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L3_114_000G1_scaffold_16

Search features with annotation key words

Displaying items 1-30 of 335 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_000G1_scaffold_16_1
unknown

Not on your lists

1..552
DNA (552bp) protein (184aa)

This feature has no annotations

L3_114_000G1_scaffold_16_2
Clostridium sp. CAG:964, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

617..3337
DNA (2721bp) protein (907aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:964 RepID=R6U202_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC79718.1}; TaxID=1262848 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:964.;"
phage related protein
L3_114_000G1_scaffold_16_3
Clostridium sp. CAG:964, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3345..4235
DNA (891bp) protein (297aa)
Phage-related putative tail protein n=1 Tax=Clostridium sp. CAG:964 RepID=R6UHM6_9CLOT
Phage-related putative tail protein {ECO:0000313|EMBL:CDC79716.1}; TaxID=1262848 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:964.;"
phage-related tail protein
L3_114_000G1_scaffold_16_4
Clostridium sp. CAG:964, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4239..5432
DNA (1194bp) protein (398aa)
Phage related protein n=1 Tax=Clostridium sp. CAG:964 RepID=R6VAH8_9CLOT
Phage related protein {ECO:0000313|EMBL:CDC79712.1}; TaxID=1262848 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:964.;"
phage-like protein
L3_114_000G1_scaffold_16_5
Geobacillus sp. Y412MC52, Geobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

5576..7195
DNA (1620bp) protein (540aa)
Phage-related putative tail protein n=2 Tax=Geobacillus RepID=C9S1E7_GEOSY
phage-related tail protein
Phage-related putative tail protein {ECO:0000313|EMBL:ADU95282.1}; TaxID=550542 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Geobacillus.;" source="Geobacillus sp. (strain Y412MC52).;"
L3_114_000G1_scaffold_16_6
Paenibacillus sp. JCM 10914, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

7221..8006
DNA (786bp) protein (262aa)
hypothetical protein n=1 Tax=Geobacillus caldoxylosilyticus RepID=UPI000309FA84
Uncharacterized protein {ECO:0000313|EMBL:GAE09630.1}; TaxID=1236974 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. JCM 10914.;"
phage-related tail protein
L3_114_000G1_scaffold_16_7
unknown

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8019..8927
DNA (909bp) protein (303aa)

This feature has no annotations

L3_114_000G1_scaffold_16_8
unknown

Not on your lists

8983..9375
DNA (393bp) protein (131aa)

This feature has no annotations

L3_114_000G1_scaffold_16_9
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

9615..12452
DNA (2838bp) protein (946aa)
Putative uncharacterized protein id=4235831 bin=GWF2_Clostridiales_38_85 species=Clostridium methylpentosum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
hypothetical protein
Tax=GWF2_Clostridiales_38_85_curated
L3_114_000G1_scaffold_16_10
unknown

Not on your lists

12455..12730
DNA (276bp) protein (92aa)

This feature has no annotations

L3_114_000G1_scaffold_16_11
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12733..12861
DNA (129bp) protein (43aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IS10_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY43059.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L3_114_000G1_scaffold_16_12
Bacillus phage phi105, Lambdalikevirus, Caudovirales, Viruses

Not on your lists

12905..13957
DNA (1053bp) protein (351aa)
xlyA; bacteriophage PBSX N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28)
N-acetylmuramoyl-L-alanine amidase n=1 Tax=Bacillus phage phi105 RepID=Q9ZXD7_BPPH1
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:ADF59157.1}; ORF46 {ECO:0000313|EMBL:BAA36652.1}; TaxID=10717 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Siphoviridae; Lambdalikevirus; unclassified Lambda-like viruses.;" source="Bacillus phage phi105 (Bacteriophage phi-105).;"
L3_114_000G1_scaffold_16_13
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13961..14338
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5J222_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KJJ75432.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
hypothetical protein
L3_114_000G1_scaffold_16_14
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14335..14622
DNA (288bp) protein (96aa)
Holin, phage phi LC3 family n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P730_9FIRM
Holin, phage phi LC3 family {ECO:0000313|EMBL:EDS13005.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
hypothetical protein
L3_114_000G1_scaffold_16_15
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14861..17242
DNA (2382bp) protein (794aa)
E1-E2 ATPase n=1 Tax=Clostridium sp. CAG:352 RepID=R6S345_9CLOT
E1-E2 ATPase {ECO:0000313|EMBL:CDC41037.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
P-type HAD superfamily ATPase
L3_114_000G1_scaffold_16_16
Bacteroides sp. CAG:661, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17392..18042
DNA (651bp) protein (217aa)
conserved hypothetical protein (EC:3.1.3.-)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:661 RepID=R5SLD3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ47496.1}; TaxID=1262746 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:661.;"
L3_114_000G1_scaffold_16_17
Clostridium sp. CAG:470, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18174..18695
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:470 RepID=R7FI38_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE14286.1}; TaxID=1262812 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:470.;"
hypothetical protein
L3_114_000G1_scaffold_16_18
unknown

Not on your lists

comp(18805..19221)
DNA (417bp) protein (139aa)

