ggKbase home page

L3_108_365G1_scaffold_715

Search features with annotation key words

Displaying items 1-30 of 68 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_108_365G1_scaffold_715_1
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2..499)
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PFJ2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS09768.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
hypothetical protein
L3_108_365G1_scaffold_715_2
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(700..3468)
DNA (2769bp) protein (923aa)
Sel1 repeat protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PFJ0_9FIRM
Sel1 repeat protein {ECO:0000313|EMBL:EDS09766.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
hypothetical protein
L3_108_365G1_scaffold_715_3
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3482..3889)
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PFI9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS09765.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
hypothetical protein
L3_108_365G1_scaffold_715_4
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4339..5382)
DNA (1044bp) protein (348aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. 1-3 RepID=R9M8U1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KJJ68649.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
hypothetical protein
L3_108_365G1_scaffold_715_5
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5382..5642)
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YTF6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM43914.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
hypothetical protein
L3_108_365G1_scaffold_715_6
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5654..6355)
DNA (702bp) protein (234aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=B0PFL4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO21715.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_108_365G1_scaffold_715_7
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6373..6963)
DNA (591bp) protein (197aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=B0PFL4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS09452.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
L3_108_365G1_scaffold_715_8
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6914..7999)
DNA (1086bp) protein (362aa)
Peptidase, M23 family n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PFI2_9FIRM
Peptidase, M23 family {ECO:0000313|EMBL:EDS09758.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
putative metalloendopeptidase
L3_108_365G1_scaffold_715_9
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8012..9862)
DNA (1851bp) protein (617aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CME0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO21720.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_108_365G1_scaffold_715_10
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9959..10552)
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PFH7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS09753.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
hypothetical protein
L3_108_365G1_scaffold_715_11
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10554..10835)
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YTG6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO21722.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_108_365G1_scaffold_715_12
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10847..11413)
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PFH5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS09751.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
L3_108_365G1_scaffold_715_13
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11438..12106)
DNA (669bp) protein (223aa)
Cytosine-specific methyltransferase n=2 Tax=Clostridiales RepID=B0PFM4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI80176.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
site-specific DNA methylase
L3_108_365G1_scaffold_715_14
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12531..13298)
DNA (768bp) protein (256aa)
Cytosine-specific methyltransferase n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YTG8_9FIRM
DNA (Cytosine-5-)-methyltransferase {ECO:0000313|EMBL:EHM43926.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
putative methyltransferase
L3_108_365G1_scaffold_715_15
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13298..13687)
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YTG9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM43927.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
hypothetical protein
L3_108_365G1_scaffold_715_16
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13684..14592)
DNA (909bp) protein (303aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=B0PFH3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO23747.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_108_365G1_scaffold_715_17
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14722..15150)
DNA (429bp) protein (143aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0PFH2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM43929.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
hypothetical protein
L3_108_365G1_scaffold_715_18
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15169..15687)
DNA (519bp) protein (173aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CEY0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF54436.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
L3_108_365G1_scaffold_715_19
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15724..16065)
DNA (342bp) protein (114aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=B0P767_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS12370.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
hypothetical protein
L3_108_365G1_scaffold_715_20
unknown

Not on your lists

comp(16169..16705)
DNA (537bp) protein (179aa)

This feature has no annotations

L3_108_365G1_scaffold_715_21
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16799..17218)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PFN3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS09471.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
hypothetical protein
L3_108_365G1_scaffold_715_22
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17446..18486)
DNA (1041bp) protein (347aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=B0P770_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS12373.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
hypothetical protein
L3_108_365G1_scaffold_715_23
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18552..19109)
DNA (558bp) protein (186aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=B0P771_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS12374.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
hypothetical protein
L3_108_365G1_scaffold_715_24
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19304..19849)
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YTH9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM43937.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
hypothetical protein
L3_108_365G1_scaffold_715_25
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19846..20244)
DNA (399bp) protein (133aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=B0P773_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO23737.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_108_365G1_scaffold_715_26
Oscillibacter valericigenes, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20238..20834)
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 / Sjm18-20) RepID=G4L091_OSCVS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL01472.1}; TaxID=693746 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 /; Sjm18-20).;"
L3_108_365G1_scaffold_715_27
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20847..21719)
DNA (873bp) protein (291aa)
Bacterial type II secretion system protein F domain protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2DKF3_9CLOT
Bacterial type II secretion system protein F domain protein {ECO:0000313|EMBL:ERI80156.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
L3_108_365G1_scaffold_715_28
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21724..22653)
DNA (930bp) protein (310aa)
Uncharacterized protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YTI4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM43942.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
hypothetical protein
L3_108_365G1_scaffold_715_29
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22650..24368)
DNA (1719bp) protein (573aa)
Type II/IV secretion system protein n=3 Tax=Clostridiales RepID=B0P778_9FIRM
Type II/IV secretion system protein {ECO:0000313|EMBL:EDS12381.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA subfamily
L3_108_365G1_scaffold_715_30
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24362..25183)
DNA (822bp) protein (274aa)
Uncharacterized protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YTI7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM43945.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
hypothetical protein
Displaying items 1-30 of 68 in total

View Taxonomy