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L3_108_365G1_scaffold_625

Search features with annotation key words

Displaying items 1-30 of 95 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_108_365G1_scaffold_625_1
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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110..448
DNA (339bp) protein (113aa)
LrgA family protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MXS5_9BACT
LrgA family protein {ECO:0000313|EMBL:EDS02411.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
effector of murein hydrolase LrgA
L3_108_365G1_scaffold_625_2

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448..1140
DNA (693bp) protein (231aa)
LrgB-like protein n=4 Tax=root RepID=K1U392_9ZZZZ
LrgB-like protein {ECO:0000313|EMBL:EKC65976.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Putative effector of murein hydrolase
L3_108_365G1_scaffold_625_3
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1274..2932
DNA (1659bp) protein (553aa)
TrkA C-terminal domain protein n=4 Tax=root RepID=B0MXS7_9BACT
TrkA C-terminal domain protein {ECO:0000313|EMBL:CDE64021.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
permease
L3_108_365G1_scaffold_625_4
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3717..6077)
DNA (2361bp) protein (787aa)
Ferrous iron transport protein B n=2 Tax=root RepID=B0MXT0_9BACT
Ferrous iron transport protein B {ECO:0000313|EMBL:EDS02416.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
iron transporter FeoB
L3_108_365G1_scaffold_625_5
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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6271..6444
DNA (174bp) protein (58aa)
Uncharacterized protein n=2 Tax=Alistipes RepID=B0MXT2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDE64023.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
Histone H1-like protein Hc1
L3_108_365G1_scaffold_625_6
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(6737..8446)
DNA (1710bp) protein (570aa)
Arylsulfatase n=1 Tax=Alistipes putredinis CAG:67 RepID=R7JJB7_9BACT
Arylsulfatase {ECO:0000313|EMBL:CDE64024.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
membrane-associated, metal-dependent hydrolase
L3_108_365G1_scaffold_625_7

