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L3_108_365G1_scaffold_1017

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_108_365G1_scaffold_1017_1
Heliobacterium modesticaldum, Heliobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3..749
DNA (747bp) protein (249aa)
M23 peptidase domain protein n=2 Tax=Clostridia RepID=B0TGF7_HELMI
m23 peptidase domain protein
M23 peptidase domain protein {ECO:0000313|EMBL:ABZ83218.1}; TaxID=498761 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Heliobacteriaceae; Heliobacterium.;" source="Heliobacterium modesticaldum (strain ATCC 51547 / Ice1).;"
L3_108_365G1_scaffold_1017_2
unknown

Not on your lists

765..1049
DNA (285bp) protein (95aa)

This feature has no annotations

L3_108_365G1_scaffold_1017_3
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1073..1333
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9LGC7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS57421.1}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
hypothetical protein
L3_108_365G1_scaffold_1017_4
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1878..2279
DNA (402bp) protein (134aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CMI8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO21239.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_108_365G1_scaffold_1017_5
unknown

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comp(2424..2927)
DNA (504bp) protein (168aa)

This feature has no annotations

L3_108_365G1_scaffold_1017_6
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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3125..4240
DNA (1116bp) protein (372aa)
Sel1 repeat protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PGM6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF54460.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L3_108_365G1_scaffold_1017_7
Oscillibacter valericigenes, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4258..4644
DNA (387bp) protein (129aa)
hypothetical protein n=1 Tax=Clostridium sporosphaeroides RepID=UPI00037D4AF6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAK98103.1}; TaxID=693746 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 /; Sjm18-20).;"
L3_108_365G1_scaffold_1017_8
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4634..5641
DNA (1008bp) protein (336aa)
TraG/TraD family protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PC08_9FIRM
TraG/TraD family protein {ECO:0000313|EMBL:EDS11133.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
trag/trad family protein
L3_108_365G1_scaffold_1017_9
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5796..6383)
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 PF36_9FIRM">RepID=B0PF36_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS09969.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
L3_108_365G1_scaffold_1017_10
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6472..7506)
DNA (1035bp) protein (345aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CG09_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO32287.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_108_365G1_scaffold_1017_11
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7625..7894
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W0E6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ37996.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
hypothetical protein
L3_108_365G1_scaffold_1017_12
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8067..8369
DNA (303bp) protein (101aa)
Toxin-antitoxin system, antitoxin component, Xre family n=1 Tax=Clostridium sp. D5 RepID=F0YTE2_9CLOT
Toxin-antitoxin system, antitoxin component, Xre family {ECO:0000313|EMBL:EGB94162.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
XRE family transcriptional regulator
L3_108_365G1_scaffold_1017_13
Oscillibacter valericigenes, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8405..8752
DNA (348bp) protein (116aa)
Putative Xre family DNA-binding protein n=1 Tax=Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 / Sjm18-20) RepID=G4L052_OSCVS
putative Xre family DNA-binding protein
Putative Xre family DNA-binding protein {ECO:0000313|EMBL:BAL01433.1}; TaxID=693746 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 /; Sjm18-20).;"
L3_108_365G1_scaffold_1017_14
unknown

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8803..8985
DNA (183bp) protein (61aa)

This feature has no annotations

L3_108_365G1_scaffold_1017_15
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9160..9597
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. 1-3 RepID=R9M5H3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS66230.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
site-specific recombinase, DNA invertase Pin
L3_108_365G1_scaffold_1017_16
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9761..10675
DNA (915bp) protein (305aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6P2T2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM97404.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
hypothetical protein
L3_108_365G1_scaffold_1017_17
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10988..12136)
DNA (1149bp) protein (383aa)
Transposase n=1 Tax=Clostridium leptum DSM 753 RepID=A7VUR6_9CLOT
Transposase {ECO:0000313|EMBL:EDO60716.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
transposase IS3/IS911 family protein
L3_108_365G1_scaffold_1017_18
Acinetobacter sp. CIP 56.2, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12667..15648
DNA (2982bp) protein (994aa)
Uncharacterized protein n=1 Tax=Acinetobacter sp. CIP 56.2 RepID=N8XQL5_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:ENV09360.1}; TaxID=1144672 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="Acinetobacter sp. CIP 56.2.;"
hypothetical protein
L3_108_365G1_scaffold_1017_19
Paenibacillus lactis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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15649..17073
DNA (1425bp) protein (475aa)
Putative transcriptional regulator n=1 Tax=Paenibacillus lactis 154 RepID=G4HNI0_9BACL
Putative transcriptional regulator {ECO:0000313|EMBL:EHB50711.1}; TaxID=743719 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus lactis 154.;"
transcriptional regulator
L3_108_365G1_scaffold_1017_20
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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17491..17979
DNA (489bp) protein (163aa)
Recombinase n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P8W3_9FIRM
Recombinase {ECO:0000313|EMBL:EDS12359.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
Resolvase domain
L3_108_365G1_scaffold_1017_21
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18028..18654
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P8W2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS12358.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
KilA domain-containing protein
L3_108_365G1_scaffold_1017_22
Pseudomonas sp. MT-1, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18948..20441
DNA (1494bp) protein (498aa)
Putative uncharacterized protein n=1 Tax=Neisseria gonorrhoeae F62 RepID=D6JNN0_NEIGO
Uncharacterized protein {ECO:0000313|EMBL:BAP78887.1}; TaxID=150396 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. MT-1.;"
hypothetical protein
L3_108_365G1_scaffold_1017_23
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21239..21751
DNA (513bp) protein (171aa)
Resolvase protein n=2 Tax=Oscillibacter RepID=U2PVX7_9FIRM
Resolvase protein {ECO:0000313|EMBL:ERK56489.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
recombinase
L3_108_365G1_scaffold_1017_24
Selenomonas ruminantium, Selenomonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

22021..22800
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Selenomonas ruminantium subsp. lactilytica (strain NBRC 103574 / TAM6421) RepID=I0GTF0_SELRL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL84037.1}; TaxID=927704 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Selenomonas.;" source="Selenomonas ruminantium subsp. lactilytica (strain NBRC 103574 /; TAM6421).;"
L3_108_365G1_scaffold_1017_25
unknown

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22932..23144
DNA (213bp) protein (71aa)

This feature has no annotations

L3_108_365G1_scaffold_1017_26
Methanoplanus limicola, Methanoplanus, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

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comp(23411..23872)
DNA (462bp) protein (154aa)
Transcriptional regulator, MarR family n=1 Tax=Methanoplanus limicola DSM 2279 RepID=H1Z0L9_9EURY
Transcriptional regulator, MarR family {ECO:0000313|EMBL:EHQ35276.1}; TaxID=937775 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanomicrobiaceae; Methanoplanus.;" source="Methanoplanus limicola DSM 2279.;"
MarR family transcriptional regulator
L3_108_365G1_scaffold_1017_27
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24207..25415
DNA (1209bp) protein (403aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HKI0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHE98094.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
aspC; putative aspartate transaminase
L3_108_365G1_scaffold_1017_28
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25437..26150
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:81 RepID=R5G534_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY12435.1}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
hypothetical protein
L3_108_365G1_scaffold_1017_29
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26266..26976
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:58 RepID=R6REJ6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC47318.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
hypothetical protein
L3_108_365G1_scaffold_1017_30
Brevibacillus brevis, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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27006..28202
DNA (1197bp) protein (399aa)
Putative uncharacterized protein n=1 Tax=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) RepID=C0ZBH6_BREBN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAH43135.1}; TaxID=358681 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Brevibacillus.;" source="Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599).;"
Displaying items 1-30 of 32 in total

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