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L3_114_000G1_scaffold_193

Search features with annotation key words

Displaying items 1-30 of 97 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_000G1_scaffold_193_1
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2..133)
DNA (132bp) protein (44aa)
RelA/SpoT domain protein n=1 Tax=Anaerostipes hadrus DSM 3319 RepID=L1Q2Y7_9FIRM
RelA/SpoT domain protein {ECO:0000313|EMBL:EKY22323.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
hypothetical protein
L3_114_000G1_scaffold_193_2
Mycoplasma californicum, Mycoplasma, Mycoplasmatales, Mollicutes, Tenericutes, Bacteria

Not on your lists

355..894
DNA (540bp) protein (180aa)
Type I restriction enzyme EcoDI specificity protein n=1 Tax=Fusobacterium periodonticum 1_1_41FAA RepID=D6LG57_9FUSO
hsdS; Type I restriction modification system specificity subunit HsdS
Type I restriction modification system specificity subunit HsdS {ECO:0000313|EMBL:BAP01220.1}; TaxID=1397850 species="Bacteria; Tenericutes; Mollicutes; Mycoplasmataceae; Mycoplasma.;" source="Mycoplasma californicum HAZ160_1.;"
L3_114_000G1_scaffold_193_3

Not on your lists

comp(873..1490)
DNA (618bp) protein (206aa)
Uncharacterized protein (Fragment) n=2 Tax=human gut metagenome RepID=K1TQ50_9ZZZZ
adenine-specific DNA methylase
Uncharacterized protein {ECO:0000313|EMBL:EKC75227.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L3_114_000G1_scaffold_193_4
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1632..1928)
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Coprococcus comes ATCC 27758 RepID=C0BA94_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG89736.1}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
putative RelE/StbE family addiction module toxin
L3_114_000G1_scaffold_193_5
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1918..2178)
DNA (261bp) protein (87aa)
Prevent-host-death family protein n=1 Tax=Coprococcus comes ATCC 27758 RepID=C0B4G7_9FIRM
Prevent-host-death family protein {ECO:0000313|EMBL:EEG91687.1}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
prevent-host-death family protein
L3_114_000G1_scaffold_193_6
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2278..2490)
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Coprococcus comes ATCC 27758 RepID=C0BA92_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG89734.1}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
L3_114_000G1_scaffold_193_7
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2577..3014)
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Coprococcus comes ATCC 27758 RepID=C0BA91_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG89733.1}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
hypothetical protein
L3_114_000G1_scaffold_193_8
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3161..4531)
DNA (1371bp) protein (457aa)
Amino acid/peptide transporter n=1 Tax=Coprococcus comes ATCC 27758 RepID=C0BA90_9FIRM
Amino acid/peptide transporter {ECO:0000313|EMBL:EEG89732.1}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
amino acid/peptide transporter
L3_114_000G1_scaffold_193_9
unknown

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comp(4470..4643)
DNA (174bp) protein (58aa)