This feature has no annotations

L3_114_000G1_scaffold_16_19
Desulfotomaculum gibsoniae, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19409..20377
DNA (969bp) protein (323aa)
Biotin synthase {ECO:0000256|HAMAP-Rule:MF_01694, ECO:0000256|SAAS:SAAS00009987}; EC=2.8.1.6 {ECO:0000256|HAMAP-Rule:MF_01694, ECO:0000256|SAAS:SAAS00250466};; TaxID=767817 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum gibsoniae DSM 7213.;"
hypothetical protein n=1 Tax=Blautia producta RepID=UPI0003728CFC
biotin synthetase
L3_114_000G1_scaffold_16_20
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20379..20702)
DNA (324bp) protein (108aa)
DNA-binding helix-turn-helix protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2CMT9_9CLOT
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:ERI68636.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
Helix-turn-helix.
L3_114_000G1_scaffold_16_21
unknown

Not on your lists

20857..21123
DNA (267bp) protein (89aa)

This feature has no annotations

L3_114_000G1_scaffold_16_22
Desulfococcus oleovorans, Desulfococcus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21226..21750)
DNA (525bp) protein (175aa)
Cob(I)alamin adenosyltransferase n=1 Tax=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) RepID=A8ZY27_DESOH
cob(I)alamin adenosyltransferase
Cob(I)alamin adenosyltransferase {ECO:0000313|EMBL:ABW67034.1}; TaxID=96561 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfococcus.;" source="Desulfococcus oleovorans (strain DSM 6200 / Hxd3).;"
L3_114_000G1_scaffold_16_23
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21925..22668)
DNA (744bp) protein (248aa)
Peptidase, M23 family n=2 Tax=Clostridium RepID=A7VP51_9CLOT
Peptidase, M23 family {ECO:0000313|EMBL:EDO62931.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
peptidase M23
L3_114_000G1_scaffold_16_24
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23216..24640)
DNA (1425bp) protein (475aa)
Amidophosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; Glutamine phosphoribosylpyrophosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
Amidophosphoribosyltransferase n=1 Tax=Clostridium leptum DSM 753 RepID=A7VXA6_9CLOT
amidophosphoribosyltransferase
L3_114_000G1_scaffold_16_25
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

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comp(24794..25519)
DNA (726bp) protein (242aa)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194445}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194458};; SAICAR synthetase {ECO:0000256|HAMAP-Rule:MF_00137}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
purC; Phosphoribosylaminoimidazole-succinocarboxamidesynthase (EC:6.3.2.6)
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6M3G9_9FIRM
L3_114_000G1_scaffold_16_26
Eubacterium sp. CAG:252, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25687..26901)
DNA (1215bp) protein (405aa)
LL-diaminopimelate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01642}; Short=DAP-AT {ECO:0000256|HAMAP-Rule:MF_01642};; Short=DAP-aminotransferase {ECO:0000256|HAMAP-Rule:MF_01642};; Short=LL-DAP-aminotransferase {ECO:0000256|HAMAP-Rule:MF_01642};; EC=2.6.1.83 {ECO:0000256|HAMAP-Rule:MF_01642};; TaxID=1262887 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:252.;"
LL-diaminopimelate aminotransferase n=1 Tax=Eubacterium sp. CAG:248 RepID=R6K5B4_9FIRM
L,L-diaminopimelate aminotransferase
L3_114_000G1_scaffold_16_27
Ruminiclostridium thermocellum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26993..27826)
DNA (834bp) protein (278aa)
diaminopimelate epimerase (EC:5.1.1.7)
Diaminopimelate epimerase {ECO:0000255|HAMAP-Rule:MF_00197}; Short=DAP epimerase {ECO:0000255|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000255|HAMAP-Rule:MF_00197};; TaxID=203119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium thermocellum (strain ATCC 27405 / DSM 1237 / NBRC 103400 /; NCIMB 10682 / NRRL B-4536 / VPI 7372) (Ruminiclostridium; thermocellum).;"
Diaminopimelate epimerase n=7 Tax=Clostridium thermocellum RepID=DAPF_CLOTH
L3_114_000G1_scaffold_16_28
Dorea formicigenerans CAG:28, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28101..28775)
DNA (675bp) protein (225aa)
ANTAR domain protein n=3 Tax=Dorea RepID=B0G1Z3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC55038.1}; TaxID=1263073 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea formicigenerans CAG:28.;"
ANTAR domain-containing protein
L3_114_000G1_scaffold_16_29
Coprococcus catus, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29089..32286)
DNA (3198bp) protein (1066aa)
carbamoyl-phosphate synthase large subunit (EC:6.3.5.5)
Carbamoyl-phosphate synthase large chain {ECO:0000256|HAMAP-Rule:MF_01210}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01210, ECO:0000313|EMBL:CBK81779.1};; Carbamoyl-phosphate synthetase ammonia chain {ECO:0000256|HAMAP-Rule:MF_01210}; TaxID=717962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus catus GD/7.;"
Carbamoyl-phosphate synthase large chain n=1 Tax=Coprococcus catus GD/7 RepID=D4JBQ8_9FIRM
L3_114_000G1_scaffold_16_30
Blautia sp. CAG:52, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32279..33361)
DNA (1083bp) protein (361aa)
Carbamoyl-phosphate synthase small chain {ECO:0000256|HAMAP-Rule:MF_01209}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01209};; Carbamoyl-phosphate synthetase glutamine chain {ECO:0000256|HAMAP-Rule:MF_01209}; TaxID=1262758 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:52.;"
carbamoyl-phosphate synthase, small subunit (EC:6.3.5.5)
Carbamoyl-phosphate synthase small chain n=1 Tax=Blautia sp. CAG:52 RepID=R6GKQ8_9FIRM
Displaying items 1-30 of 335 in total

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