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L3_114_000G1_scaffold_178

Search features with annotation key words

Displaying items 1-30 of 198 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_000G1_scaffold_178_1
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(613..873)
DNA (261bp) protein (87aa)
30S ribosomal protein S20 n=4 Tax=Faecalibacterium RepID=D4JXJ9_9FIRM
SSU ribosomal protein S20P
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
L3_114_000G1_scaffold_178_2
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1052..1831
DNA (780bp) protein (260aa)
Germination protease. (EC:3.4.24.78)
Germination protease {ECO:0000313|EMBL:CBK98747.1}; EC=3.4.24.78 {ECO:0000313|EMBL:CBK98747.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Germination protease n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JXJ8_9FIRM
L3_114_000G1_scaffold_178_3
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1887..3014
DNA (1128bp) protein (376aa)
Stage II sporulation protein P n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JXJ7_9FIRM
stage II sporulation protein P
Stage II sporulation protein P {ECO:0000313|EMBL:CBK98746.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_114_000G1_scaffold_178_4
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3366..4754
DNA (1389bp) protein (463aa)
asparaginyl-tRNA synthetase (EC:6.1.1.22)
Asparagine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453}; EC=6.1.1.22 {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453};; Asparaginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00534}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Asparagine--tRNA ligase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JXJ6_9FIRM
L3_114_000G1_scaffold_178_5
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4934..5977
DNA (1044bp) protein (348aa)
A/G-specific adenine glycosylase (EC:3.2.2.-)
Putative A/G-specific adenine glycosylase n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZK16_9FIRM
Putative A/G-specific adenine glycosylase {ECO:0000313|EMBL:EFQ06499.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
L3_114_000G1_scaffold_178_6
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6121..6342
DNA (222bp) protein (74aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JXJ5_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK98744.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_114_000G1_scaffold_178_7
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6464..7768
DNA (1305bp) protein (435aa)
Membrane-bound metallopeptidase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JXJ4_9FIRM
Membrane-bound metallopeptidase
Membrane-bound metallopeptidase {ECO:0000313|EMBL:CBK98743.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_114_000G1_scaffold_178_8
Lachnospiraceae bacterium 3-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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7761..8621
DNA (861bp) protein (287aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-1 RepID=R9IEY9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS20499.1}; TaxID=397288 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-1.;"
NapH; polyferredoxin
L3_114_000G1_scaffold_178_9
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8717..9700)
DNA (984bp) protein (328aa)
Predicted oxidoreductases (Related to aryl-alcohol dehydrogenases) n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JXJ1_9FIRM
Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
Predicted oxidoreductases (Related to aryl-alcohol dehydrogenases) {ECO:0000313|EMBL:CBK98740.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_114_000G1_scaffold_178_10
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9841..11445)
DNA (1605bp) protein (535aa)
Peptide chain release factor 3 n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JXJ0_9FIRM
bacterial peptide chain release factor 3 (bRF-3)
Peptide chain release factor 3 {ECO:0000256|HAMAP-Rule:MF_00072, ECO:0000256|SAAS:SAAS00089051}; Short=RF-3 {ECO:0000256|HAMAP-Rule:MF_00072};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_114_000G1_scaffold_178_11
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11596..12453)
DNA (858bp) protein (286aa)
Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JXI9_9FIRM
Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis
Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis {ECO:0000313|EMBL:CBK98738.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_114_000G1_scaffold_178_12
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12761..14176
DNA (1416bp) protein (472aa)
Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain (EC:1.3.1.74)
Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain {ECO:0000313|EMBL:CBK98736.1}; EC=1.3.1.74 {ECO:0000313|EMBL:CBK98736.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JXI7_9FIRM
L3_114_000G1_scaffold_178_13
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14228..16177)
DNA (1950bp) protein (650aa)
Pullulanase, type I n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JXI6_9FIRM
pullulanase, type I
Pullulanase, type I {ECO:0000313|EMBL:CBK98735.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_114_000G1_scaffold_178_14
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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16312..18330
DNA (2019bp) protein (673aa)
ATPases of the AAA+ class n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JXI5_9FIRM
ATPases of the AAA+ class
ATPases of the AAA+ class {ECO:0000313|EMBL:CBK98734.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_114_000G1_scaffold_178_15
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(18371..19168)
DNA (798bp) protein (266aa)
Transcriptional regulators n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JXI4_9FIRM
