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L3_114_000G1_scaffold_62

Search features with annotation key words

Displaying items 1-30 of 156 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_000G1_scaffold_62_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3..155)
DNA (153bp) protein (51aa)
AraC family DNA-binding response regulator n=1 Tax=Clostridium perfringens F262 RepID=H7CYB3_CLOPF
AraC family DNA-binding response regulator
DNA-binding response regulator, AraC family {ECO:0000313|EMBL:EDT15254.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_114_000G1_scaffold_62_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(160..1896)
DNA (1737bp) protein (579aa)
Sensor histidine kinase n=7 Tax=Clostridium perfringens RepID=H7CYB4_CLOPF
Sensor histidine kinase {ECO:0000313|EMBL:EIA16292.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
sensor histidine kinase
L3_114_000G1_scaffold_62_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2118..2795
DNA (678bp) protein (226aa)
Putative membrane protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BSJ7_CLOPF
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:EDT15316.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_114_000G1_scaffold_62_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3061..4398
DNA (1338bp) protein (446aa)
FemAB family protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BSJ8_CLOPF
FemAB family protein
FemAB family protein {ECO:0000313|EMBL:EDT15291.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_114_000G1_scaffold_62_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4760..5065
DNA (306bp) protein (102aa)
PadR family transcriptional regulator n=11 Tax=Clostridium perfringens RepID=H7CYB7_CLOPF
PadR family transcriptional regulator
PadR family transcriptional regulator {ECO:0000313|EMBL:EIA16295.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_114_000G1_scaffold_62_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5112..5849)
DNA (738bp) protein (246aa)
Phosphate ABC transporter ATP-binding protein n=8 Tax=Clostridium perfringens RepID=H7CYB8_CLOPF
amino acid ABC transporter
Phosphate ABC transporter ATP-binding protein {ECO:0000313|EMBL:EIA16296.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_114_000G1_scaffold_62_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5868..7376)
DNA (1509bp) protein (503aa)
His/Glu/Gln/Arg/opine amino acid ABC transporter amino acid-binding protein/permease n=8 Tax=Clostridium perfringens RepID=H7CYB9_CLOPF
His/Glu/Gln/Arg/opine amino acid ABC transporter amino acid-binding protein/permease
Amino acid ABC transporter, amino acid-binding protein/permease protein, His/Glu/Gln/Arg/opine family {ECO:0000313|EMBL:EDT15314.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_114_000G1_scaffold_62_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7549..8328
DNA (780bp) protein (260aa)
Iron-sulfur cluster-binding protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BSK2_CLOPF
Iron-sulfur cluster-binding protein {ECO:0000313|EMBL:EDT15324.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
(Fe-S)-binding protein
L3_114_000G1_scaffold_62_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8462..8878)
DNA (417bp) protein (139aa)
Uncharacterized protein n=9 Tax=Clostridium perfringens RepID=H7CYC1_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT15293.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_114_000G1_scaffold_62_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9384..10205)
DNA (822bp) protein (274aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BSK4_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT15294.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
hypothetical protein
L3_114_000G1_scaffold_62_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10224..11480)
DNA (1257bp) protein (419aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BSK5_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT15298.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
hypothetical protein
L3_114_000G1_scaffold_62_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11596..13044)
DNA (1449bp) protein (483aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
Sensor histidine kinase n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BSK6_CLOPF
virJ; two-component sensor histidine kinase
L3_114_000G1_scaffold_62_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13034..13849)
DNA (816bp) protein (272aa)
DNA-binding response regulator n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BSK7_CLOPF
DNA-binding response regulator {ECO:0000313|EMBL:EDT15287.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
virI; DNA-binding response regulator
L3_114_000G1_scaffold_62_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13933..14328)
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BSK8_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT15271.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
hypothetical protein
L3_114_000G1_scaffold_62_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14461..14751)
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BSK9_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT15328.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
hypothetical protein
L3_114_000G1_scaffold_62_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14763..16520)
DNA (1758bp) protein (586aa)
Helicase domain protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BSL0_CLOPF
