
DNA (3123bp) protein (1041aa)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02003}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
isoleucyl-tRNA synthetase (EC:6.1.1.5)
Isoleucine--tRNA ligase n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RYD9_9FIRM
L3_108_365G1_scaffold_537_16
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14900..16174
DNA (1275bp) protein (425aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RYD8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL64851.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
transcriptional regulator
L3_108_365G1_scaffold_537_17
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16243..17682
DNA (1440bp) protein (480aa)
Protein translocase subunit SecD n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RYD7_9FIRM
Protein-export membrane protein SecD {ECO:0000313|EMBL:EHL64850.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
protein-export membrane protein SecF
L3_108_365G1_scaffold_537_18
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17666..18604
DNA (939bp) protein (313aa)
Protein-export membrane protein SecF n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RYD6_9FIRM
Protein-export membrane protein SecF {ECO:0000256|HAMAP-Rule:MF_01464}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
protein-export membrane protein SecF
L3_108_365G1_scaffold_537_19
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18708..19529
DNA (822bp) protein (274aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RYD5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL64848.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
xylose isomerase domain-containing protein TIM barrel
L3_108_365G1_scaffold_537_20
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19526..20023
DNA (498bp) protein (166aa)
Transcriptional repressor NrdR n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RYD4_9FIRM
Transcriptional repressor NrdR {ECO:0000256|HAMAP-Rule:MF_00440, ECO:0000256|SAAS:SAAS00087559}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
transcriptional regulator NrdR
L3_108_365G1_scaffold_537_21
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20003..20371)
DNA (369bp) protein (123aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RYD3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL64846.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
L3_108_365G1_scaffold_537_22
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20410..21087)
DNA (678bp) protein (226aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RYD2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL64845.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
Predicted membrane protein
L3_108_365G1_scaffold_537_23
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21202..22665
DNA (1464bp) protein (488aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RYD1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL64844.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
Bacillus/Clostridium GerA spore germination protein.
L3_108_365G1_scaffold_537_24
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22662..23717
DNA (1056bp) protein (352aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RYD0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KJF41451.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
L3_108_365G1_scaffold_537_25
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23698..24771
DNA (1074bp) protein (358aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RYC9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KJF41450.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
L3_108_365G1_scaffold_537_26
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24861..26234)
DNA (1374bp) protein (458aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RYC8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL64841.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
FAD dependent oxidoreductase
L3_108_365G1_scaffold_537_27
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26237..27451)
DNA (1215bp) protein (405aa)
Glycosyltransferase (EC:2.4.1.157)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RYC7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL64840.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
L3_108_365G1_scaffold_537_28
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27620..28558
DNA (939bp) protein (313aa)
HPr kinase/phosphorylase {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058411}; Short=HPrK/P {ECO:0000256|HAMAP-Rule:MF_01249};; EC=2.7.11.- {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058427};; EC=2.7.4.- {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058435};; HPr(Ser) kinase/phosphorylase {ECO:0000256|HAMAP-Rule:MF_01249}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
Hpr(Ser) kinase/phosphatase (EC:2.7.1.- 2.7.11.- 2.7.4.-)
HPr kinase/phosphorylase n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RYC6_9FIRM
L3_108_365G1_scaffold_537_29
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28602..29357
DNA (756bp) protein (252aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RYC5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL64838.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
PHP domain-containing protein
L3_108_365G1_scaffold_537_30
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29354..30319
DNA (966bp) protein (322aa)
ROK family protein (Putative glucokinase) n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RYC4_9FIRM
ROK family protein (Putative glucokinase) {ECO:0000313|EMBL:EHL64837.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
putative glucokinase
Displaying items 1-30 of 163 in total

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