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L3_114_000G1_scaffold_138

Search features with annotation key words

Displaying items 1-30 of 116 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_000G1_scaffold_138_1
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1009..1572
DNA (564bp) protein (188aa)
Pts system N-acetylglucosamine-specific eiicba component {ECO:0000313|EMBL:EEP52605.1}; EC=2.7.1.- {ECO:0000313|EMBL:EEP52605.1};; EC=2.7.1.69 {ECO:0000313|EMBL:EEP52605.1};; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
ptsG: PTS system glucose-specific EIIBCA component (EC:2.7.1.69 2.7.1.-)
Pts system N-acetylglucosamine-specific eiicba component n=4 Tax=Clostridium butyricum RepID=B1QY86_CLOBU
L3_114_000G1_scaffold_138_2
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1749..3434)
DNA (1686bp) protein (562aa)
PTS system, glucose-like IIB component (EC:2.7.1.69)
PTS system, glucose-like IIB component n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YQ18_CLOBU
PTS system, glucose-like IIB component {ECO:0000313|EMBL:ENZ29555.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
L3_114_000G1_scaffold_138_3
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3694..4548)
DNA (855bp) protein (285aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0A9X2_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ29554.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
transcription antiterminator LicT
L3_114_000G1_scaffold_138_4
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4586..5536)
DNA (951bp) protein (317aa)
yjcK; putative ribosomal-protein-alanine acetyltransferase YjcK (EC:2.3.1.128)
Acetyltransferase, GNAT family n=2 Tax=Clostridium butyricum RepID=M8JC08_CLOBU
Ribosomal-protein-S5p-alanine acetyltransferase {ECO:0000313|EMBL:KJZ88875.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
L3_114_000G1_scaffold_138_5
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5760..6494)
DNA (735bp) protein (245aa)
Dinucleotide-utilizing enzyme involved in molybdopterin and thiamine biosynthesis family 1 n=4 Tax=Clostridium butyricum RepID=B1QY82_CLOBU
CsdL protein of the HesA/MoeB/ThiF family, part of the CsdA-E-L sulfur transfer pathway {ECO:0000313|EMBL:KJZ88880.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
yrvM; protein YrvM
L3_114_000G1_scaffold_138_6
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6947..7639
DNA (693bp) protein (231aa)
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 1 {ECO:0000256|SAAS:SAAS00035231}; EC=3.2.2.9 {ECO:0000256|SAAS:SAAS00035196};; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase {ECO:0000256|SAAS:SAAS00035261}; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 2 {ECO:0000256|SAAS:SAAS00035188}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
mtnN; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase MtnN (EC:3.2.2.9)
MTA/SAH nucleosidase n=2 Tax=Clostridium butyricum RepID=M8K6Q3_CLOBU
L3_114_000G1_scaffold_138_7
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7772..8047)
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YQ15_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ91891.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
L3_114_000G1_scaffold_138_8
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8119..9102)
DNA (984bp) protein (328aa)
Thymidylate synthase {ECO:0000313|EMBL:KJZ86192.1}; EC=2.1.1.45 {ECO:0000313|EMBL:KJZ86192.1};; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
Oligopeptide/dipeptide ABC transporter, ATP-binding protein n=2 Tax=Clostridium butyricum RepID=M8JDA2_CLOBU
appF1; Oligopeptide transport ATP-binding protein AppF
L3_114_000G1_scaffold_138_9
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9102..10097)
DNA (996bp) protein (332aa)
Oligopeptide/dipeptide ABC transporter, ATP-binding protein domain n=1 Tax=Clostridium butyricum 60E.3 RepID=N9ZZ52_CLOBU
Oligopeptide transport system permease protein OppB {ECO:0000313|EMBL:KJZ88865.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
appD; Oligopeptide transport ATP-binding protein AppD
L3_114_000G1_scaffold_138_10
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10109..11005)
DNA (897bp) protein (299aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ABL9_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ29547.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
binding-protein-dependent transport systems inner membrane component
L3_114_000G1_scaffold_138_11
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11019..11981)
DNA (963bp) protein (321aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YPH8_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ29546.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
appB; Oligopeptide transport system permease protein AppB
L3_114_000G1_scaffold_138_12
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12060..13817)
DNA (1758bp) protein (586aa)
5'-methylthioadenosine nucleosidase/S-adenosylhomocysteine nucleosidase {ECO:0000313|EMBL:KJZ86188.1}; EC=3.2.2.16 {ECO:0000313|EMBL:KJZ86188.1};; EC=3.2.2.9 {ECO:0000313|EMBL:KJZ86188.1};; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YQ10_CLOBU
extracellular solute-binding protein
L3_114_000G1_scaffold_138_13
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13781..13960)
DNA (180bp) protein (60aa)
Uncharacterized protein {ECO:0000313|EMBL:KJZ86227.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
L3_114_000G1_scaffold_138_14
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14263..15558)
DNA (1296bp) protein (432aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JD97_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ88883.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
L3_114_000G1_scaffold_138_15
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15750..16658)
DNA (909bp) protein (303aa)
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase {ECO:0000313|EMBL:KJZ86208.1}; EC=2.6.1.62 {ECO:0000313|EMBL:KJZ86208.1};; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
