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L3_108_365G1_scaffold_642

Search features with annotation key words

Displaying items 1-30 of 79 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_108_365G1_scaffold_642_1
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(326..2467)
DNA (2142bp) protein (714aa)
heterodimeric methylmalonyl-CoA mutase large subunit precursor (EC:5.4.99.2)
Methylmalonyl-CoA mutase {ECO:0000313|EMBL:EDS03581.1}; EC=5.4.99.2 {ECO:0000313|EMBL:EDS03581.1};; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
Methylmalonyl-CoA mutase n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MWA1_9BACT
L3_108_365G1_scaffold_642_2
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(2480..4330)
DNA (1851bp) protein (617aa)
Methylmalonyl-CoA mutase, N-terminal domain/subunit n=2 Tax=Alistipes RepID=I3YNV0_ALIFI
methylmalonyl-CoA mutase, N-terminal domain/subunit
Methylmalonyl-CoA mutase, N-terminal domain/subunit {ECO:0000313|EMBL:AFL78668.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L3_108_365G1_scaffold_642_3
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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4995..7163
DNA (2169bp) protein (723aa)
L-glutamine synthetase (EC:6.3.1.2)
Glutamate--ammonia ligase catalytic domain protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y8D5_9BACT
Glutamate--ammonia ligase catalytic domain protein {ECO:0000313|EMBL:CDD24941.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
L3_108_365G1_scaffold_642_4
Alistipes sp. CAG:157, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7545..8027)
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:157 RepID=R5WQV6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCZ98306.1}; TaxID=1262692 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:157.;"
hypothetical protein
L3_108_365G1_scaffold_642_5
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(8695..9081)
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG 46020 / CIP 107999) RepID=I3YI70_ALIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL76688.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L3_108_365G1_scaffold_642_6
Saccharicrinis fermentans, Saccharicrinis, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(9118..10542)
DNA (1425bp) protein (475aa)
hypothetical protein n=1 Tax=Lewinella persica RepID=UPI00036686C4
Cold-shock protein {ECO:0000313|EMBL:GAF05883.1}; TaxID=869213 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Saccharicrinis.;" source="Saccharicrinis fermentans DSM 9555 = JCM 21142.;"
hypothetical protein
L3_108_365G1_scaffold_642_7
unknown

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comp(10511..10606)
DNA (96bp) protein (32aa)

