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L3_114_000G1_scaffold_245

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Displaying items 1-30 of 85 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_000G1_scaffold_245_1
Citrobacter sp. KTE151, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..2338
DNA (2337bp) protein (779aa)
Lon protease {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174}; EC=3.4.21.53 {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174};; ATP-dependent protease La {ECO:0000256|HAMAP-Rule:MF_01973}; TaxID=1169322 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. KTE151.;"
Lon protease n=2 Tax=Citrobacter RepID=R8VJF2_9ENTR
DNA-binding protein
L3_114_000G1_scaffold_245_2
Citrobacter sp. KTE151, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2547..2819
DNA (273bp) protein (91aa)
Uncharacterized protein n=13 Tax=Enterobacteriaceae RepID=A8AK13_CITK8
transcriptional regulator HU subunit beta
DNA-binding protein HU-beta {ECO:0000313|EMBL:EOQ50075.1}; TaxID=1169322 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. KTE151.;"
L3_114_000G1_scaffold_245_3
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3023..4897
DNA (1875bp) protein (625aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus.;"
Peptidyl-prolyl cis-trans isomerase D n=2 Tax=Citrobacter RepID=C1M853_9ENTR
molecular chaperone
L3_114_000G1_scaffold_245_4
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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5044..5418
DNA (375bp) protein (125aa)
Competence ComEA helix-hairpin-helix repeat region domain protein n=1 Tax=Shigella flexneri 1235-66 RepID=I6H9D6_SHIFL
Competence ComEA helix-hairpin-helix repeat region domain protein {ECO:0000313|EMBL:EIQ77378.1}; TaxID=766154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri 1235-66.;"
hypothetical protein
L3_114_000G1_scaffold_245_5
Citrobacter sp. KTE151, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5525..5923
DNA (399bp) protein (133aa)
Long-chain acyl-CoA thioesterase tesC n=2 Tax=Citrobacter RepID=R8VHU8_9ENTR
Long-chain acyl-CoA thioesterase tesC {ECO:0000313|EMBL:EOQ50078.1}; TaxID=1169322 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. KTE151.;"
thioesterase
L3_114_000G1_scaffold_245_6
Citrobacter sp. CIP 55.13, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6028..6723)
DNA (696bp) protein (232aa)
7-cyano-7-deazaguanine synthase {ECO:0000256|HAMAP-Rule:MF_01633, ECO:0000256|SAAS:SAAS00195886}; EC=6.3.4.20 {ECO:0000256|HAMAP-Rule:MF_01633, ECO:0000256|SAAS:SAAS00029421};; 7-cyano-7-carbaguanine synthase {ECO:0000256|HAMAP-Rule:MF_01633}; PreQ(0) synthase {ECO:0000256|HAMAP-Rule:MF_01633}; Queuosine biosynthesis protein QueC {ECO:0000256|HAMAP-Rule:MF_01633}; TaxID=1563222 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. CIP 55.13.;"
7-cyano-7-deazaguanine synthase n=7 Tax=Citrobacter RepID=G9SG80_CITFR
queuosine biosynthesis protein QueC
L3_114_000G1_scaffold_245_7
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6788..8488)
DNA (1701bp) protein (567aa)
Putative uncharacterized protein n=1 Tax=Citrobacter freundii 4_7_47CFAA RepID=G9SG81_CITFR
Extracellular solute-binding protein {ECO:0000313|EMBL:ETX64960.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
peptide ABC transporter substrate-binding protein
L3_114_000G1_scaffold_245_8
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8612..9430
DNA (819bp) protein (273aa)
HMP-PP phosphatase {ECO:0000256|HAMAP-Rule:MF_01847, ECO:0000256|SAAS:SAAS00009981}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01847, ECO:0000256|SAAS:SAAS00009979};; TaxID=766154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri 1235-66.;"
HMP-PP phosphatase n=1 Tax=Citrobacter sp. KTE32 RepID=R8VII2_9ENTR
thiamin pyrimidine pyrophosphate hydrolase
L3_114_000G1_scaffold_245_9
Citrobacter youngae, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9482..10537)
DNA (1056bp) protein (352aa)
Pyridoxal-phosphate dependent protein n=1 Tax=Citrobacter youngae ATCC 29220 RepID=D4BD11_9ENTR