This feature has no annotations

L3_114_000G1_scaffold_193_10
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4942..5373)
DNA (432bp) protein (144aa)
Uncharacterized protein n=2 Tax=Coprococcus RepID=C0BA89_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB84989.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
hypothetical protein
L3_114_000G1_scaffold_193_11
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5449..6897)
DNA (1449bp) protein (483aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00078006}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00077858};; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0000256|HAMAP-Rule:MF_01864}; tRNA-i(6)A37 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01864}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB n=1 Tax=Coprococcus comes CAG:19 RepID=R6LGP8_9FIRM
tRNA-i(6)A37 thiotransferase enzyme MiaB
L3_114_000G1_scaffold_193_12
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6913..7092)
DNA (180bp) protein (60aa)
Uncharacterized protein n=1 Tax=Coprococcus comes CAG:19 RepID=R6LS55_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB84991.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
hypothetical protein
L3_114_000G1_scaffold_193_13
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7110..7649)
DNA (540bp) protein (180aa)
Uncharacterized protein n=2 Tax=Coprococcus RepID=C0BC11_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG89635.1}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
hypothetical protein
L3_114_000G1_scaffold_193_14
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7646..9367)
DNA (1722bp) protein (574aa)
Type II secretory pathway, pullulanase PulA and related glycosidases (EC:3.2.1.-)
Putative glycogen debranching enzyme GlgX n=1 Tax=Coprococcus comes ATCC 27758 RepID=C0BC10_9FIRM
Putative glycogen debranching enzyme GlgX {ECO:0000313|EMBL:EEG89634.1}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
L3_114_000G1_scaffold_193_15
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9358..10350)
DNA (993bp) protein (331aa)
Sugar-binding domain protein n=1 Tax=Coprococcus comes CAG:19 RepID=R6LN50_9FIRM
Sugar-binding domain protein {ECO:0000313|EMBL:CDB84994.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
monosaccharide ABC transporter substrate-binding protein, CUT2 family (TC 3.A.1.2.-)
L3_114_000G1_scaffold_193_16
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10480..10794
DNA (315bp) protein (105aa)
Uncharacterized protein n=2 Tax=Coprococcus RepID=C0BC08_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB84995.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
Protein of unknown function (DUF1292).
L3_114_000G1_scaffold_193_17
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10795..12657)
DNA (1863bp) protein (621aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
Superfamily I DNA and RNA helicases (EC:3.6.1.-)
UvrD/REP helicase n=2 Tax=Coprococcus RepID=R6LS82_9FIRM
L3_114_000G1_scaffold_193_18
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12757..14214)
DNA (1458bp) protein (486aa)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
glutamyl-tRNA synthetase, bacterial family (EC:6.1.1.17)
Glutamate--tRNA ligase n=1 Tax=Coprococcus comes CAG:19 RepID=R6MGI3_9FIRM
L3_114_000G1_scaffold_193_19
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14354..14878)
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Coprococcus comes CAG:19 RepID=R6LBY2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB84998.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
hypothetical protein
L3_114_000G1_scaffold_193_20
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14897..15658)
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Coprococcus comes CAG:19 RepID=R6LN77_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB84999.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
membrane protein
L3_114_000G1_scaffold_193_21
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15905..17059)
DNA (1155bp) protein (385aa)
Fatty acid/phospholipid synthesis protein PlsX n=2 Tax=Coprococcus RepID=C0BC00_9FIRM
Fatty acid/phospholipid synthesis protein PlsX {ECO:0000313|EMBL:EEG89624.1}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
fatty acid/phospholipid biosynthesis protein
L3_114_000G1_scaffold_193_22
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17078..18616)
DNA (1539bp) protein (513aa)
Glycine/sarcosine/betaine reductase complex component C subunit beta n=2 Tax=Coprococcus RepID=R6LS91_9FIRM
Glycine/sarcosine/betaine reductase complex component C subunit beta {ECO:0000313|EMBL:CDB85001.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
hypothetical protein
L3_114_000G1_scaffold_193_23
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18913..19239)
DNA (327bp) protein (109aa)
glycine/sarcosine/betaine reductase complex protein A (EC:1.21.4.4)
Putative glycine/sarcosine/betaine reductase complex component A n=2 Tax=Coprococcus RepID=C0BBZ7_9FIRM
Putative glycine/sarcosine/betaine reductase complex component A {ECO:0000313|EMBL:CDB85002.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
L3_114_000G1_scaffold_193_24
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19255..19386)
DNA (132bp) protein (44aa)
Putative glycine/sarcosine/betaine reductase complex component A n=2 Tax=Coprococcus RepID=C0BBZ6_9FIRM
Putative glycine/sarcosine/betaine reductase complex component A {ECO:0000313|EMBL:EEG89620.1}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
Glycine reductase complex selenoprotein A
L3_114_000G1_scaffold_193_25
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19520..19837)
DNA (318bp) protein (106aa)
Thioredoxin n=2 Tax=Coprococcus RepID=C0BBZ5_9FIRM
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
thioredoxin family protein
L3_114_000G1_scaffold_193_26
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19874..20821)
DNA (948bp) protein (316aa)
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
thioredoxin-disulfide reductase (EC:1.8.1.9)
Thioredoxin reductase n=2 Tax=Coprococcus RepID=C0BBZ4_9FIRM
L3_114_000G1_scaffold_193_27
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20870..21103)
DNA (234bp) protein (78aa)
Selenoprotein B, glycine/betaine/sarcosine/D-proline reductase domain protein n=2 Tax=Coprococcus RepID=C0BBZ3_9FIRM
Selenoprotein B, glycine/betaine/sarcosine/D-proline reductase domain protein {ECO:0000313|EMBL:EEG89617.1}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
glycine reductase complex component B gamma subunit
L3_114_000G1_scaffold_193_28
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21131..22183)
DNA (1053bp) protein (351aa)
Glycine reductase, B {ECO:0000313|EMBL:EEG89616.1}; EC=1.21.4.2 {ECO:0000313|EMBL:EEG89616.1};; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
Glycine reductase, B n=1 Tax=Coprococcus comes ATCC 27758 RepID=C0BBZ2_9FIRM
glycine reductase, selenoprotein B
L3_114_000G1_scaffold_193_29
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22204..23484)
DNA (1281bp) protein (427aa)
Glycine reductase subunit ABC n=1 Tax=Coprococcus comes CAG:19 RepID=R6LBZ9_9FIRM
Glycine reductase subunit ABC {ECO:0000313|EMBL:CDB85008.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
glycine/sarcosine/betaine reductase component B alpha/beta subunit
L3_114_000G1_scaffold_193_30
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23565..23951)
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Coprococcus comes CAG:19 RepID=R6LN95_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB85009.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
hypothetical protein
Displaying items 1-30 of 97 in total

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