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L3_114_000G1_scaffold_10

Search features with annotation key words

Displaying items 1-30 of 265 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_000G1_scaffold_10_1
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..205
DNA (204bp) protein (68aa)
Cold-shock DNA-binding domain protein n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JHX2_CELLD
cold-shock DNA-binding domain-containing protein
Cold-shock DNA-binding domain protein {ECO:0000313|EMBL:ADZ81916.1}; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
L3_114_000G1_scaffold_10_2
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(301..1782)
DNA (1482bp) protein (494aa)
Uncharacterized protein n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JL65_CELLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADZ85710.1}; Flags: Precursor;; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
L3_114_000G1_scaffold_10_3
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1926..2723)
DNA (798bp) protein (266aa)
Peptidase C60 sortase A and B n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JL64_CELLD
peptidase C60 sortase A and B
Peptidase C60 sortase A and B {ECO:0000313|EMBL:ADZ85709.1}; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
L3_114_000G1_scaffold_10_4
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3100..3300
DNA (201bp) protein (67aa)
Cold-shock DNA-binding domain protein n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JHX2_CELLD
cold-shock DNA-binding domain-containing protein
Cold-shock DNA-binding domain protein {ECO:0000313|EMBL:ADZ81916.1}; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
L3_114_000G1_scaffold_10_5
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3689..4912)
DNA (1224bp) protein (408aa)
Sodium/glutamate symporter n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JHX0_CELLD
sodium/glutamate symporter
Sodium/glutamate symporter {ECO:0000313|EMBL:ADZ81914.1}; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
L3_114_000G1_scaffold_10_6
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5318..5572
DNA (255bp) protein (85aa)
Transcriptional regulator, MarR family n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6LYJ8_CLOB8
MarR family transcriptional regulator
Transcriptional regulator, MarR family {ECO:0000313|EMBL:ABR35428.1}; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium; acetobutylicum).;"
L3_114_000G1_scaffold_10_7
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5698..5898
DNA (201bp) protein (67aa)
Cold-shock DNA-binding domain protein n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JHX2_CELLD
cold-shock DNA-binding domain-containing protein
Cold-shock DNA-binding domain protein {ECO:0000313|EMBL:ADZ81916.1}; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
L3_114_000G1_scaffold_10_8
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6160..6357
DNA (198bp) protein (66aa)
Metallo-beta-lactamase family protein n=2 Tax=Clostridium botulinum F RepID=A7GFJ6_CLOBL
metallo-beta-lactamase family protein
Metal-dependent hydrolase {ECO:0000313|EMBL:KEJ02461.1}; TaxID=1379740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum A2B3 87.;"
L3_114_000G1_scaffold_10_9
Clostridium sp. NCR, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6487..6930
DNA (444bp) protein (148aa)
MarR family protein n=1 Tax=Clostridium bifermentans ATCC 19299 RepID=T4W0P9_CLOBI
Uncharacterized protein {ECO:0000313|EMBL:KGJ48424.1}; TaxID=1538552 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. NCR.;"
transcriptional regulator
L3_114_000G1_scaffold_10_10
Clostridium sp. NCR, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6944..8314
DNA (1371bp) protein (457aa)
MATE efflux family protein n=1 Tax=Clostridium bifermentans ATCC 19299 RepID=T4W8Y3_CLOBI
Uncharacterized protein {ECO:0000313|EMBL:KGJ48423.1}; TaxID=1538552 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. NCR.;"
putative efflux protein, MATE family
L3_114_000G1_scaffold_10_11
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8541..9530)
DNA (990bp) protein (330aa)
ABC transporter substrate binding family protein n=44 Tax=Clostridium difficile RepID=T3I1K4_CLODC
ABC transporter substrate binding family protein {ECO:0000313|EMBL:KIE46580.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
ABC-type transport system, sugar-familyextracellular solute-binding protein
L3_114_000G1_scaffold_10_12
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9602..10357)
DNA (756bp) protein (252aa)
ABC transporter, ATP-binding protein n=7 Tax=Clostridium difficile RepID=C9XMA6_CLODC
ABC transporter family protein {ECO:0000313|EMBL:KIE46688.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
ABC transporter ATP-binding protein
L3_114_000G1_scaffold_10_13
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10344..11237)
DNA (894bp) protein (298aa)
Branched-chain amino acid transport system / permease component family protein n=7 Tax=Clostridium difficile RepID=T3I1M7_CLODI
Branched-chain amino acid transport system / permease component family protein {ECO:0000313|EMBL:KIE46662.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
ABC-type transport system, sugar-familypermease
L3_114_000G1_scaffold_10_14
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12384..13895
DNA (1512bp) protein (504aa)
transporter n=1 Tax=Clostridium sp. JC122 RepID=UPI00028869BE
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
neurotransmitter symporter family protein
L3_114_000G1_scaffold_10_15
unknown

