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L3_108_365G1_scaffold_5721

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_108_365G1_scaffold_5721_1
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(70..273)
DNA (204bp) protein (68aa)
Uncharacterized protein n=6 Tax=Clostridium difficile RepID=U3YV19_CLODI
Excisionase from transposon Tn916 {ECO:0000313|EMBL:EEG30212.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
xis; excisionase
L3_108_365G1_scaffold_5721_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(648..902)
DNA (255bp) protein (85aa)
Helix-turn-helix domain protein n=52 Tax=Clostridium difficile RepID=T2TJM7_CLODI
Helix-turn-helix domain protein {ECO:0000313|EMBL:EQE70030.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
hypothetical protein
L3_108_365G1_scaffold_5721_3
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(905..1324)
DNA (420bp) protein (140aa)
Sigma-70, region 4 n=77 Tax=Firmicutes RepID=C0EE66_9CLOT
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:EOI44396.1}; TaxID=1158636 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium EnGen0313.;"
RNA polymerase sigma factor
L3_108_365G1_scaffold_5721_4
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1591..1821)
DNA (231bp) protein (77aa)
Uncharacterized protein n=71 Tax=Clostridiales RepID=T2W4R4_CLODI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEG30215.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
L3_108_365G1_scaffold_5721_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1958..2392)
DNA (435bp) protein (145aa)
Uncharacterized protein n=65 Tax=Firmicutes RepID=C0EE81_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EQE59176.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
DNA-binding domain-containing protein
L3_108_365G1_scaffold_5721_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2471..3130)
DNA (660bp) protein (220aa)
Bacterial regulatory helix-turn-helix s, AraC family protein n=4 Tax=Clostridium difficile RepID=T2TW60_CLODI
Bacterial regulatory helix-turn-helix s, AraC family protein {ECO:0000313|EMBL:EQE59181.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
DNA-binding domain-containing protein
Displaying 6 items

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