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comp(8452..9684)
DNA (1233bp) protein (411aa)
Uncharacterized protein n=2 Tax=root RepID=R7JJF0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKC60210.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L3_108_365G1_scaffold_625_8
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(9694..10215)
DNA (522bp) protein (174aa)
Uncharacterized protein n=3 Tax=root RepID=B0MXT5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDE64026.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
Bacterial protein of unknown function (YtfJ_HI0045).
L3_108_365G1_scaffold_625_9
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(10259..11020)
DNA (762bp) protein (254aa)
DoxX family protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MXT6_9BACT
DoxX family protein {ECO:0000313|EMBL:EDS02422.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
hypothetical protein
L3_108_365G1_scaffold_625_10
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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11095..11640
DNA (546bp) protein (182aa)
Bacterial transferase hexapeptide repeat protein n=2 Tax=Alistipes RepID=B0MXT7_9BACT
Bacterial transferase hexapeptide repeat protein {ECO:0000313|EMBL:EDS02423.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
nodulation protein L
L3_108_365G1_scaffold_625_11
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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11652..12707
DNA (1056bp) protein (352aa)
Uncharacterized protein n=1 Tax=Alistipes putredinis CAG:67 RepID=R7JJC3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDE64029.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
alpha/beta hydrolase
L3_108_365G1_scaffold_625_12
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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12919..13398
DNA (480bp) protein (160aa)
Low molecular weight phosphotyrosine protein phosphatase n=2 Tax=root RepID=B0MXT9_9BACT
Low molecular weight phosphotyrosine protein phosphatase {ECO:0000313|EMBL:EDS02425.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
protein-tyrosine-phosphatase
L3_108_365G1_scaffold_625_13
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(13510..14481)
DNA (972bp) protein (324aa)
Uncharacterized protein n=3 Tax=root RepID=B0MXU0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDE64031.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
hypothetical protein
L3_108_365G1_scaffold_625_14
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(14500..16683)
DNA (2184bp) protein (728aa)
Peptidase S8/S53 family n=1 Tax=Alistipes putredinis CAG:67 RepID=R7JK82_9BACT
Peptidase S8/S53 family {ECO:0000313|EMBL:CDE64033.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
subtilisin-like serine protease
L3_108_365G1_scaffold_625_15
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(16762..17508)
DNA (747bp) protein (249aa)
3-oxoacyl-[acyl-carrier-protein] reductase (EC:1.1.1.100)
3-oxoacyl-[acyl-carrier-protein] reductase n=2 Tax=Alistipes RepID=B0MXU2_9BACT
3-oxoacyl-[acyl-carrier-protein] reductase {ECO:0000313|EMBL:CDE64035.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
L3_108_365G1_scaffold_625_16
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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17770..19050
DNA (1281bp) protein (427aa)
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAMAP-Rule:MF_00051};; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
Serine hydroxymethyltransferase n=3 Tax=root RepID=B0MXU4_9BACT
glycine/serine hydroxymethyltransferase
L3_108_365G1_scaffold_625_17
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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19057..19743
DNA (687bp) protein (229aa)
TIGR02453 family protein n=2 Tax=Alistipes RepID=B0MXU5_9BACT
TIGR02453 family protein {ECO:0000313|EMBL:CDE64039.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
hypothetical protein
L3_108_365G1_scaffold_625_18
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19919..20875
DNA (957bp) protein (319aa)
Uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MXU6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDS02432.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
esterase/lipase
L3_108_365G1_scaffold_625_19
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(21143..22987)
DNA (1845bp) protein (615aa)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164, ECO:0000256|SAAS:SAAS00039584}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; GFAT {ECO:0000256|HAMAP-Rule:MF_00164}; Glucosamine-6-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00164}; Hexosephosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; L-glutamine--D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
glutamine--fructose-6-phosphate transaminase (EC:2.6.1.16)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=2 Tax=root RepID=R7JK09_9BACT
L3_108_365G1_scaffold_625_20
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(23474..24838)
DNA (1365bp) protein (455aa)
Peptidase dimerization domain protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MXU9_9BACT
Peptidase dimerization domain protein {ECO:0000313|EMBL:EDS02435.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
acetylornithine deacetylase/succinyldiaminopimelate desuccinylase-like deacylase
L3_108_365G1_scaffold_625_21
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24848..25273)
DNA (426bp) protein (142aa)
Uncharacterized protein n=2 Tax=Alistipes RepID=B0MXV0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDE64046.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
lipoprotein NlpE
L3_108_365G1_scaffold_625_22
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(25278..26666)
DNA (1389bp) protein (463aa)
Phosphoglucosamine mutase {ECO:0000313|EMBL:EDS02437.1}; EC=5.4.2.10 {ECO:0000313|EMBL:EDS02437.1};; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
Phosphomannomutase (EC:5.4.2.8)
Phosphoglucosamine mutase n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MXV1_9BACT
L3_108_365G1_scaffold_625_23
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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26805..27680
DNA (876bp) protein (292aa)
Phosphorylase family n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MXV2_9BACT
Phosphorylase family {ECO:0000313|EMBL:EDS02438.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
uridine phosphorylase
L3_108_365G1_scaffold_625_24
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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27897..29021
DNA (1125bp) protein (375aa)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
DNA polymerase III subunit beta n=1 Tax=Alistipes putredinis CAG:67 RepID=R7JJH0_9BACT
DNA polymerase III subunit beta
L3_108_365G1_scaffold_625_25
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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29027..29800
DNA (774bp) protein (258aa)
Exonuclease n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MXV4_9BACT
Exonuclease {ECO:0000313|EMBL:EDS02440.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
DNA polymerase III subunit epsilon-like 3'-5' exonuclease
L3_108_365G1_scaffold_625_26
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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29804..31654
DNA (1851bp) protein (617aa)
LysM domain protein n=2 Tax=root RepID=B0MXV5_9BACT
LysM domain protein {ECO:0000313|EMBL:EDS02441.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
ABC-type branched-chain amino acid transport systems, periplasmic component
L3_108_365G1_scaffold_625_27

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31656..32309
DNA (654bp) protein (218aa)
Redox-sensing transcriptional repressor Rex n=2 Tax=root RepID=R7JKA7_9BACT
Redox-sensing transcriptional repressor rex {ECO:0000313|EMBL:EKC76910.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
AT-rich DNA-binding protein
L3_108_365G1_scaffold_625_28
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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32317..33072
DNA (756bp) protein (252aa)
Riboflavin kinase n=1 Tax=Alistipes putredinis CAG:67 RepID=R7JJE8_9BACT
Riboflavin kinase {ECO:0000313|EMBL:CDE64054.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
FAD synthase
L3_108_365G1_scaffold_625_29
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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33077..33484
DNA (408bp) protein (136aa)
Putative tol-pal system-associated acyl-CoA thioesterase n=3 Tax=root RepID=B0MXV8_9BACT
Putative tol-pal system-associated acyl-CoA thioesterase {ECO:0000313|EMBL:CDE64055.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
YbgC/YbaW family acyl-CoA thioester hydrolase
L3_108_365G1_scaffold_625_30
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33660..35720)
DNA (2061bp) protein (687aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=2 Tax=root RepID=R7JK26_9BACT
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein {ECO:0000313|EMBL:CDE64056.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
molecular chaperone of HSP90 family
Displaying items 1-30 of 95 in total

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