Not on your lists

13896..13997
DNA (102bp) protein (34aa)

This feature has no annotations

L3_114_000G1_scaffold_10_16
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14373..14936
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. 14-2 RepID=S0J823_9FIRM
Cell surface peptidase {ECO:0000313|EMBL:CEP45914.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
hypothetical protein
L3_114_000G1_scaffold_10_17
unknown

Not on your lists

15179..15625
DNA (447bp) protein (149aa)

This feature has no annotations

L3_114_000G1_scaffold_10_18
Turicibacter sanguinis, Turicibacter, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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15737..16420
DNA (684bp) protein (228aa)
Transcriptional regulatory protein CutR n=2 Tax=Turicibacter RepID=F0HE74_9FIRM
Putative transcriptional regulatory protein CutR {ECO:0000313|EMBL:EFF63422.1}; TaxID=702450 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Turicibacter.;" source="Turicibacter sanguinis PC909.;"
cutR; transcriptional regulatory protein cutR
L3_114_000G1_scaffold_10_19
Turicibacter sanguinis, Turicibacter, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

16413..17603
DNA (1191bp) protein (397aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=702450 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Turicibacter.;" source="Turicibacter sanguinis PC909.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Turicibacter sp. HGF1 RepID=F0HE75_9FIRM
Signal transduction histidine kinase
L3_114_000G1_scaffold_10_20
Peptoniphilus sp. oral taxon 386, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17672..18262
DNA (591bp) protein (197aa)
Transcriptional regulator, TetR family n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MC72_9FIRM
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EFI41456.1}; TaxID=575609 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus sp. oral taxon 386 str. F0131.;"
TetR family transcriptional regulator
L3_114_000G1_scaffold_10_21
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18339..19001
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H241_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH97205.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
L3_114_000G1_scaffold_10_22
unknown

Not on your lists

comp(19116..19364)
DNA (249bp) protein (83aa)

This feature has no annotations

L3_114_000G1_scaffold_10_23
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19531..20061)
DNA (531bp) protein (177aa)
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KRB8_CLOPH
alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen {ECO:0000313|EMBL:ABX40586.1}; Flags: Precursor;; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
L3_114_000G1_scaffold_10_24
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20045..20980)
DNA (936bp) protein (312aa)
4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KRB7_CLOPH
4Fe-4S ferredoxin
4Fe-4S ferredoxin iron-sulfur binding domain protein {ECO:0000313|EMBL:ABX40585.1}; Flags: Precursor;; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
L3_114_000G1_scaffold_10_25
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21028..21642)
DNA (615bp) protein (205aa)
Putative uncharacterized protein n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KRB6_CLOPH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABX40584.1}; Flags: Precursor;; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
L3_114_000G1_scaffold_10_26
Clostridium sulfidigenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21804..22430
DNA (627bp) protein (209aa)
Transcriptional regulator, TetR family n=1 Tax=Clostridium botulinum (strain Loch Maree / Type A3) RepID=B1KZF3_CLOBM
TetR family transcriptional regulator {ECO:0000313|EMBL:KEZ88141.1}; TaxID=318464 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sulfidigenes.;"
TetR family transcriptional regulator
L3_114_000G1_scaffold_10_27
Clostridium sulfidigenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22430..23668
DNA (1239bp) protein (413aa)
Transporter, monovalent cation:proton antiporter-2 (CPA2) family n=1 Tax=Clostridium botulinum (strain Okra / Type B1) RepID=B1IJ77_CLOBK
Potassium transporter {ECO:0000313|EMBL:KEZ88142.1}; TaxID=318464 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sulfidigenes.;"
monovalent cation:proton antiporter-2 (CPA2) family protein
L3_114_000G1_scaffold_10_28
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23768..24901)
DNA (1134bp) protein (378aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KRB4_CLOPH
integral membrane sensor signal transduction histidine kinase
L3_114_000G1_scaffold_10_29
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24895..25578)
DNA (684bp) protein (228aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KRB5_CLOPH
two component transcriptional regulator
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ABX40583.1}; Flags: Precursor;; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
L3_114_000G1_scaffold_10_30
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25806..27749
DNA (1944bp) protein (648aa)
ABC transporter related n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KRB2_CLOPH
ABC transporter
ABC transporter related {ECO:0000313|EMBL:ABX40580.1}; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
Displaying items 1-30 of 265 in total

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