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L3_114_000G1_scaffold_87

Search features with annotation key words

Displaying items 1-30 of 151 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_000G1_scaffold_87_1
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3..272
DNA (270bp) protein (90aa)
p21 n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8LAP9_9GAMM
p21 {ECO:0000313|EMBL:EED39159.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
hypothetical protein
L3_114_000G1_scaffold_87_2
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

263..5287
DNA (5025bp) protein (1675aa)
Carbohydrate binding domain protein n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8KZZ9_9GAMM
Carbohydrate binding domain protein {ECO:0000313|EMBL:EED38702.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
hypothetical protein
L3_114_000G1_scaffold_87_3
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5289..5648
DNA (360bp) protein (120aa)
Putative uncharacterized protein n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L970_9GAMM
Putative uncharacterized protein {ECO:0000313|EMBL:EED40200.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
L3_114_000G1_scaffold_87_4
Stenotrophomonas phage S1, Caudovirales, Viruses

Not on your lists

comp(5713..6378)
DNA (666bp) protein (222aa)
Gp24 n=1 Tax=Stenotrophomonas phage S1 RepID=B7SYF4_9CAUD
Gp24 {ECO:0000313|EMBL:ACJ24749.1}; TaxID=573591 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Siphoviridae.;" source="Stenotrophomonas phage S1.;"
hypothetical protein
L3_114_000G1_scaffold_87_5
unknown

Not on your lists

comp(6451..7197)
DNA (747bp) protein (249aa)

This feature has no annotations

L3_114_000G1_scaffold_87_6
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7311..8315)
DNA (1005bp) protein (335aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia MF89 RepID=T5KMW7_STEMA
Uncharacterized protein {ECO:0000313|EMBL:EQM79168.1}; TaxID=1333853 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia MF89.;"
hypothetical protein
L3_114_000G1_scaffold_87_7
Stenotrophomonas phage S1, Caudovirales, Viruses

