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L3_114_000G1_scaffold_225

Search features with annotation key words

Displaying items 1-30 of 101 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_000G1_scaffold_225_1
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1..120
DNA (120bp) protein (40aa)
Acetyltransferase, GNAT family n=2 Tax=Clostridium RepID=B6FJG2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23035.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L3_114_000G1_scaffold_225_2
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

446..1153
DNA (708bp) protein (236aa)
Serine acetyltransferase {ECO:0000256|PIRNR:PIRNR000441}; EC=2.3.1.30 {ECO:0000256|PIRNR:PIRNR000441};; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
serine O-acetyltransferase (EC:2.3.1.30)
Serine acetyltransferase n=2 Tax=Clostridium RepID=B6FJG1_9CLOT
L3_114_000G1_scaffold_225_3
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1119..2546
DNA (1428bp) protein (476aa)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteinyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00041}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
cysteinyl-tRNA synthetase (EC:6.1.1.16)
Cysteine--tRNA ligase n=2 Tax=Clostridium RepID=B6FJG0_9CLOT
L3_114_000G1_scaffold_225_4
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2531..2980
DNA (450bp) protein (150aa)
Mini-ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_01468}; Short=Mini-3 {ECO:0000256|HAMAP-Rule:MF_01468};; Short=Mini-RNase 3 {ECO:0000256|HAMAP-Rule:MF_01468};; EC=3.1.26.- {ECO:0000256|HAMAP-Rule:MF_01468};; Mini-RNase III {ECO:0000256|HAMAP-Rule:MF_01468}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Mini-ribonuclease 3 n=2 Tax=Clostridium RepID=B6FJF9_9CLOT
hypothetical protein
L3_114_000G1_scaffold_225_5
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2990..3742
DNA (753bp) protein (251aa)
rRNA methylase, putative, group 3 (EC:2.1.1.-)
RNA methyltransferase, TrmH family, group 3 n=2 Tax=Clostridium RepID=B6FJF8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23031.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L3_114_000G1_scaffold_225_6
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3759..4373
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PHM4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23030.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
RNA polymerase, sigma 30 subunit, SigH
L3_114_000G1_scaffold_225_7
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5048..6715
DNA (1668bp) protein (556aa)
Glutamine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00126, ECO:0000256|SAAS:SAAS00016670}; EC=6.1.1.18 {ECO:0000256|HAMAP-Rule:MF_00126, ECO:0000256|SAAS:SAAS00023088};; Glutaminyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00126}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
glutaminyl-tRNA synthetase (EC:6.1.1.18)
Glutamine--tRNA ligase n=2 Tax=Clostridium RepID=B6FJF5_9CLOT
L3_114_000G1_scaffold_225_8
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6720..8117
DNA (1398bp) protein (466aa)
Transcriptional regulator, GntR family n=2 Tax=Clostridium RepID=B6FJF4_9CLOT
Transcriptional regulator, GntR family {ECO:0000313|EMBL:EEA83846.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
L3_114_000G1_scaffold_225_9
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8153..8413)
DNA (261bp) protein (87aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FJF3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23027.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L3_114_000G1_scaffold_225_10
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8565..10124
DNA (1560bp) protein (520aa)
Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes (EC:2.7.8.-)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PX71_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23026.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L3_114_000G1_scaffold_225_11
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10285..11475
DNA (1191bp) protein (397aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PHM1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23025.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L3_114_000G1_scaffold_225_12
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11530..12540)
DNA (1011bp) protein (337aa)
Aspartate--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_00555, ECO:0000256|SAAS:SAAS00088413}; EC=6.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00555, ECO:0000256|SAAS:SAAS00088403};; Asparagine synthetase A {ECO:0000256|HAMAP-Rule:MF_00555}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
aspartate--ammonia ligase, AsnA-type (EC:6.3.1.1)
Aspartate--ammonia ligase n=2 Tax=Clostridium RepID=B6FJF0_9CLOT
L3_114_000G1_scaffold_225_13
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12814..12960
DNA (147bp) protein (49aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FJE9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23023.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L3_114_000G1_scaffold_225_14
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12968..13174)
DNA (207bp) protein (69aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FJE8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23022.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L3_114_000G1_scaffold_225_15
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13347..14336
DNA (990bp) protein (330aa)
dihydroxyacetone kinase DhaK subunit (EC:2.7.1.- 2.7.1.121)
