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L3_114_000G1_scaffold_60

Search features with annotation key words

Displaying items 1-30 of 141 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_000G1_scaffold_60_1
unknown

Not on your lists

comp(2..64)
DNA (63bp) protein (21aa)

This feature has no annotations

L3_114_000G1_scaffold_60_2
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(135..2078)
DNA (1944bp) protein (648aa)
Glucan endo-1,3-beta-D-glucosidase {ECO:0000313|EMBL:ADZ85657.1}; EC=3.2.1.39 {ECO:0000313|EMBL:ADZ85657.1};; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
Glucan endo-1,3-beta-D-glucosidase n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JKE2_CELLD
S-layer domain-containing protein
L3_114_000G1_scaffold_60_3
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2271..3278)
DNA (1008bp) protein (336aa)
galE; UDP-glucose 4-epimerase (EC:5.1.3.2 5.1.3.7)
UDP-glucose 4-epimerase n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9LLC6_9FIRM
UDP-glucose 4-epimerase {ECO:0000313|EMBL:EOS59156.1}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
L3_114_000G1_scaffold_60_4
Fervidicella metallireducens, Fervidicella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3470..4030)
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Cetobacterium somerae ATCC BAA-474 RepID=U7V8V4_9FUSO
Uncharacterized protein {ECO:0000313|EMBL:EYE87753.1}; TaxID=1403537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Fervidicella.;" source="Fervidicella metallireducens AeB.;"
hypothetical protein
L3_114_000G1_scaffold_60_5
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4196..5941)
DNA (1746bp) protein (582aa)
Polysaccharide deacetylase n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JIN4_CELLD
polysaccharide deacetylase
Polysaccharide deacetylase {ECO:0000313|EMBL:ADZ85504.1}; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
L3_114_000G1_scaffold_60_6
Caldicellulosiruptor hydrothermalis, Caldicellulosiruptor, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5952..7088)
DNA (1137bp) protein (379aa)
NUDIX hydrolase n=1 Tax=Caldicellulosiruptor hydrothermalis (strain DSM 18901 / VKM B-2411 / 108) RepID=E4Q9D0_CALH1
nudix hydrolase
NUDIX hydrolase {ECO:0000313|EMBL:ADQ05801.1}; TaxID=632292 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Caldicellulosiruptor.;" source="Caldicellulosiruptor hydrothermalis (strain DSM 18901 / VKM B-2411 /; 108).;"
L3_114_000G1_scaffold_60_7
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7110..8162)
DNA (1053bp) protein (351aa)
dTDP-glucose 4,6-dehydratase (EC:4.2.1.46)
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
dTDP-glucose 4,6-dehydratase n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JIK7_CELLD
L3_114_000G1_scaffold_60_8
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8244..9392)
DNA (1149bp) protein (383aa)
UDP-N-acetylglucosamine 2-epimerase (EC:5.1.3.14)
UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:ADZ85312.1}; EC=5.1.3.14 {ECO:0000313|EMBL:ADZ85312.1};; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
UDP-N-acetylglucosamine 2-epimerase n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JGX2_CELLD
L3_114_000G1_scaffold_60_9
Lachnospiraceae bacterium 28-4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9380..10795)
DNA (1416bp) protein (472aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 28-4 RepID=R9J8Z8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS30679.1}; TaxID=397287 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 28-4.;"
L3_114_000G1_scaffold_60_10
Lachnospiraceae bacterium 28-4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10820..13279)
DNA (2460bp) protein (820aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 28-4 RepID=R9J8Z2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS30674.1}; TaxID=397287 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 28-4.;"
heparinase II/III-like family protein
L3_114_000G1_scaffold_60_11
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13334..15238)
DNA (1905bp) protein (635aa)
Methyltransferase FkbM family protein n=1 Tax=Campylobacter coli 111-3 RepID=H7QUU9_CAMCO
Glycosyl transferases group 1 family protein {ECO:0000313|EMBL:AIY81850.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.;"
glycosyltransferase, family 1
L3_114_000G1_scaffold_60_12
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15248..17827)
DNA (2580bp) protein (860aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HCE5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH96765.2}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
bifunctional hypothetical protein/glycosyltransferase
L3_114_000G1_scaffold_60_13
Bacillus cereus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(17841..19064)
DNA (1224bp) protein (408aa)
FkbM family methyltransferase n=1 Tax=Bacillus cereus VD107 RepID=J8JDW0_BACCE
FkbM family methyltransferase {ECO:0000313|EMBL:EJR48955.1}; TaxID=1053229 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus cereus VD107.;"
hypothetical protein
L3_114_000G1_scaffold_60_14
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19069..20250)
DNA (1182bp) protein (394aa)
Glycosyl transferase group 1 n=1 Tax=Bacillus thuringiensis serovar monterrey BGSC 4AJ1 RepID=C3F9X1_BACTU
Glycosyl transferase {ECO:0000313|EMBL:KJU72351.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
wbpH; group 1 glycosyl transferase
L3_114_000G1_scaffold_60_15
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20247..21002)
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5VF79_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79392.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
TagH; polysaccharide ABC transporter
L3_114_000G1_scaffold_60_16
Spirochaeta smaragdinae, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(21004..21789)
DNA (786bp) protein (262aa)
hypothetical protein n=1 Tax=Spirochaeta bajacaliforniensis RepID=UPI00037A013C
ABC transporter
ABC-2 type transporter {ECO:0000313|EMBL:ADK79807.1}; TaxID=573413 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228).;"
L3_114_000G1_scaffold_60_17