Pyridoxal-phosphate dependent protein {ECO:0000313|EMBL:EFE07860.1}; TaxID=500640 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter youngae ATCC 29220.;"
cysteine synthase
L3_114_000G1_scaffold_245_10
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10650..11108
DNA (459bp) protein (153aa)
AsnC family protein n=1 Tax=Shigella flexneri 1235-66 RepID=I6H9E2_SHIFL
AsnC family protein {ECO:0000313|EMBL:EIQ77384.1}; TaxID=766154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri 1235-66.;"
transcriptional regulator
L3_114_000G1_scaffold_245_11
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11153..12925
DNA (1773bp) protein (591aa)
Multidrug resistance-like ATP-binding protein MdlA n=1 Tax=Citrobacter sp. 30_2 RepID=C1M861_9ENTR
Multidrug resistance-like ATP-binding protein MdlA {ECO:0000313|EMBL:ETX64964.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
multidrug ABC transporter ATP-binding protein
L3_114_000G1_scaffold_245_12
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12918..14696
DNA (1779bp) protein (593aa)
Multidrug resistance-like ATP-binding protein MdlB n=1 Tax=Shigella flexneri 1235-66 RepID=I6H9E4_SHIFL
multidrug ABC transporter ATP-binding protein
Multidrug ABC transporter ATP-binding protein {ECO:0000313|EMBL:AHY12283.1}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
L3_114_000G1_scaffold_245_13
Kosakonia sacchari, Kosakonia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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14923..15261
DNA (339bp) protein (113aa)
Nitrogen regulatory protein P-II 2 n=152 Tax=Bacteria RepID=A6T5J4_KLEP7
nitrogen regulatory protein P-II 1
Nitrogen regulatory protein P-II 1 {ECO:0000313|EMBL:AHJ74982.1}; TaxID=1235834 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kosakonia.;" source="Kosakonia sacchari SP1.;"
L3_114_000G1_scaffold_245_14
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15293..16579
DNA (1287bp) protein (429aa)
Ammonia channel n=3 Tax=Citrobacter RepID=C1M864_9ENTR
Ammonium transporter {ECO:0000256|RuleBase:RU362002}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus.;"
ammonium transporter
L3_114_000G1_scaffold_245_15
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16654..17514)
DNA (861bp) protein (287aa)
Acyl-CoA thioesterase 2 n=2 Tax=Citrobacter RepID=C1M865_9ENTR
Acyl-CoA thioesterase 2 {ECO:0000313|EMBL:KDF20827.1}; TaxID=1439318 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii MGH 56.;"
acyl-CoA thioesterase
L3_114_000G1_scaffold_245_16
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17727..18296
DNA (570bp) protein (190aa)
Glycoprotein polysaccharide metabolism n=7 Tax=Citrobacter RepID=J0M148_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:KJC13191.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
hypothetical protein
L3_114_000G1_scaffold_245_17
Citrobacter sp. KTE151, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18327..18638)
DNA (312bp) protein (104aa)
Methylated-DNA methyltransferase n=2 Tax=Salmonella choleraesuis RepID=V1G4G7_SALCE
ybaZ; methylated-DNA methyltransferase
Methyltransferase {ECO:0000313|EMBL:EOQ50090.1}; TaxID=1169322 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. KTE151.;"
L3_114_000G1_scaffold_245_18
Citrobacter sp. CIP 55.13, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18948..20375)
DNA (1428bp) protein (476aa)
Transcriptional regulator, GntR family domain / Aspartate aminotransferase {ECO:0000313|EMBL:CEJ66182.1}; EC=2.6.1.1 {ECO:0000313|EMBL:CEJ66182.1};; TaxID=1563222 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. CIP 55.13.;"
Bacterial regulatory s, gntR family protein n=1 Tax=Shigella flexneri 1235-66 RepID=I6H9F3_SHIFL
DeoR faimly transcriptional regulator
L3_114_000G1_scaffold_245_19
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20464..21075
DNA (612bp) protein (204aa)
Integral membrane protein n=3 Tax=Citrobacter RepID=J0LZJ9_9ENTR
Membrane protein {ECO:0000313|EMBL:KJC08074.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
membrane protein
L3_114_000G1_scaffold_245_20
Citrobacter werkmanii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21158..21511
