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L3_114_000G1_scaffold_74

Search features with annotation key words

Displaying items 1-30 of 146 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_000G1_scaffold_74_1
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..1012
DNA (1011bp) protein (337aa)
pyruvate formate-lyase (EC:2.3.1.54)
Pyruvate formate-lyase {ECO:0000313|EMBL:KKC65144.1}; EC=2.3.1.54 {ECO:0000313|EMBL:KKC65144.1};; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus.;"
Formate acetyltransferase 1 n=2 Tax=Citrobacter RepID=R8VF10_9ENTR
L3_114_000G1_scaffold_74_2
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1203..1943
DNA (741bp) protein (247aa)
Pyruvate formate-lyase-activating enzyme {ECO:0000256|RuleBase:RU362053}; EC=1.97.1.4 {ECO:0000256|RuleBase:RU362053};; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus.;"
pflA; pyruvate formate lyase-activating enzyme 1 (EC:1.97.1.4)
Pyruvate formate-lyase 1-activating enzyme n=11 Tax=Citrobacter RepID=D4BBW4_9ENTR
L3_114_000G1_scaffold_74_3
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2041..2832
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Citrobacter sp. 30_2 RepID=C1M9I6_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:ETX64143.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
hypothetical protein
L3_114_000G1_scaffold_74_4
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2881..4302)
DNA (1422bp) protein (474aa)
Inner membrane transporter ycaM n=8 Tax=Citrobacter RepID=C1M9I5_9ENTR
Inner membrane transporter ycaM {ECO:0000313|EMBL:ETX64142.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
inner membrane transporter YcaM
L3_114_000G1_scaffold_74_5
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4516..5664)
DNA (1149bp) protein (383aa)
Uncharacterized MFS-type transporter YcaD n=1 Tax=Shigella flexneri 1235-66 RepID=I6HBQ8_SHIFL
Uncharacterized MFS-type transporter YcaD {ECO:0000256|HAMAP-Rule:MF_01149}; TaxID=766154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri 1235-66.;"
MFS transporter
L3_114_000G1_scaffold_74_6
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5945..6808)
DNA (864bp) protein (288aa)
Anaerobic dimethyl sulfoxide reductase chain C DMSO reductase anchor subunit n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3CVP6_CITFR
dimethyl sulfoxide reductase
Anaerobic dimethyl sulfoxide reductase chain C {ECO:0000313|EMBL:ETX70284.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
L3_114_000G1_scaffold_74_7
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6810..7427)
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Citrobacter amalonaticus Y19 RepID=M1K6W8_CITAM
Anaerobic dimethyl sulfoxide reductase subunit B {ECO:0000313|EMBL:GAL49190.1}; Putative dimethyl sulfoxide reductase subunit YnfG {ECO:0000313|EMBL:GAL48655.1}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
anaerobic dimethylsulfoxide reductase subunit B
L3_114_000G1_scaffold_74_8
Citrobacter sp. CIP 55.13, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7438..9882)
DNA (2445bp) protein (815aa)
Anaerobic dimethyl sulfoxide reductase chain A {ECO:0000313|EMBL:CEJ67413.1}; EC=1.8.5.3 {ECO:0000313|EMBL:CEJ67413.1};; TaxID=1563222 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. CIP 55.13.;"
Anaerobic dimethyl sulfoxide reductase chain A n=1 Tax=Shigella flexneri 1235-66 RepID=I6HBR1_SHIFL
dimethyl sulfoxide reductase
L3_114_000G1_scaffold_74_9
Citrobacter sp. CIP 55.13, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10112..11404)
DNA (1293bp) protein (431aa)
Serine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00176}; EC=6.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00176};; Seryl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; Seryl-tRNA(Ser/Sec) synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; TaxID=1563222 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. CIP 55.13.;"
Serine--tRNA ligase n=4 Tax=Enterobacteriaceae RepID=I6HBR2_SHIFL
seryl-tRNA synthetase
L3_114_000G1_scaffold_74_10
Citrobacter sp. CIP 55.13, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(11497..12840)
DNA (1344bp) protein (448aa)
Replication-associated recombination protein A n=1 Tax=Shigella flexneri 1235-66 RepID=I6HBR3_SHIFL
