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L3_108_365G1_scaffold_740

Search features with annotation key words

Displaying items 1-30 of 75 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_108_365G1_scaffold_740_1
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

364..1200
DNA (837bp) protein (279aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FJ14_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA83964.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Predicted membrane protein
L3_108_365G1_scaffold_740_2
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1226..2872
DNA (1647bp) protein (549aa)
Sulfate permease n=2 Tax=Clostridium RepID=B6FJ13_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22444.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
sulfate permease, SulP family
L3_108_365G1_scaffold_740_3
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2875..3105
DNA (231bp) protein (77aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FJ12_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA83962.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L3_108_365G1_scaffold_740_4
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3604..4611)
DNA (1008bp) protein (336aa)
Transposase, IS4 family (Fragment) n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FVR6_9CLOT
Transposase, IS4 family {ECO:0000313|EMBL:EEA79874.1}; Flags: Fragment;; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Transposase DDE domain.
L3_108_365G1_scaffold_740_5
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4999..5595
DNA (597bp) protein (199aa)
SNARE-like domain protein n=2 Tax=Clostridium RepID=B6FJ07_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22440.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L3_108_365G1_scaffold_740_6
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5627..6877
DNA (1251bp) protein (417aa)
Glycosyltransferase, group 1 family protein {ECO:0000313|EMBL:EEA83984.1}; EC=2.4.-.- {ECO:0000313|EMBL:EEA83984.1};; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Glycosyltransferase, group 1 family protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FJ06_9CLOT
glycosyltransferase
L3_108_365G1_scaffold_740_7
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6858..7790
DNA (933bp) protein (311aa)
Glycosyltransferase, group 1 family protein {ECO:0000313|EMBL:EEA83983.1}; EC=2.4.-.- {ECO:0000313|EMBL:EEA83983.1};; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Glycosyltransferase, group 1 family protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FJ05_9CLOT
Glycosyltransferase
L3_108_365G1_scaffold_740_8
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(7841..8509)
DNA (669bp) protein (223aa)
30S ribosomal protein S1 n=2 Tax=Clostridium RepID=B6FJ02_9CLOT
30S ribosomal protein S1 {ECO:0000313|EMBL:EEA83992.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Ribosomal protein S1
L3_108_365G1_scaffold_740_9
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8648..10297
DNA (1650bp) protein (550aa)
Inorganic pyrophosphatase/exopolyphosphatase (EC:3.6.1.1)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PVB3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22436.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L3_108_365G1_scaffold_740_10
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10308..10889
DNA (582bp) protein (194aa)
Flavin reductase-like protein n=2 Tax=Clostridium RepID=B6FJ00_9CLOT
Flavin reductase-like protein {ECO:0000313|EMBL:EEA83990.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family
L3_108_365G1_scaffold_740_11
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10995..11570
DNA (576bp) protein (192aa)
Polysaccharide deacetylase n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FIZ9_9CLOT
Polysaccharide deacetylase {ECO:0000313|EMBL:EEA83989.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Predicted xylanase/chitin deacetylase
L3_108_365G1_scaffold_740_12
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11589..12308
DNA (720bp) protein (240aa)
ThiF family protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FIZ8_9CLOT
ThiF family protein {ECO:0000313|EMBL:EEA83988.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1
L3_108_365G1_scaffold_740_13
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12322..13653
DNA (1332bp) protein (444aa)
Recombination factor protein RarA (Fragment) n=2 Tax=Clostridium nexile DSM 1787 RepID=B6FIZ7_9CLOT
Recombination factor protein RarA {ECO:0000313|EMBL:EEA83987.1}; Flags: Fragment;; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
ATPase related to the helicase subunit of the Holliday junction resolvase
L3_108_365G1_scaffold_740_14
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13697..14542)
DNA (846bp) protein (282aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FIZ5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA84022.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L3_108_365G1_scaffold_740_15
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14545..15273)
DNA (729bp) protein (243aa)
ABC transporter, ATP-binding protein n=2 Tax=Clostridium RepID=B6FIZ4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22430.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
bcrA2; bacitracin transport ATP-binding protein BcrA
L3_108_365G1_scaffold_740_16
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15396..15908)