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Shigella flexneri 1235-66 RepID=I6H9F5_SHIFL
Uncharacterized protein {ECO:0000313|EMBL:GAL45105.1}; TaxID=1114921 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter werkmanii NBRC 105721.;"
RNA signal recognition particle 4.5S RNA
L3_114_000G1_scaffold_245_21
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21565..23118)
DNA (1554bp) protein (518aa)
Uncharacterized protein n=1 Tax=Citrobacter sp. 30_2 RepID=C1M873_9ENTR
EAL domain-containing protein {ECO:0000313|EMBL:ETX64976.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
hypothetical protein
L3_114_000G1_scaffold_245_22
Citrobacter werkmanii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


23303..23563
DNA (261bp) protein (87aa)
50S ribosomal protein L31 type B n=2 Tax=Citrobacter RepID=R8VHW7_9ENTR
50S ribosomal protein L31
50S ribosomal protein L31 type B {ECO:0000256|HAMAP-Rule:MF_00502, ECO:0000256|SAAS:SAAS00004504}; TaxID=1114921 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter werkmanii NBRC 105721.;"
L3_114_000G1_scaffold_245_23
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23779..24252)
DNA (474bp) protein (158aa)
Inner membrane protein ylaC n=1 Tax=Citrobacter sp. 30_2 RepID=C1M876_9ENTR
Membrane protein {ECO:0000313|EMBL:KEY49683.1}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus.;"
membrane protein
L3_114_000G1_scaffold_245_24
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24525..24743)
DNA (219bp) protein (73aa)
Hemolysin expression modulating protein n=158 Tax=Bacteria RepID=K4H6I3_KLEPN
hemolysin expression modulating protein
Hemolysin expression-modulating protein {ECO:0000313|EMBL:EWD85193.1}; TaxID=1400171 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella pneumoniae UCI 18.;"
L3_114_000G1_scaffold_245_25
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24771..25145)
DNA (375bp) protein (125aa)
Uncharacterized protein n=12 Tax=Enterobacteriaceae RepID=C1M879_9ENTR
Hha toxicity attenuator
Protein that modulates Hha toxicity {ECO:0000313|EMBL:EIQ77404.1}; TaxID=766154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri 1235-66.;"
L3_114_000G1_scaffold_245_26
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25634..28783)
DNA (3150bp) protein (1050aa)
Acriflavine resistance protein B n=6 Tax=Citrobacter RepID=J1FX66_9ENTR
multidrug transporter
Multidrug transporter {ECO:0000313|EMBL:AHY12300.1}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
L3_114_000G1_scaffold_245_27
Citrobacter sp. CIP 55.13, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28806..29999)
DNA (1194bp) protein (398aa)
Acriflavine resistance protein A n=1 Tax=Citrobacter sp. 30_2 RepID=C1M881_9ENTR
Membrane fusion protein of RND family multidrug efflux pump {ECO:0000313|EMBL:CEJ66171.1}; TaxID=1563222 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. CIP 55.13.;"
multidrug transporter
L3_114_000G1_scaffold_245_28
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30141..30785
DNA (645bp) protein (215aa)
HTH-type transcriptional regulator AcrR n=2 Tax=Citrobacter RepID=R8VNB3_9ENTR
Transcriptional regulator {ECO:0000313|EMBL:KKC61980.1}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus.;"
transcriptional regulator
L3_114_000G1_scaffold_245_29
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30912..34274
DNA (3363bp) protein (1121aa)
Potassium efflux system KefA n=1 Tax=Shigella flexneri 1235-66 RepID=I6H9G6_SHIFL
Potassium efflux system KefA {ECO:0000313|EMBL:EIQ77408.1}; TaxID=766154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri 1235-66.;"
hypothetical protein
L3_114_000G1_scaffold_245_30
Citrobacter youngae, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34314..35225)
DNA (912bp) protein (304aa)
Uncharacterized protein n=1 Tax=Citrobacter youngae ATCC 29220 RepID=D4BCY5_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:EFE08471.1}; TaxID=500640 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter youngae ATCC 29220.;"
transposase
Displaying items 1-30 of 85 in total

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