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L3_114_000G1_scaffold_166

Search features with annotation key words

Displaying items 1-30 of 192 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_000G1_scaffold_166_1
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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199..387
DNA (189bp) protein (63aa)
Uncharacterized protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZGQ9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ07654.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
L3_114_000G1_scaffold_166_2
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

644..1744
DNA (1101bp) protein (367aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H7I3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU96126.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
hypothetical protein
L3_114_000G1_scaffold_166_3
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1769..2914
DNA (1146bp) protein (382aa)
Site-specific recombinases, DNA invertase Pin homologs n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4KBG3_9FIRM
Site-specific recombinases, DNA invertase Pin homologs
Site-specific recombinases, DNA invertase Pin homologs {ECO:0000313|EMBL:CBL02176.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L3_114_000G1_scaffold_166_4
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3491..4003
DNA (513bp) protein (171aa)
Nitroreductase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JZ82_9FIRM
Nitroreductase
Nitroreductase {ECO:0000313|EMBL:CBK99331.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_114_000G1_scaffold_166_5
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4023..5123
DNA (1101bp) protein (367aa)
Sugar transferases involved in lipopolysaccharide synthesis n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JZ85_9FIRM
Sugar transferases involved in lipopolysaccharide synthesis
Sugar transferases involved in lipopolysaccharide synthesis {ECO:0000313|EMBL:CBK99334.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_114_000G1_scaffold_166_6
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5146..6078
DNA (933bp) protein (311aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JZ86_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK99335.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_114_000G1_scaffold_166_7
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6082..7074
DNA (993bp) protein (331aa)
Glycosyltransferases involved in cell wall biogenesis n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JZ87_9FIRM
Glycosyltransferases involved in cell wall biogenesis
Glycosyltransferases involved in cell wall biogenesis {ECO:0000313|EMBL:CBK99336.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_114_000G1_scaffold_166_8
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