Bacillus thuringiensis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(21761..23035)
DNA (1275bp) protein (425aa)
Uncharacterized protein n=1 Tax=Bacillus thuringiensis subsp. konkukian (strain 97-27) RepID=Q6HB14_BACHK
glycosyl transferase family protein
Uncharacterized protein {ECO:0000313|EMBL:AAT61144.1}; TaxID=281309 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus thuringiensis subsp. konkukian (strain 97-27).;"
L3_114_000G1_scaffold_60_18
Exiguobacterium sp. AB2, Exiguobacterium, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(23113..24372)
DNA (1260bp) protein (420aa)
nucleotide sugar dehydrogenase (EC:1.1.1.22)
Nucleotide sugar dehydrogenase n=1 Tax=Exiguobacterium sp. (strain ATCC BAA-1283 / AT1b) RepID=C4L6G1_EXISA
UDP-N-acetyl-D-mannosamine dehydrogenase {ECO:0000313|EMBL:KDN58525.1}; TaxID=1484479 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillales Family XII. Incertae Sedis; Exiguobacterium.;" source="Exiguobacterium sp. AB2.;"
L3_114_000G1_scaffold_60_19
Paenibacillus sp. FSL H7-0737, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(24396..25466)
DNA (1071bp) protein (357aa)
hypothetical protein n=1 Tax=Paenibacillus daejeonensis RepID=UPI00037370D2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIQ23119.1}; TaxID=1536775 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. FSL H7-0737.;"
L3_114_000G1_scaffold_60_20
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25468..26739)
DNA (1272bp) protein (424aa)
Type 12 methyltransferase n=1 Tax=Nitratireductor indicus C115 RepID=K2P1Q0_9RHIZ
Type 12 methyltransferase {ECO:0000313|EMBL:EKF41301.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
methyltransferase
L3_114_000G1_scaffold_60_21
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26898..28295
DNA (1398bp) protein (466aa)
UDP-phosphate glucose phosphotransferase (EC:2.7.8.6)
Undecaprenyl-phosphate glucose phosphotransferase {ECO:0000313|EMBL:ADZ85499.1}; EC=2.7.8.6 {ECO:0000313|EMBL:ADZ85499.1};; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
Undecaprenyl-phosphate glucose phosphotransferase n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JIM9_CELLD
L3_114_000G1_scaffold_60_22
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28364..30262)
DNA (1899bp) protein (633aa)
O-antigen polymerase n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JIM8_CELLD
O-antigen polymerase
O-antigen polymerase {ECO:0000313|EMBL:ADZ85498.1}; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
L3_114_000G1_scaffold_60_23
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30394..32574)
DNA (2181bp) protein (727aa)
Copper amine oxidase-like domain-containing protein n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JIN3_CELLD
copper amine oxidase-like domain-containing protein
Copper amine oxidase-like domain-containing protein {ECO:0000313|EMBL:ADZ85503.1}; Flags: Precursor;; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
L3_114_000G1_scaffold_60_24
Cellulosilyticum ruminicola, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32702..33853)
DNA (1152bp) protein (384aa)
Protease inhibitor (Fragment) n=1 Tax=Cellulosilyticum ruminicola RepID=D2KFJ9_9FIRM
Protease inhibitor {ECO:0000313|EMBL:ACZ98601.1}; Flags: Fragment;; TaxID=425254 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum ruminicola.;"
copper amine oxidase domain protein
L3_114_000G1_scaffold_60_25
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33996..36077)
DNA (2082bp) protein (694aa)
Copper amine oxidase-like domain-containing protein n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JIN3_CELLD
copper amine oxidase-like domain-containing protein
Copper amine oxidase-like domain-containing protein {ECO:0000313|EMBL:ADZ85503.1}; Flags: Precursor;; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
L3_114_000G1_scaffold_60_26
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36262..38376)
DNA (2115bp) protein (705aa)
Copper amine oxidase-like domain-containing protein n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JIN3_CELLD
copper amine oxidase-like domain-containing protein
Copper amine oxidase-like domain-containing protein {ECO:0000313|EMBL:ADZ85503.1}; Flags: Precursor;; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
L3_114_000G1_scaffold_60_27
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(38864..39733)
DNA (870bp) protein (290aa)
UTP-glucose-1-phosphate uridylyltransferase (EC:2.7.7.9)
UTP--glucose-1-phosphate uridylyltransferase {ECO:0000256|RuleBase:RU361259}; EC=2.7.7.9 {ECO:0000256|RuleBase:RU361259};; UDP-glucose pyrophosphorylase {ECO:0000256|RuleBase:RU361259}; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
UTP-glucose-1-phosphate uridylyltransferase n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JIN7_CELLD
L3_114_000G1_scaffold_60_28
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(39790..40275)
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JIN8_CELLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADZ85508.1}; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
L3_114_000G1_scaffold_60_29
Eubacterium sp. CAG:274, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(40304..41110)
DNA (807bp) protein (269aa)
Glutamate racemase {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00031911}; EC=5.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00041166};; TaxID=1262888 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:274.;"
glutamate racemase (EC:5.1.1.3)
glutamate racemase n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016C0C71
L3_114_000G1_scaffold_60_30
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(41121..42170)
DNA (1050bp) protein (350aa)
D-alanine/D-alanine ligase (EC:6.3.2.4)
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000256|HAMAP-Rule:MF_00047}; D-alanylalanine synthetase {ECO:0000256|HAMAP-Rule:MF_00047}; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
D-alanine--D-alanine ligase n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JIN9_CELLD
Displaying items 1-30 of 141 in total

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