This feature has no annotations

L3_108_365G1_scaffold_642_8
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10643..10891)
DNA (249bp) protein (83aa)
hypothetical protein n=1 Tax=Alistipes sp. JC136 RepID=UPI0002898E09
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL77218.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L3_108_365G1_scaffold_642_9
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11254..14346)
DNA (3093bp) protein (1031aa)
Uncharacterized protein n=1 Tax=Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG 46020 / CIP 107999) RepID=I3YJQ1_ALIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL77219.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L3_108_365G1_scaffold_642_10
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15303..16454)
DNA (1152bp) protein (384aa)
Uncharacterized protein n=1 Tax=Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG 46020 / CIP 107999) RepID=I3YJQ4_ALIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL77222.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L3_108_365G1_scaffold_642_11
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16432..17151)
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Alistipes sp. HGB5 RepID=E4MDD1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EFR57060.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
hypothetical protein
L3_108_365G1_scaffold_642_12
Prevotella sp. oral taxon 317, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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17399..18427
DNA (1029bp) protein (343aa)
Phospholipase, patatin family n=1 Tax=Prevotella sp. oral taxon 317 str. F0108 RepID=D3IHA6_9BACT
Phospholipase, patatin family {ECO:0000313|EMBL:EFC69402.1}; TaxID=575615 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella sp. oral taxon 317 str. F0108.;"
patatin-like phospholipase
L3_108_365G1_scaffold_642_13
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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18440..19426
DNA (987bp) protein (329aa)
Uncharacterized protein n=1 Tax=Bacteroides thetaiotaomicron dnLKV9 RepID=R9H780_BACT4
Uncharacterized protein {ECO:0000313|EMBL:EOR99932.1}; TaxID=1235785 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron dnLKV9.;"
hypothetical protein
L3_108_365G1_scaffold_642_14
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19617..21140
DNA (1524bp) protein (508aa)
Uncharacterized protein n=1 Tax=Bacteroides thetaiotaomicron dnLKV9 RepID=R9H7B3_BACT4
Uncharacterized protein {ECO:0000313|EMBL:EOR99931.1}; TaxID=1235785 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron dnLKV9.;"
molybdopterin/thiamine biosynthesis dinucleotide-utilizing protein
L3_108_365G1_scaffold_642_15
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23053..23877
DNA (825bp) protein (275aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y1G3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD25064.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L3_108_365G1_scaffold_642_16
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24035..24874
DNA (840bp) protein (280aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6XTW1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD25065.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L3_108_365G1_scaffold_642_17
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24942..26144)
DNA (1203bp) protein (401aa)
Site-specific recombinase XerD n=1 Tax=Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG 46020 / CIP 107999) RepID=I3YI83_ALIFI
site-specific recombinase XerD
Site-specific recombinase XerD {ECO:0000313|EMBL:AFL76701.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L3_108_365G1_scaffold_642_18
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26861..27544
DNA (684bp) protein (228aa)
Nitroreductase n=1 Tax=Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG 46020 / CIP 107999) RepID=I3YI53_ALIFI
nitroreductase
Nitroreductase {ECO:0000313|EMBL:AFL76671.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L3_108_365G1_scaffold_642_19
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(27646..27906)
DNA (261bp) protein (87aa)
50S ribosomal protein L27 n=4 Tax=Alistipes RepID=I3YHV0_ALIFI
50S ribosomal protein L27
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
L3_108_365G1_scaffold_642_20
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(27922..28233)
DNA (312bp) protein (104aa)
50S ribosomal protein L21 n=2 Tax=root RepID=R6VVS8_9BACT
50S ribosomal protein L21
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L3_108_365G1_scaffold_642_21
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28385..28753
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Alistipes sp. HGB5 RepID=E4MEV4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EFR56508.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
L3_108_365G1_scaffold_642_22
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28750..29700
DNA (951bp) protein (317aa)
Uncharacterized protein n=2 Tax=Alistipes RepID=I3YHU7_ALIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL76565.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L3_108_365G1_scaffold_642_23
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29691..30650
DNA (960bp) protein (320aa)
Uncharacterized protein n=1 Tax=Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG 46020 / CIP 107999) RepID=I3YHU6_ALIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL76564.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L3_108_365G1_scaffold_642_24
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30675..31544
DNA (870bp) protein (290aa)
3'(2'),5'-bisphosphate nucleotidase {ECO:0000313|EMBL:EFR56489.1}; EC=3.1.3.7 {ECO:0000313|EMBL:EFR56489.1};; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
3'-phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase (EC:3.1.3.7)
3'-phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase n=3 Tax=Alistipes RepID=I3YHU5_ALIFI
L3_108_365G1_scaffold_642_25
unknown

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comp(31390..31950)
DNA (561bp) protein (187aa)

This feature has no annotations

L3_108_365G1_scaffold_642_26
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32052..32315)
DNA (264bp) protein (88aa)
Conserved domain protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y802_9BACT
Conserved domain protein {ECO:0000313|EMBL:CDD24826.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L3_108_365G1_scaffold_642_27
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32512..33852
DNA (1341bp) protein (447aa)
Potassium transporter peripheral membrane component n=2 Tax=Alistipes RepID=E4MEW0_9BACT
K+ transport system, NAD-binding component
Potassium transporter peripheral membrane component {ECO:0000313|EMBL:EFR56633.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
L3_108_365G1_scaffold_642_28
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33860..35320
DNA (1461bp) protein (487aa)
GH3 auxin-responsive promoter n=3 Tax=root RepID=R7JLB9_9BACT
GH3 auxin-responsive promoter {ECO:0000313|EMBL:CDE64403.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
GH3 auxin-responsive promoter.
L3_108_365G1_scaffold_642_29
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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35337..35954
DNA (618bp) protein (206aa)
Deoxynucleoside kinase {ECO:0000313|EMBL:EDS04219.1}; EC=2.7.1.- {ECO:0000313|EMBL:EDS04219.1};; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
deoxynucleoside kinase n=1 Tax=Alistipes sp. JC136 RepID=UPI0002898735
Deoxynucleoside kinases
L3_108_365G1_scaffold_642_30
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35951..37360
DNA (1410bp) protein (470aa)
NOL1/NOP2/sun family protein n=1 Tax=Alistipes putredinis CAG:67 RepID=R7JNE0_9BACT
NOL1/NOP2/sun family protein {ECO:0000313|EMBL:CDE64412.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
tRNA/rRNA cytosine-C5-methylase
Displaying items 1-30 of 79 in total

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