Not on your lists

8374..8979
DNA (606bp) protein (202aa)
Gp27 n=1 Tax=Stenotrophomonas phage S1 RepID=B7SYF7_9CAUD
Gp27 {ECO:0000313|EMBL:ACJ24752.1}; TaxID=573591 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Siphoviridae.;" source="Stenotrophomonas phage S1.;"
hypothetical protein
L3_114_000G1_scaffold_87_8
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9289..9669
DNA (381bp) protein (127aa)
Putative transcriptional regulator n=1 Tax=Stenotrophomonas maltophilia SKK35 RepID=M5D2E2_STEMA
Putative transcriptional regulator {ECO:0000313|EMBL:CCP12721.1}; TaxID=1118156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia SKK35.;"
response regulator receiver and unknown domain-containing protein
L3_114_000G1_scaffold_87_9
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9739..9936
DNA (198bp) protein (66aa)
Uncharacterized protein n=2 Tax=Stenotrophomonas RepID=M5CQ26_STEMA
Uncharacterized protein {ECO:0000313|EMBL:CCP12720.1}; TaxID=1118156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia SKK35.;"
L3_114_000G1_scaffold_87_10
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9982..10938)
DNA (957bp) protein (319aa)
Putative uncharacterized protein n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L575_9GAMM
Putative uncharacterized protein {ECO:0000313|EMBL:EED39782.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
hypothetical protein
L3_114_000G1_scaffold_87_11
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11016..11432
DNA (417bp) protein (139aa)
AttT protein n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L576_9GAMM
AttT protein {ECO:0000313|EMBL:EED40017.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
acetyltransferase (GNAT) family protein
L3_114_000G1_scaffold_87_12
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12430..12828)
DNA (399bp) protein (133aa)
Cu(I)-responsive transcriptional regulator n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L577_9GAMM
Cu(I)-responsive transcriptional regulator {ECO:0000313|EMBL:EED37807.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
zntR; MerR family Zn(II)-responsive regulator
L3_114_000G1_scaffold_87_13
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13014..14081
DNA (1068bp) protein (356aa)
AraC family transcriptional regulator n=1 Tax=Stenotrophomonas maltophilia SKK35 RepID=M5CQ23_STEMA
AraC family transcriptional regulator {ECO:0000313|EMBL:CCP12715.1}; TaxID=1118156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia SKK35.;"
AraC family transcriptional regulator
L3_114_000G1_scaffold_87_14
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14164..14967
DNA (804bp) protein (268aa)
Thiol:disulfide interchange protein dsbD {ECO:0000313|EMBL:CCP12714.1}; EC=1.8.1.8 {ECO:0000313|EMBL:CCP12714.1};; TaxID=1118156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia SKK35.;"
Thiol:disulfide interchange protein dsbD n=1 Tax=Stenotrophomonas maltophilia SKK35 RepID=M5CPU4_STEMA
redoxin domain-containing protein
L3_114_000G1_scaffold_87_15
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14998..15837
DNA (840bp) protein (280aa)
Thiol:disulfide interchange protein n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L580_9GAMM
Thiol:disulfide interchange protein {ECO:0000313|EMBL:EED40550.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
disulfide bond isomerase DsbC/G
L3_114_000G1_scaffold_87_16
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16353..17798
DNA (1446bp) protein (482aa)
Porin subfamily protein n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L581_9GAMM
Porin subfamily protein {ECO:0000313|EMBL:EED41062.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
hypothetical protein
L3_114_000G1_scaffold_87_17
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17875..19227
DNA (1353bp) protein (451aa)
Amino acid permease-associated region n=2 Tax=Stenotrophomonas RepID=B8L582_9GAMM
arginine:agmatin antiporter
Arginine/agmatine antiporter {ECO:0000313|EMBL:CCP12709.1}; TaxID=1118156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia SKK35.;"
L3_114_000G1_scaffold_87_18
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19248..21536
DNA (2289bp) protein (763aa)
Arginine decarboxylase {ECO:0000313|EMBL:CCP12708.1}; EC=4.1.1.19 {ECO:0000313|EMBL:CCP12708.1};; TaxID=1118156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia SKK35.;"
Arginine decarboxylase n=1 Tax=Stenotrophomonas maltophilia SKK35 RepID=M5CPT8_STEMA
orn/arg/lys decarboxylase
L3_114_000G1_scaffold_87_19
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21565..22467
DNA (903bp) protein (301aa)
Zinc transporter zitB n=1 Tax=Stenotrophomonas maltophilia SKK35 RepID=M5CQH9_STEMA
Zinc transporter zitB {ECO:0000313|EMBL:CCP12707.1}; TaxID=1118156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia SKK35.;"
cation efflux transmembrane protein
L3_114_000G1_scaffold_87_20
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22626..23339)
DNA (714bp) protein (238aa)
TonB family protein n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L585_9GAMM
TonB family protein {ECO:0000313|EMBL:EED38686.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
TonB family protein
L3_114_000G1_scaffold_87_21
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23332..24132)
DNA (801bp) protein (267aa)
Putative iron-regulated protein n=1 Tax=Stenotrophomonas maltophilia SKK35 RepID=M5D2C1_STEMA
Putative iron-regulated protein {ECO:0000313|EMBL:CCP12704.1}; TaxID=1118156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia SKK35.;"
iron regulated lipoprotein
L3_114_000G1_scaffold_87_22
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24119..26590)
DNA (2472bp) protein (824aa)
Putative TonB dependent receptor protein n=1 Tax=Stenotrophomonas maltophilia SKK35 RepID=M5CQ14_STEMA
Putative TonB dependent receptor protein {ECO:0000313|EMBL:CCP12703.1}; TaxID=1118156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia SKK35.;"
TonB dependent receptor protein
L3_114_000G1_scaffold_87_23
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26655..27581)
DNA (927bp) protein (309aa)
Sigma factor regulatory protein, FecR/PupR family n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L588_9GAMM
Sigma factor regulatory protein, FecR/PupR family {ECO:0000313|EMBL:EED40819.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
anti-FecI sigma factor FecR
L3_114_000G1_scaffold_87_24
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27578..28087)
DNA (510bp) protein (170aa)
RNA polymerase sigma factor sigZ n=1 Tax=Stenotrophomonas maltophilia SKK35 RepID=M5CQH3_STEMA
RNA polymerase sigma factor sigZ {ECO:0000313|EMBL:CCP12701.1}; TaxID=1118156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia SKK35.;"
ECF subfamily RNA polymerase sigma-24 subunit
L3_114_000G1_scaffold_87_25
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28236..28460)
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia SKK35 RepID=M5D2B5_STEMA
Uncharacterized protein {ECO:0000313|EMBL:CCP12699.1}; TaxID=1118156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia SKK35.;"
hypothetical protein
L3_114_000G1_scaffold_87_26
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28457..29158)
DNA (702bp) protein (234aa)
GMP synthase (Glutamine-hydrolysing) {ECO:0000313|EMBL:CCP12698.1}; EC=6.3.5.2 {ECO:0000313|EMBL:CCP12698.1};; TaxID=1118156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia SKK35.;"
GMP synthase (Glutamine-hydrolysing) n=1 Tax=Stenotrophomonas maltophilia SKK35 RepID=M5CQ12_STEMA
glutamine amidotransferase
L3_114_000G1_scaffold_87_27
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29155..29928)
DNA (774bp) protein (258aa)
UPF0001 protein n=1 Tax=Stenotrophomonas maltophilia SKK35 RepID=M5CPS9_STEMA
UPF0001 protein {ECO:0000313|EMBL:CCP12697.1}; TaxID=1118156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia SKK35.;"
hypothetical protein
L3_114_000G1_scaffold_87_28
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30005..31291
DNA (1287bp) protein (429aa)
GntR-family transcriptional regulator n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L593_9GAMM
GntR-family transcriptional regulator {ECO:0000313|EMBL:EED39481.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
GntR family transcriptional regulator
L3_114_000G1_scaffold_87_29
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31412..31918)
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia SKK35 RepID=M5D2A9_STEMA
Uncharacterized protein {ECO:0000313|EMBL:CCP12694.1}; TaxID=1118156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia SKK35.;"
hypothetical protein
L3_114_000G1_scaffold_87_30
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32123..35233)
DNA (3111bp) protein (1037aa)
Error-prone DNA polymerase {ECO:0000256|HAMAP-Rule:MF_01902}; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01902};; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
dnaE2; DNA polymerase III subunit alpha (EC:2.7.7.7)
DNA polymerase n=1 Tax=Pseudomonas geniculata RepID=UPI00029AA46E
Displaying items 1-30 of 151 in total

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