Dihydroxyacetone kinase, DhaK subunit n=2 Tax=Clostridium RepID=B6FJE7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23021.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L3_114_000G1_scaffold_225_16
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14358..14981
DNA (624bp) protein (208aa)
dihydroxyacetone kinase DhaL subunit (EC:2.7.1.- 2.7.1.121)
Dihydroxyacetone kinase, L subunit n=2 Tax=Clostridium RepID=B6FJE6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23020.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L3_114_000G1_scaffold_225_17
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14993..15373
DNA (381bp) protein (127aa)
dihydroxyacetone kinase DhaM subunit (EC:2.7.1.121)
Dihydroxyacetone kinase, phosphotransfer subunit n=2 Tax=Clostridium RepID=B6FJE5_9CLOT
Dihydroxyacetone kinase, phosphotransfer subunit {ECO:0000313|EMBL:EEA83837.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
L3_114_000G1_scaffold_225_18
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15483..15983
DNA (501bp) protein (167aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FJE4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23018.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L3_114_000G1_scaffold_225_19
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16101..16733
DNA (633bp) protein (211aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FJE3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA83835.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L3_114_000G1_scaffold_225_20
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16805..17122
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PX63_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23016.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Domain of Unknown Function (DUF1540).
L3_114_000G1_scaffold_225_21
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17212..18564
DNA (1353bp) protein (451aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PHL1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23015.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Predicted permease
L3_114_000G1_scaffold_225_22
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18568..19488
DNA (921bp) protein (307aa)
Homoserine O-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_00295, ECO:0000256|SAAS:SAAS00084556}; EC=2.3.1.46 {ECO:0000256|HAMAP-Rule:MF_00295, ECO:0000256|SAAS:SAAS00084596};; Homoserine O-transsuccinylase {ECO:0000256|HAMAP-Rule:MF_00295}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
homoserine O-succinyltransferase (EC:2.3.1.46)
Homoserine O-succinyltransferase n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FJE0_9CLOT
L3_114_000G1_scaffold_225_23
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19763..19936
DNA (174bp) protein (58aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FJD8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA83830.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
L3_114_000G1_scaffold_225_24
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20124..20558
DNA (435bp) protein (145aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=R6PX58_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23011.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L3_114_000G1_scaffold_225_25
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21057..23177
DNA (2121bp) protein (707aa)
Anaerobic ribonucleoside-triphosphate reductase {ECO:0000313|EMBL:EEA81449.1}; EC=1.17.4.2 {ECO:0000313|EMBL:EEA81449.1};; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
anaerobic ribonucleoside-triphosphate reductase (EC:1.17.4.2)
Anaerobic ribonucleoside-triphosphate reductase n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FRA7_9CLOT
L3_114_000G1_scaffold_225_26
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23179..23676
DNA (498bp) protein (166aa)
Anaerobic ribonucleoside-triphosphate reductase-activating protein {ECO:0000256|PIRNR:PIRNR000368}; EC=1.97.1.- {ECO:0000256|PIRNR:PIRNR000368};; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
ribonucleoside-triphosphate reductase class III activase subunit (EC:1.97.1.4 1.17.4.2)
Anaerobic ribonucleoside-triphosphate reductase-activating protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PHK7_9CLOT
L3_114_000G1_scaffold_225_27
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23660..24172
DNA (513bp) protein (171aa)
deoxyuridine 5'-triphosphate nucleotidohydrolase (EC:3.6.1.23)
DUTP diphosphatase n=2 Tax=Clostridium RepID=B6FRA5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23009.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L3_114_000G1_scaffold_225_28
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24243..25613
DNA (1371bp) protein (457aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PFD9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23008.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Bacillus/Clostridium GerA spore germination protein.
L3_114_000G1_scaffold_225_29
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25735..26598
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6QM47_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23007.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
EDD domain protein, DegV family
L3_114_000G1_scaffold_225_30
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26595..27461
DNA (867bp) protein (289aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FRA2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23006.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
Displaying items 1-30 of 101 in total

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