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L3_114_000G1_scaffold_102

Search features with annotation key words

Displaying items 1-30 of 131 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_000G1_scaffold_102_1
unknown

Not on your lists

comp(59..208)
DNA (150bp) protein (50aa)

This feature has no annotations

L3_114_000G1_scaffold_102_2
Lachnospiraceae bacterium 3-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(208..675)
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-1 RepID=R9J0J2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS27623.1}; TaxID=397288 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-1.;"
hypothetical protein
L3_114_000G1_scaffold_102_3
Bacillus sp. SJS, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(623..853)
DNA (231bp) protein (77aa)
Putative head-tail adaptor n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6N2M5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KEZ58236.1}; TaxID=1423321 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sp. SJS.;"
L3_114_000G1_scaffold_102_4
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(990..2108)
DNA (1119bp) protein (373aa)
Transcriptional regulator, XRE family n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KM47_CLOPH
XRE family transcriptional regulator
Transcriptional regulator, XRE family {ECO:0000313|EMBL:ABX41390.1}; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
L3_114_000G1_scaffold_102_5
Bacillus sp. B-jedd, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(2250..2543)
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Bacillus azotoformans LMG 9581 RepID=K6DIZ7_BACAZ
Uncharacterized protein {ECO:0000313|EMBL:CEG26007.1}; TaxID=1476857 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sp. B-jedd.;"
hypothetical protein
L3_114_000G1_scaffold_102_6
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2543..3766)
DNA (1224bp) protein (408aa)
Phage major capsid protein, HK97 family n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5US61_CLOBO
Uncharacterized protein {ECO:0000313|EMBL:KHD16021.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
phage major capsid protein, HK97 family
L3_114_000G1_scaffold_102_7
Bacillus azotoformans, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3837..4424)
DNA (588bp) protein (196aa)
Phage prohead protease n=1 Tax=Bacillus azotoformans LMG 9581 RepID=K6E4C1_BACAZ
peptidase U35
Phage prohead protease {ECO:0000313|EMBL:EKN68066.1}; TaxID=1131731 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus azotoformans LMG 9581.;"
L3_114_000G1_scaffold_102_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4454..5746)
DNA (1293bp) protein (431aa)
Phage portal protein, HK97 family n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RJ31_CLOPF
Phage portal protein, HK97 family {ECO:0000313|EMBL:EDT26057.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
portal protein
L3_114_000G1_scaffold_102_9
Bacillus cereus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5758..7440)
DNA (1683bp) protein (561aa)
Phage terminase, large subunit n=2 Tax=Bacillus cereus RepID=C2Z2U7_BACCE
Phage terminase, large subunit {ECO:0000313|EMBL:EEL89659.1}; TaxID=526993 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus cereus AH1272.;"
terminase large subunit
L3_114_000G1_scaffold_102_10
Bacillus sp. B-jedd, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7437..7907)
DNA (471bp) protein (157aa)
Phage-related protein n=1 Tax=Clostridium tetani (strain Massachusetts / E88) RepID=Q892G6_CLOTE
Phage terminase P27 {ECO:0000313|EMBL:CEG26001.1}; TaxID=1476857 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sp. B-jedd.;"
terminase
L3_114_000G1_scaffold_102_11
unknown

Not on your lists

comp(7995..9500)
DNA (1506bp) protein (502aa)

This feature has no annotations

L3_114_000G1_scaffold_102_12
Exiguobacterium sp. RIT341, Exiguobacterium, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(9744..10364)
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Aneurinibacillus aneurinilyticus ATCC 12856 RepID=U1WXK0_ANEAE
Uncharacterized protein {ECO:0000313|EMBL:EZP62087.1}; TaxID=1470592 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillales Family XII. Incertae Sedis; Exiguobacterium.;" source="Exiguobacterium sp. RIT341.;"
hypothetical protein
L3_114_000G1_scaffold_102_13
[Clostridium] papyrosolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10723..11133)
DNA (411bp) protein (137aa)
Putative uncharacterized protein n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=F1TFZ6_9CLOT
Putative uncharacterized protein {ECO:0000313|EMBL:EGD46615.1}; TaxID=588581 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] papyrosolvens DSM 2782.;"
L3_114_000G1_scaffold_102_14
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11378..11917)
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K354_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN33424.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
hypothetical protein
L3_114_000G1_scaffold_102_15
unknown