serA; D-3-phosphoglycerate dehydrogenase SerA (EC:1.1.1.95)
D-isomer specific 2-hydroxyacid dehydrogenase family protein n=2 Tax=Clostridium butyricum RepID=M8JBZ8_CLOBU
L3_114_000G1_scaffold_138_16
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17153..18235)
DNA (1083bp) protein (361aa)
Phosphoserine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160}; EC=2.6.1.52 {ECO:0000256|HAMAP-Rule:MF_00160};; Phosphohydroxythreonine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
Phosphoserine aminotransferase n=2 Tax=Clostridium butyricum RepID=M8JYN1_CLOBU
MFS transporter
L3_114_000G1_scaffold_138_17
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18445..18633)
DNA (189bp) protein (63aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1QY77_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ91890.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
hypothetical protein
L3_114_000G1_scaffold_138_18
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18708..20102)
DNA (1395bp) protein (465aa)
Surface protective antigen SpaB n=3 Tax=Clostridium butyricum RepID=B1QY76_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ29540.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
SH3 type 3 domain-containing protein
L3_114_000G1_scaffold_138_19
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20400..20669)
DNA (270bp) protein (90aa)
Sigma-K factor processing regulatory protein BofA n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JD93_CLOBU
Inhibitor of pro-sigmaK processing BofA {ECO:0000313|EMBL:KJZ88916.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
bofA; sigma-K factor processing regulatory protein BofA
L3_114_000G1_scaffold_138_20
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20693..20971)
DNA (279bp) protein (93aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1QY74_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:EEP52376.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
hypothetical protein
L3_114_000G1_scaffold_138_21
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21196..21792)
DNA (597bp) protein (199aa)
Recombination protein RecR n=4 Tax=Clostridium butyricum RepID=B1QY73_CLOBU
Recombination protein RecR {ECO:0000256|HAMAP-Rule:MF_00017, ECO:0000256|SAAS:SAAS00012243}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
recR; recombination protein RecR
L3_114_000G1_scaffold_138_22
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21972..22310)
DNA (339bp) protein (113aa)
Nucleoid-associated protein CBDKU1_40060 n=2 Tax=Clostridium butyricum RepID=M8K6N7_CLOBU
Nucleoid-associated protein ClosIBUN13A_CONTIG65g00717 {ECO:0000256|HAMAP-Rule:MF_00274}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
DNA-binding protein, YbaB/EbfC family
L3_114_000G1_scaffold_138_23
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22435..24102)
DNA (1668bp) protein (556aa)
dnaX; DNA polymerase III subunit gamma/tau (EC:2.7.7.7)
DNA polymerase III subunit gamma/tau n=2 Tax=Clostridium butyricum RepID=M8J2Y9_CLOBU
DNA polymerase III subunit gamma/tau {ECO:0000313|EMBL:ETI91949.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
L3_114_000G1_scaffold_138_24
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24388..24792
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0A9V2_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ88935.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
Glyoxalase/bleomycin resistance protein/dioxygenase
L3_114_000G1_scaffold_138_25
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24904..25695
DNA (792bp) protein (264aa)
Thymidylate synthase {ECO:0000256|HAMAP-Rule:MF_00008, ECO:0000256|SAAS:SAAS00215270}; Short=TS {ECO:0000256|HAMAP-Rule:MF_00008};; Short=TSase {ECO:0000256|HAMAP-Rule:MF_00008};; EC=2.1.1.45 {ECO:0000256|HAMAP-Rule:MF_00008};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
thyA; thymidylate synthase ThyA (EC:2.1.1.45)
Thymidylate synthase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JBZ0_CLOBU
L3_114_000G1_scaffold_138_26
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25805..26296
DNA (492bp) protein (164aa)
Dihydrofolate reductase {ECO:0000256|PIRNR:PIRNR000194}; EC=1.5.1.3 {ECO:0000256|PIRNR:PIRNR000194};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
folA; dihydrofolate reductase FolA (EC:1.5.1.3)
Dihydrofolate reductase n=2 Tax=Clostridium butyricum RepID=M8JYM0_CLOBU
L3_114_000G1_scaffold_138_27
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26405..27292
DNA (888bp) protein (296aa)
ureidoglycolate lyase (EC:4.3.2.3)
5-carboxymethyl-2-hydroxymuconate Delta-isomerase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K6N0_CLOBU
Fumarylacetoacetase {ECO:0000313|EMBL:KHD14899.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
L3_114_000G1_scaffold_138_28
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28121..28918)
DNA (798bp) protein (266aa)
Glutamine ABC transporter, permease/substrate-binding protein n=2 Tax=Clostridium butyricum RepID=M8J2Y1_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ29530.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
glnH1; glutamine-binding periplasmic protein GlnH
L3_114_000G1_scaffold_138_29
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29210..29941)
DNA (732bp) protein (244aa)
Glutamine transport ATP-binding protein GlnQ n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JD82_CLOBU
Peptide ABC transporter ATP-binding protein {ECO:0000313|EMBL:KHD14901.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
glnQ1; glutamine transport ATP-binding protein GlnQ
L3_114_000G1_scaffold_138_30
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29922..30587)
DNA (666bp) protein (222aa)
Glutamine ABC transporter, permease/substrate-binding protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JBY6_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ88924.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
glnP1; glutamine transport system permease protein GlnP
Displaying items 1-30 of 116 in total

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