7171..8505
DNA (1335bp) protein (445aa)
Aspartyl/asparaginyl-tRNA synthetases (EC:6.1.1.12)
Aspartyl/asparaginyl-tRNA synthetases {ECO:0000313|EMBL:CBK99337.1}; EC=6.1.1.12 {ECO:0000313|EMBL:CBK99337.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Aspartyl/asparaginyl-tRNA synthetases n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JZ88_9FIRM
L3_114_000G1_scaffold_166_9
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8813..11389)
DNA (2577bp) protein (859aa)
Copper-(Or silver)-translocating P-type ATPase {ECO:0000313|EMBL:CBK99338.1}; EC=3.6.3.4 {ECO:0000313|EMBL:CBK99338.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
copper-(or silver)-translocating P-type ATPase (EC:3.6.3.4)
Copper-(Or silver)-translocating P-type ATPase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JZ89_9FIRM
L3_114_000G1_scaffold_166_10
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11430..11780)
DNA (351bp) protein (117aa)
Uncharacterized protein conserved in bacteria n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JZ90_9FIRM
hypothetical protein
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:CBK99339.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_114_000G1_scaffold_166_11
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12022..13500)
DNA (1479bp) protein (493aa)
glutamate synthase (NADH) small subunit (EC:1.4.1.14 1.4.1.13)
Glutamate synthase (NADH) small subunit {ECO:0000313|EMBL:CBK99340.1}; EC=1.4.1.13 {ECO:0000313|EMBL:CBK99340.1};; EC=1.4.1.14 {ECO:0000313|EMBL:CBK99340.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Glutamate synthase (NADH) small subunit n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JZ91_9FIRM
L3_114_000G1_scaffold_166_12
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13514..18049)
DNA (4536bp) protein (1512aa)
Glutamate synthase domain 2 {ECO:0000313|EMBL:CBK99341.1}; EC=1.4.1.13 {ECO:0000313|EMBL:CBK99341.1};; EC=1.4.1.14 {ECO:0000313|EMBL:CBK99341.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Glutamate synthase domain 2 (EC:1.4.1.13 1.4.1.14)
Glutamate synthase domain 2 n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JZ92_9FIRM
L3_114_000G1_scaffold_166_13
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18324..19925)
DNA (1602bp) protein (534aa)
Hydroxylamine reductase {ECO:0000256|HAMAP-Rule:MF_00069, ECO:0000256|SAAS:SAAS00038686}; EC=1.7.99.1 {ECO:0000256|HAMAP-Rule:MF_00069, ECO:0000256|SAAS:SAAS00150119};; Hybrid-cluster protein {ECO:0000256|HAMAP-Rule:MF_00069}; Prismane protein {ECO:0000256|HAMAP-Rule:MF_00069}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
hydroxylamine reductase (EC:1.7.-.-)
Hydroxylamine reductase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JZ93_9FIRM
L3_114_000G1_scaffold_166_14
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20051..21403)
DNA (1353bp) protein (451aa)
glutamate dehydrogenase (NADP) (EC:1.4.1.4)
Glutamate dehydrogenase n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZI44_9FIRM
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
L3_114_000G1_scaffold_166_15
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21697..22527)
DNA (831bp) protein (277aa)
ATPases involved in chromosome partitioning n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4KBX5_9FIRM
ATPases involved in chromosome partitioning
ATPases involved in chromosome partitioning {ECO:0000313|EMBL:CBL02338.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L3_114_000G1_scaffold_166_16
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22729..24309
DNA (1581bp) protein (527aa)
Membrane protein involved in the export of O-antigen and teichoic acid n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JZ95_9FIRM
Membrane protein involved in the export of O-antigen and teichoic acid
Membrane protein involved in the export of O-antigen and teichoic acid {ECO:0000313|EMBL:CBK99344.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_114_000G1_scaffold_166_17
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24432..26330
DNA (1899bp) protein (633aa)
Polysaccharide biosynthesis protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZI49_9FIRM
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:EFQ07166.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
polysaccharide biosynthesis protein CapD
L3_114_000G1_scaffold_166_18
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26389..27687
DNA (1299bp) protein (433aa)
Diaminopimelate decarboxylase (EC:4.1.1.20)
Diaminopimelate decarboxylase {ECO:0000313|EMBL:CBK99345.1}; EC=4.1.1.20 {ECO:0000313|EMBL:CBK99345.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Diaminopimelate decarboxylase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JZ96_9FIRM
L3_114_000G1_scaffold_166_19
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27736..28131
DNA (396bp) protein (132aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JZ97_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK99346.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_114_000G1_scaffold_166_20
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28322..29098)
DNA (777bp) protein (259aa)
HAD-superfamily hydrolase, subfamily IIB n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JZ98_9FIRM
HAD-superfamily hydrolase, subfamily IIB
HAD-superfamily hydrolase, subfamily IIB {ECO:0000313|EMBL:CBK99347.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_114_000G1_scaffold_166_21
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(29177..29797)
DNA (621bp) protein (207aa)
Chloramphenicol O-acetyltransferase {ECO:0000313|EMBL:EEA81513.1}; EC=2.3.1.28 {ECO:0000313|EMBL:EEA81513.1};; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
cat; chloramphenicol acetyltransferase (EC:2.3.1.28)
Chloramphenicol O-acetyltransferase n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FR05_9CLOT
L3_114_000G1_scaffold_166_22
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29799..30803)
DNA (1005bp) protein (335aa)
Pseudouridylate synthases, 23S RNA-specific (EC:5.4.99.12)
Pseudouridylate synthases, 23S RNA-specific {ECO:0000313|EMBL:CBK99348.1}; EC=5.4.99.12 {ECO:0000313|EMBL:CBK99348.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Pseudouridylate synthases, 23S RNA-specific n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JZ99_9FIRM
L3_114_000G1_scaffold_166_23
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30954..31688
DNA (735bp) protein (245aa)
DNA repair protein radc n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JZA0_9FIRM
DNA repair protein radc
DNA repair protein radc {ECO:0000313|EMBL:CBK99349.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_114_000G1_scaffold_166_24
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31766..33823
DNA (2058bp) protein (686aa)
UvrABC system protein B n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6R539_9FIRM
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_00204}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
Excinuclease ABC subunit B
L3_114_000G1_scaffold_166_25
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33810..36668
DNA (2859bp) protein (953aa)
UvrABC system protein A n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZI55_9FIRM
UvrABC system protein A {ECO:0000256|HAMAP-Rule:MF_00205, ECO:0000256|SAAS:SAAS00088996}; Short=UvrA protein {ECO:0000256|HAMAP-Rule:MF_00205};; Excinuclease ABC subunit A {ECO:0000256|HAMAP-Rule:MF_00205}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
uvrA; UvrABC system protein A
L3_114_000G1_scaffold_166_26
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37068..38564
DNA (1497bp) protein (499aa)
Stage IV sporulation protein A {ECO:0000256|PIRNR:PIRNR007466}; EC=3.6.1.3 {ECO:0000256|PIRNR:PIRNR007466};; Coat morphogenetic protein SpoIVA {ECO:0000256|PIRNR:PIRNR007466}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
Stage IV sporulation protein A n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6Q8V7_9FIRM
stage IV sporulation protein A
L3_114_000G1_scaffold_166_27
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(38609..39160)
DNA (552bp) protein (184aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K4H6_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK98419.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_114_000G1_scaffold_166_28
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(39212..40144)
DNA (933bp) protein (311aa)
Ribosomal protein S1 n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K4H5_9FIRM
Ribosomal protein S1
Ribosomal protein S1 {ECO:0000313|EMBL:CBK98418.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_114_000G1_scaffold_166_29
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

40308..40496
DNA (189bp) protein (63aa)
Uncharacterized protein conserved in bacteria n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K4H4_9FIRM
hypothetical protein
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:CBK98417.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_114_000G1_scaffold_166_30
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

40548..41633
DNA (1086bp) protein (362aa)
Peptide chain release factor 1 n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K4H3_9FIRM
bacterial peptide chain release factor 1 (bRF-1)
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Displaying items 1-30 of 192 in total

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