FIG065221: Holliday junction DNA helicase {ECO:0000313|EMBL:CEJ67411.1}; TaxID=1563222 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. CIP 55.13.;"
recombination factor protein RarA
L3_114_000G1_scaffold_74_11
Citrobacter sp. CIP 55.13, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(12851..13462)
DNA (612bp) protein (204aa)
Outer-membrane lipoprotein carrier protein n=7 Tax=Citrobacter RepID=C1M9H7_9ENTR
Outer-membrane lipoprotein carrier protein {ECO:0000256|HAMAP-Rule:MF_00240, ECO:0000256|SAAS:SAAS00028972}; Flags: Precursor;; TaxID=1563222 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. CIP 55.13.;"
lolA; lipoprotein chaperone
L3_114_000G1_scaffold_74_12
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(13574..17533)
DNA (3960bp) protein (1320aa)
Cell division protein n=5 Tax=Shigella sonnei RepID=Q3Z3N0_SHISS
cell division protein FtsK
Cell division protein FtsK {ECO:0000313|EMBL:AHY12679.1}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
L3_114_000G1_scaffold_74_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(17668..18162)
DNA (495bp) protein (165aa)
Leucine-responsive regulatory protein n=1422 Tax=Enterobacteriaceae RepID=LRP_ECO57
lrp; leucine-responsive transcriptional regulator
Leucine-responsive regulatory protein {ECO:0000313|EMBL:EZK03163.1}; TaxID=1444134 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1-182-04_S3_C1.;"
L3_114_000G1_scaffold_74_14
Citrobacter werkmanii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18747..19715
DNA (969bp) protein (323aa)
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; TaxID=1114921 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter werkmanii NBRC 105721.;"
Thioredoxin reductase n=1 Tax=Citrobacter freundii 4_7_47CFAA RepID=G9SHG7_CITFR
thioredoxin reductase
L3_114_000G1_scaffold_74_15
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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19830..21596
DNA (1767bp) protein (589aa)
ATP-binding/permease CydD n=2 Tax=Citrobacter RepID=C1M9H2_9ENTR
ATP-binding/permease CydD {ECO:0000313|EMBL:ETX70275.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
amino acid ABC transporter permease
L3_114_000G1_scaffold_74_16
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21597..23318
DNA (1722bp) protein (574aa)
ATP-binding/permease CydC n=1 Tax=Citrobacter sp. KTE30 RepID=R8V0B4_9ENTR
ATP-binding/permease CydC {ECO:0000313|EMBL:ETX64129.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
amino acid ABC transporter permease
L3_114_000G1_scaffold_74_17
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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23362..24066
DNA (705bp) protein (235aa)
Leucyl/phenylalanyl-tRNA--protein transferase {ECO:0000256|HAMAP-Rule:MF_00688, ECO:0000256|SAAS:SAAS00088489}; EC=2.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00688, ECO:0000256|SAAS:SAAS00088482};; L/F-transferase {ECO:0000256|HAMAP-Rule:MF_00688}; Leucyltransferase {ECO:0000256|HAMAP-Rule:MF_00688}; Phenyalanyltransferase {ECO:0000256|HAMAP-Rule:MF_00688}; TaxID=1439318 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii MGH 56.;"
aat; leucyl/phenylalanyl-tRNA--protein transferase (EC:2.3.2.6)
Leucyl/phenylalanyl-tRNA--protein transferase n=1 Tax=Citrobacter sp. 30_2 RepID=C1M9H0_9ENTR
L3_114_000G1_scaffold_74_18
Pantoea vagans, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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24352..24570
DNA (219bp) protein (73aa)
Translation initiation factor IF-1 n=256 Tax=cellular organisms RepID=IF1_ENT38
infA; translation initiation factor IF-1
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=712898 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea vagans (strain C9-1) (Pantoea agglomerans (strain C9-1)).;"
L3_114_000G1_scaffold_74_19
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24649..25560)
DNA (912bp) protein (304aa)
LysR family transcriptional regulator n=2 Tax=Citrobacter RepID=M3CC57_CITFR
Uncharacterized protein {ECO:0000313|EMBL:KDF21258.1}; TaxID=1439318 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii MGH 56.;"
LysR family transcriptional regulator
L3_114_000G1_scaffold_74_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25669..26529
DNA (861bp) protein (287aa)