Helicase domain protein {ECO:0000313|EMBL:EDT15299.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
helicase
L3_114_000G1_scaffold_62_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16783..17643
DNA (861bp) protein (287aa)
Putative ribosomal protein L11 methyltransferase n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BSL1_CLOPF
Putative ribosomal protein L11 methyltransferase {ECO:0000313|EMBL:EDT15318.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
50S ribosomal protein L11 methyltransferase
L3_114_000G1_scaffold_62_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18047..18562)
DNA (516bp) protein (172aa)
Putative membrane protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BSL2_CLOPF
Putative membrane protein {ECO:0000313|EMBL:EDT15322.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
hypothetical protein
L3_114_000G1_scaffold_62_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18580..18954)
DNA (375bp) protein (125aa)
Uncharacterized protein n=3 Tax=Clostridium perfringens RepID=B1BSL3_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT73274.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
L3_114_000G1_scaffold_62_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18955..19986)
DNA (1032bp) protein (344aa)
Putative thiamin biosynthesis lipoprotein ApbE n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BSL4_CLOPF
Putative thiamin biosynthesis lipoprotein ApbE {ECO:0000313|EMBL:EDT15290.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
thiamin biosynthesis lipoprotein ApbE
L3_114_000G1_scaffold_62_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20158..23400)
DNA (3243bp) protein (1081aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BSL5_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT15249.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
hypothetical protein
L3_114_000G1_scaffold_62_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23413..24459)
DNA (1047bp) protein (349aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BSL6_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT15320.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
hypothetical protein
L3_114_000G1_scaffold_62_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24659..25108)
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BSL7_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT15327.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
hypothetical protein
L3_114_000G1_scaffold_62_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25396..26817
DNA (1422bp) protein (474aa)
Major facilitator family transporter n=6 Tax=Clostridium perfringens RepID=Q0TNK0_CLOP1
major facilitator family transporter
Major facilitator family transporter {ECO:0000313|EMBL:EDT15326.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_114_000G1_scaffold_62_25
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26941..28695)
DNA (1755bp) protein (585aa)
Subtilase family protein {ECO:0000313|EMBL:EDT15265.1}; EC=3.4.21.- {ECO:0000313|EMBL:EDT15265.1};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
Subtilase family protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BSL9_CLOPF
subtilase
L3_114_000G1_scaffold_62_26
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28697..30295)
DNA (1599bp) protein (533aa)
Subtilase family protein {ECO:0000313|EMBL:EDT15264.1}; EC=3.4.21.- {ECO:0000313|EMBL:EDT15264.1};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
Subtilase family protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BSM0_CLOPF
hypothetical protein
L3_114_000G1_scaffold_62_27
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30766..32121)
DNA (1356bp) protein (452aa)
23S rRNA-methyltransferase RumA {ECO:0000313|EMBL:EDT15255.1}; EC=2.1.1.- {ECO:0000313|EMBL:EDT15255.1};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
rumA; 23S rRNA (uracil-5-)-methyltransferase RumA (EC:2.1.1.-)
23S rRNA-methyltransferase RumA n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BSM1_CLOPF
L3_114_000G1_scaffold_62_28
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32149..32598)
DNA (450bp) protein (150aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=H7CYE0_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA16318.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_114_000G1_scaffold_62_29
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32785..34692)
DNA (1908bp) protein (636aa)
Selenocysteine-specific translation elongation factor n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BSM3_CLOPF
Selenocysteine-specific translation elongation factor {ECO:0000313|EMBL:EDT15308.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
selB; selenocysteine-specific translation elongation factor
L3_114_000G1_scaffold_62_30
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34693..36081)
DNA (1389bp) protein (463aa)
L-seryl-tRNA(Sec) selenium transferase {ECO:0000256|HAMAP-Rule:MF_00423, ECO:0000256|SAAS:SAAS00029253}; EC=2.9.1.1 {ECO:0000256|HAMAP-Rule:MF_00423, ECO:0000256|SAAS:SAAS00029254};; Selenocysteine synthase {ECO:0000256|HAMAP-Rule:MF_00423}; Selenocysteinyl-tRNA(Sec) synthase {ECO:0000256|HAMAP-Rule:MF_00423}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
selA; selenocysteine synthase (EC:2.9.1.1)
L-seryl-tRNA(Sec) selenium transferase n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BSM4_CLOPF
Displaying items 1-30 of 156 in total

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