Transcriptional regulators
Transcriptional regulators {ECO:0000313|EMBL:CBK98733.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_114_000G1_scaffold_178_16
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19420..20829)
DNA (1410bp) protein (470aa)
Uncharacterized FAD-dependent dehydrogenases n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JXI3_9FIRM
Uncharacterized FAD-dependent dehydrogenases
Uncharacterized FAD-dependent dehydrogenases {ECO:0000313|EMBL:CBK98732.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_114_000G1_scaffold_178_17
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20908..21609)
DNA (702bp) protein (234aa)
Uncharacterized conserved protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JXI2_9FIRM
hypothetical protein
Uncharacterized conserved protein {ECO:0000313|EMBL:CBK98731.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_114_000G1_scaffold_178_18
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21631..23034)
DNA (1404bp) protein (468aa)
MATE efflux family protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZJY8_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EFQ06530.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
hypothetical protein
L3_114_000G1_scaffold_178_19
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23164..23772)
DNA (609bp) protein (203aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JXI1_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK98730.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_114_000G1_scaffold_178_20
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23798..25141)
DNA (1344bp) protein (448aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JXI0_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK98729.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_114_000G1_scaffold_178_21
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25175..26005)
DNA (831bp) protein (277aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JXH9_9FIRM
Protein of unknown function, DUF624.
Uncharacterized protein {ECO:0000313|EMBL:CBK98728.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_114_000G1_scaffold_178_22
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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26236..26961
DNA (726bp) protein (242aa)
1-acyl-sn-glycerol-3-phosphate acyltransferase {ECO:0000256|RuleBase:RU361267}; EC=2.3.1.51 {ECO:0000256|RuleBase:RU361267};; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
1-acyl-sn-glycerol-3-phosphate acyltransferases (EC:2.3.1.51)
Acyltransferase n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6PZ02_9FIRM
L3_114_000G1_scaffold_178_23
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26984..27748
DNA (765bp) protein (255aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JXH8_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK98727.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_114_000G1_scaffold_178_24
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27752..27907
DNA (156bp) protein (52aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JXH7_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK98726.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_114_000G1_scaffold_178_25
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(27950..28867)
DNA (918bp) protein (306aa)
LysR substrate binding domain protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CT29_9CLOT
LysR substrate binding domain protein {ECO:0000313|EMBL:EEG57763.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
transcriptional regulator, LysR family
L3_114_000G1_scaffold_178_26
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(29001..30308)
DNA (1308bp) protein (436aa)
Citrate transporter n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CT30_9CLOT
Citrate transporter {ECO:0000313|EMBL:EEG57764.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
CitMHS family citrate/H+ symporter
L3_114_000G1_scaffold_178_27
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(30339..31190)
DNA (852bp) protein (284aa)
Arylesterase n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CT31_9CLOT
Arylesterase {ECO:0000313|EMBL:EEG57765.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
alpha/beta hydrolase fold protein
L3_114_000G1_scaffold_178_28
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31494..32564
DNA (1071bp) protein (357aa)
monofunctional chorismate mutase, gram positive-type, clade 2 (EC:4.2.1.51)
Monofunctional chorismate mutase, gram positive-type, clade 2 {ECO:0000313|EMBL:CBK98725.1}; EC=4.2.1.51 {ECO:0000313|EMBL:CBK98725.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Monofunctional chorismate mutase, gram positive-type, clade 2 n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JXH6_9FIRM
L3_114_000G1_scaffold_178_29
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32561..33604
DNA (1044bp) protein (348aa)
3-dehydroquinate synthase (EC:4.2.3.4)
3-dehydroquinate synthase {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210858}; EC=4.2.3.4 {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210855};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
3-dehydroquinate synthase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JXH5_9FIRM
L3_114_000G1_scaffold_178_30
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33609..34751
DNA (1143bp) protein (381aa)
chorismate synthase (EC:4.2.3.5)
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605};; 5-enolpyruvylshikimate-3-phosphate phospholyase {ECO:0000256|HAMAP-Rule:MF_00300}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Chorismate synthase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JXH4_9FIRM
Displaying items 1-30 of 198 in total

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