DNA (513bp) protein (171aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FIZ3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA84020.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L3_108_365G1_scaffold_740_17
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15921..16853)
DNA (933bp) protein (311aa)
Radical SAM protein, TIGR01212 family n=2 Tax=Clostridium RepID=B6FIZ2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22428.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
radical SAM protein, TIGR01212 family
L3_108_365G1_scaffold_740_18
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16853..18001)
DNA (1149bp) protein (383aa)
Malic enzyme (EC:1.1.1.38)
Malic enzyme, NAD binding domain protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FIZ1_9CLOT
Malic enzyme, NAD binding domain protein {ECO:0000313|EMBL:EEA84018.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
L3_108_365G1_scaffold_740_19
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18203..19528
DNA (1326bp) protein (442aa)
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Transcription termination factor Rho n=2 Tax=Clostridium RepID=B6FIZ0_9CLOT
transcription termination factor Rho
L3_108_365G1_scaffold_740_20
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19891..20823
DNA (933bp) protein (311aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FIY8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA84015.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Predicted metal-dependent enzyme
L3_108_365G1_scaffold_740_21
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20820..21683
DNA (864bp) protein (288aa)
Release factor glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02126}; Short=RF MTase {ECO:0000256|HAMAP-Rule:MF_02126};; EC=2.1.1.297 {ECO:0000256|HAMAP-Rule:MF_02126};; N5-glutamine methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-(glutamine-N5) MTase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-glutamine N-methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Release factor glutamine methyltransferase n=2 Tax=Clostridium RepID=B6FIY7_9CLOT
protein-(glutamine-N5) methyltransferase, release factor-specific
L3_108_365G1_scaffold_740_22
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21739..22809
DNA (1071bp) protein (357aa)
Peptide chain release factor 1 n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FIY6_9CLOT
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
bacterial peptide chain release factor 1 (bRF-1)
L3_108_365G1_scaffold_740_23
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22976..24712
DNA (1737bp) protein (579aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PV97_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22421.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
ABC-type multidrug transport system, ATPase and permease components
L3_108_365G1_scaffold_740_24
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24816..25721
DNA (906bp) protein (302aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FIY4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA84011.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L3_108_365G1_scaffold_740_25
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25736..26923
DNA (1188bp) protein (396aa)
Aminotransferase, class I/II {ECO:0000313|EMBL:EEA84010.1}; EC=2.6.1.- {ECO:0000313|EMBL:EEA84010.1};; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Aspartate/tyrosine/aromatic aminotransferase (EC:2.6.1.1)
Aminotransferase, class I/II n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FIY3_9CLOT
L3_108_365G1_scaffold_740_26
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26939..28015
DNA (1077bp) protein (359aa)
Histidinol-phosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01023}; EC=2.6.1.9 {ECO:0000256|HAMAP-Rule:MF_01023};; Imidazole acetol-phosphate transaminase {ECO:0000256|HAMAP-Rule:MF_01023}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
histidinol-phosphate aminotransferase (EC:2.6.1.9)
Histidinol-phosphate aminotransferase n=1 Tax=Clostridium nexile CAG:348 RepID=R6PDM4_9CLOT
L3_108_365G1_scaffold_740_27
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28009..28857
DNA (849bp) protein (283aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FIY1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA84008.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Predicted membrane protein
L3_108_365G1_scaffold_740_28
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28859..29542
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FIY0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA84007.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
DNA alkylation repair protein
L3_108_365G1_scaffold_740_29
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29565..30398
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PFQ2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22415.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
AraC-type DNA-binding domain-containing proteins
L3_108_365G1_scaffold_740_30
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30432..31865
DNA (1434bp) protein (478aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PNI0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22414.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
lipoprotein
Displaying items 1-30 of 75 in total

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