Pirin-related protein n=3 Tax=Citrobacter RepID=J0M2Z0_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:CDL37197.1}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
quercetin 2,3-dioxygenase
L3_114_000G1_scaffold_74_21
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26546..27223
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Citrobacter sp. KTE32 RepID=R8VEY2_9ENTR
Nicotinamidase {ECO:0000313|EMBL:KKC65288.1}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus.;"
nicotinamidase
L3_114_000G1_scaffold_74_22
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27598..28725)
DNA (1128bp) protein (376aa)
23S rRNA (uracil(747)-C(5))-methyltransferase RlmC {ECO:0000256|HAMAP-Rule:MF_01012, ECO:0000256|SAAS:SAAS00055322}; EC=2.1.1.189 {ECO:0000256|HAMAP-Rule:MF_01012, ECO:0000256|SAAS:SAAS00055340};; 23S rRNA(m5U747)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01012}; TaxID=1439318 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii MGH 56.;"
23S rRNA (uracil(747)-C(5))-methyltransferase RlmC n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QXE0_CITFR
rumB; 23S rRNA methyltransferase
L3_114_000G1_scaffold_74_23
Citrobacter youngae, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28766..29275)
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Citrobacter youngae ATCC 29220 RepID=D4BC02_9ENTR
membrane protein
Uncharacterized protein {ECO:0000313|EMBL:EFE08620.1}; TaxID=500640 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter youngae ATCC 29220.;"
L3_114_000G1_scaffold_74_24
Citrobacter sp. KTE151, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(29312..30157)
DNA (846bp) protein (282aa)
Putrescine transport system permease potI n=2 Tax=Citrobacter RepID=R8VK94_9ENTR
Putrescine transport system permease potI {ECO:0000313|EMBL:EOQ50496.1}; TaxID=1169322 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. KTE151.;"
spermidine/putrescine ABC transporter permease
L3_114_000G1_scaffold_74_25
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30154..31107)
DNA (954bp) protein (318aa)
Putrescine transport system permease potH n=3 Tax=Citrobacter RepID=C1M9G0_9ENTR
Putrescine transport system permease potH {ECO:0000313|EMBL:ETX64120.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
spermidine/putrescine ABC transporter permease
L3_114_000G1_scaffold_74_26
Citrobacter sp. CIP 55.13, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31117..32250)
DNA (1134bp) protein (378aa)
Polyamine-transporting ATPase {ECO:0000256|SAAS:SAAS00083160}; EC=3.6.3.31 {ECO:0000256|SAAS:SAAS00083160};; TaxID=1563222 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. CIP 55.13.;"
Putrescine transporter ATP-binding subunit n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3BH73_CITFR
potG; putrescine transporter ATP-binding subunit
L3_114_000G1_scaffold_74_27
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32388..33500)
DNA (1113bp) protein (371aa)
Putrescine-binding periplasmic protein n=5 Tax=Citrobacter RepID=J0M9Q3_9ENTR
Putrescine-binding periplasmic protein {ECO:0000256|PIRNR:PIRNR019574}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
spermidine/putrescine ABC transporter substrate-binding protein
L3_114_000G1_scaffold_74_28
Citrobacter youngae, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33932..34408)
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Citrobacter sp. 30_2 RepID=C1M9F7_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:EFE08625.1}; TaxID=500640 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter youngae ATCC 29220.;"
hypothetical protein
L3_114_000G1_scaffold_74_29
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34499..35401)
DNA (903bp) protein (301aa)
Probable alpha-L-glutamate ligase {ECO:0000256|HAMAP-Rule:MF_01552}; EC=6.3.2.- {ECO:0000256|HAMAP-Rule:MF_01552};; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
Ribosomal protein S6 modification protein n=5 Tax=Citrobacter RepID=J1G704_9ENTR
ribosomal protein S6 modification protein
L3_114_000G1_scaffold_74_30
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35461..36183)
DNA (723bp) protein (241aa)
Nitroreductase A n=3 Tax=Citrobacter RepID=K8QTX9_CITFR
nitroreductase A
Nitroreductase A {ECO:0000313|EMBL:AHY12661.1}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
Displaying items 1-30 of 146 in total

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