Not on your lists

comp(11990..12148)
DNA (159bp) protein (53aa)
hypothetical protein
L3_114_000G1_scaffold_102_16
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12298..12624)
DNA (327bp) protein (109aa)
MazG nucleotide pyrophosphohydrolase domain protein n=2 Tax=Lachnospiraceae RepID=A7B5K7_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN48922.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L3_114_000G1_scaffold_102_17
Ruminococcus flavefaciens, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12763..13176)
DNA (414bp) protein (138aa)
histidine triad protein n=1 Tax=Butyrivibrio sp. AE3009 RepID=UPI0003B70CBB
Uncharacterized protein {ECO:0000313|EMBL:EWM54496.1}; TaxID=1341157 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus flavefaciens 007c.;"
HIT family hydrolase
L3_114_000G1_scaffold_102_18
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13202..13540)
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JMG4_CELLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADZ83482.1}; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
L3_114_000G1_scaffold_102_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13778..14221)
DNA (444bp) protein (148aa)
Possible sigma factor n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RIS0_CLOPF
Possible sigma factor {ECO:0000313|EMBL:EDT26133.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
putative sigma factor
L3_114_000G1_scaffold_102_20
unknown

Not on your lists

comp(14245..14574)
DNA (330bp) protein (110aa)

This feature has no annotations

L3_114_000G1_scaffold_102_21
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14574..14942)
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JSZ2_CELLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADZ84113.1}; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
L3_114_000G1_scaffold_102_22
unknown

Not on your lists

comp(14970..15260)
DNA (291bp) protein (97aa)

This feature has no annotations

L3_114_000G1_scaffold_102_23
Blautia hydrogenotrophica CAG:147, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15568..16914)
DNA (1347bp) protein (449aa)
Toprim domain / phage/plasmid primase P4 family C-terminal domain multi-domain protein n=1 Tax=Blautia hydrogenotrophica CAG:147 RepID=R5BWZ0_9FIRM
Toprim domain / phage/plasmid primase P4 family C-terminal domain multi-domain protein {ECO:0000313|EMBL:CCX60150.1}; TaxID=1263061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia hydrogenotrophica CAG:147.;"
primase
L3_114_000G1_scaffold_102_24
Listeriaceae bacterium FSL A5-0209, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(16929..17774)
DNA (846bp) protein (282aa)
DNA primase n=1 Tax=Listeria monocytogenes RepID=S5KDM1_LISMN
DNA primase {ECO:0000313|EMBL:KGL46228.1}; TaxID=1497679 species="Bacteria; Firmicutes; Bacilli; Bacillales; Listeriaceae.;" source="Listeriaceae bacterium FSL A5-0209.;"
primase
L3_114_000G1_scaffold_102_25
Blautia hydrogenotrophica CAG:147, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17833..18396)
DNA (564bp) protein (188aa)
Uncharacterized protein n=2 Tax=Blautia RepID=R5BTD6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX58773.1}; TaxID=1263061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia hydrogenotrophica CAG:147.;"
L3_114_000G1_scaffold_102_26
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18398..18922)
DNA (525bp) protein (175aa)
ERCC4 domain protein n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JQT0_CELLD
ERCC4 domain-containing protein
ERCC4 domain protein {ECO:0000313|EMBL:ADZ82675.1}; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
L3_114_000G1_scaffold_102_27
Erysipelotrichaceae bacterium 2_2_44A, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(18924..19562)
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Erysipelotrichaceae bacterium 2_2_44A RepID=G1VS43_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX73775.1}; TaxID=457422 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 2_2_44A.;"
hypothetical protein
L3_114_000G1_scaffold_102_28
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19578..20105)
DNA (528bp) protein (176aa)
Bacteriophage Mu Gam like protein n=1 Tax=Clostridium botulinum CFSAN002367 RepID=S8CKN7_CLOBO
Uncharacterized protein {ECO:0000313|EMBL:KIN81881.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
L3_114_000G1_scaffold_102_29
unknown

Not on your lists

comp(20095..20298)
DNA (204bp) protein (68aa)

This feature has no annotations

L3_114_000G1_scaffold_102_30
Geobacillus sp. G1w1, Geobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(20303..20503)
DNA (201bp) protein (67aa)
XRE family plasmid maintenance system antidote protein n=3 Tax=root RepID=E8STV5_GEOS2
DNA-binding protein {ECO:0000313|EMBL:KFX35875.1}; TaxID=1430331 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Geobacillus.;" source="Geobacillus sp. G1w1.;"
XRE family transcriptional regulator
Displaying items 1-30 of 131 in total

View Taxonomy