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L3_114_000G1_scaffold_232

Search features with annotation key words

Displaying items 1-30 of 78 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_000G1_scaffold_232_1
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(136..723)
DNA (588bp) protein (196aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FSM3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA80974.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L3_114_000G1_scaffold_232_2
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

890..1336
DNA (447bp) protein (149aa)
Transcriptional regulator, MarR family n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FSM4_9CLOT
Transcriptional regulator, MarR family {ECO:0000313|EMBL:EEA80975.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L3_114_000G1_scaffold_232_3
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1341..2402
DNA (1062bp) protein (354aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6Q0C1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC24176.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L3_114_000G1_scaffold_232_4
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2417..3247)
DNA (831bp) protein (277aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FSM6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA80977.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L3_114_000G1_scaffold_232_5
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3378..3872
DNA (495bp) protein (165aa)
ogt1; methylated-DNA-[protein]-cysteine S-methyltransferase 1 (EC:2.1.1.63)
Uncharacterized protein n=2 Tax=Clostridium RepID=R6Q0B6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC24171.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L3_114_000G1_scaffold_232_6
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3865..4431)
DNA (567bp) protein (189aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FSM8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC24167.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L3_114_000G1_scaffold_232_7
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4464..4976)
DNA (513bp) protein (171aa)
Acetyltransferase, GNAT family n=2 Tax=Clostridium RepID=B6FSM9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC24166.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
GCN5-like N-acetyltransferase
L3_114_000G1_scaffold_232_8
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4987..5292)
DNA (306bp) protein (102aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=R6Q0A3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC24156.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L3_114_000G1_scaffold_232_9
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5264..6124)
DNA (861bp) protein (287aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6QQD2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC24152.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
transcriptional regulatory protein
L3_114_000G1_scaffold_232_10
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6347..6553
DNA (207bp) protein (69aa)
4Fe-4S binding domain protein n=2 Tax=Clostridium RepID=B6FSN9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC24148.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
ferredoxin
L3_114_000G1_scaffold_232_11
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6550..7161
DNA (612bp) protein (204aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FSP0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA80956.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L3_114_000G1_scaffold_232_12
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7133..7414
DNA (282bp) protein (94aa)
Transcriptional regulator, ArsR family n=2 Tax=Clostridium RepID=B6FSP1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC24140.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
ArsR family transcriptional regulator
L3_114_000G1_scaffold_232_13
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7473..9977)
DNA (2505bp) protein (835aa)
Efflux ABC transporter, permease protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FSP2_9CLOT
Efflux ABC transporter, permease protein {ECO:0000313|EMBL:EEA80944.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L3_114_000G1_scaffold_232_14
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9981..10661)
DNA (681bp) protein (227aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FSP3_9CLOT
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEA80945.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
ABC transporter
L3_114_000G1_scaffold_232_15
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10708..11922)
DNA (1215bp) protein (405aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FSP4_9CLOT
integral membrane sensor signal transduction histidine kinase
L3_114_000G1_scaffold_232_16
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11926..12606)
DNA (681bp) protein (227aa)
Response regulator receiver domain protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FSP5_9CLOT
Response regulator receiver domain protein {ECO:0000313|EMBL:EEA80947.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
two component transcriptional regulator
L3_114_000G1_scaffold_232_17
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12783..13205
DNA (423bp) protein (141aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FSP6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC24135.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L3_114_000G1_scaffold_232_18
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13248..14846)
DNA (1599bp) protein (533aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=R6PTS6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC24134.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L3_114_000G1_scaffold_232_19
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14860..16305)
DNA (1446bp) protein (482aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=R6PIH4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC24133.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Trk-type K+ transport systems, membrane components
L3_114_000G1_scaffold_232_20
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16320..17678)
DNA (1359bp) protein (453aa)
Potassium transporter peripheral membrane component n=2 Tax=Clostridium RepID=B6FSP9_9CLOT
Potassium transporter peripheral membrane component {ECO:0000313|EMBL:EEA80923.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
K+ transport systems, NAD-binding component
L3_114_000G1_scaffold_232_21
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17849..19924)
DNA (2076bp) protein (692aa)
translation elongation factor 2 (EF-2/EF-G) (EC:3.6.5.3)
Putative translation elongation factor G n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FSQ0_9CLOT
Putative translation elongation factor G {ECO:0000313|EMBL:EEA80924.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
L3_114_000G1_scaffold_232_22
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20083..21183
DNA (1101bp) protein (367aa)
Prephenate dehydrogenase (EC:1.3.1.12)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PKQ6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC24130.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L3_114_000G1_scaffold_232_23
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21226..21828)
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PTS1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC24129.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L3_114_000G1_scaffold_232_24
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21825..22106)
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PIH0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC24128.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L3_114_000G1_scaffold_232_25
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22118..23290)
DNA (1173bp) protein (391aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6Q072_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC24126.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Stage II sporulation protein E (SpoIIE).
L3_114_000G1_scaffold_232_26
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23292..25007)
DNA (1716bp) protein (572aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PTR7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC24124.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
PAS domain S-box
L3_114_000G1_scaffold_232_27
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25128..30959)
DNA (5832bp) protein (1944aa)
F5/8 type C domain protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FSQ7_9CLOT
F5/8 type C domain protein {ECO:0000313|EMBL:EEA80931.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
F5/8 type C domain protein
L3_114_000G1_scaffold_232_28
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31154..32902)
DNA (1749bp) protein (583aa)
Hydrogenase, Fe-only {ECO:0000313|EMBL:EEA80933.1}; EC=1.12.-.- {ECO:0000313|EMBL:EEA80933.1};; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hydrogenases, Fe-only (EC:1.6.5.3)
Hydrogenase, Fe-only n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FSQ9_9CLOT
L3_114_000G1_scaffold_232_29
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32919..34799)
DNA (1881bp) protein (627aa)
NADH dehydrogenase (quinone) (EC:1.6.99.5)
4Fe-4S binding domain protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FSR0_9CLOT
4Fe-4S binding domain protein {ECO:0000313|EMBL:EEA80934.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
L3_114_000G1_scaffold_232_30
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34831..35325)
DNA (495bp) protein (165aa)
Respiratory-chain NADH dehydrogenase 24 Kd subunit n=2 Tax=Clostridium RepID=B6FSR1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC24116.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
NADH dehydrogenase (ubiquinone) 24 kDa subunit
Displaying items 1-30 of 78 in total

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