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L3_114_000G1_scaffold_254

Search features with annotation key words

Displaying items 1-30 of 106 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_000G1_scaffold_254_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..297
DNA (297bp) protein (99aa)
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase {ECO:0000256|PIRNR:PIRNR006181}; EC=4.2.-.- {ECO:0000256|PIRNR:PIRNR006181};; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TQT1_CLOP1
ybaK/ebsC protein
L3_114_000G1_scaffold_254_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

338..490
DNA (153bp) protein (51aa)
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RJL9_CLOPF
hypothetical protein
YbaK/ebsC protein {ECO:0000313|EMBL:EIA17131.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_114_000G1_scaffold_254_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(617..1003)
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BX38_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT13737.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
hypothetical protein
L3_114_000G1_scaffold_254_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1191..1562
DNA (372bp) protein (124aa)
Uncharacterized protein n=7 Tax=Clostridium perfringens RepID=H7CW35_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT13743.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_114_000G1_scaffold_254_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1725..3374
DNA (1650bp) protein (550aa)
NlpC/P60 family protein n=2 Tax=Clostridium perfringens RepID=B1BX36_CLOPF
NlpC/P60 family protein {ECO:0000313|EMBL:EDT13733.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
entB; enterotoxin
L3_114_000G1_scaffold_254_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3515..4117
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens F262 RepID=H7CW33_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EIA17127.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
hypothetical protein
L3_114_000G1_scaffold_254_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4368..4931)
DNA (564bp) protein (188aa)
Putative adenylate cyclase n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BX35_CLOPF
Putative adenylate cyclase {ECO:0000313|EMBL:EDT13735.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
adenylate cyclase
L3_114_000G1_scaffold_254_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5071..6114
DNA (1044bp) protein (348aa)
Uncharacterized protein n=5 Tax=Clostridium perfringens RepID=H7CW31_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA17125.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_114_000G1_scaffold_254_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6161..7027)
DNA (867bp) protein (289aa)
fba; fructose-1,6-bisphosphate aldolase, class II (EC:4.1.2.13)
Fructose-1,6-bisphosphate aldolase, class II n=11 Tax=Clostridium perfringens RepID=H7CW30_CLOPF
Fructose-1,6-bisphosphate aldolase, class II {ECO:0000313|EMBL:EIA17124.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_114_000G1_scaffold_254_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7124..7558)
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BX32_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT13734.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
hypothetical protein
L3_114_000G1_scaffold_254_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7543..8253)
DNA (711bp) protein (237aa)
Uncharacterized protein n=3 Tax=Clostridium perfringens RepID=Q8XKP6_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB81054.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_114_000G1_scaffold_254_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8384..10039
DNA (1656bp) protein (552aa)
Phosphoribulokinase n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BX30_CLOPF
Phosphoribulokinase {ECO:0000313|EMBL:EDT13731.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
uridine kinase
L3_114_000G1_scaffold_254_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10227..11723)
DNA (1497bp) protein (499aa)
Galactose-1-phosphate uridylyltransferase {ECO:0000256|HAMAP-Rule:MF_00571}; Short=Gal-1-P uridylyltransferase {ECO:0000256|HAMAP-Rule:MF_00571};; EC=2.7.7.12 {ECO:0000256|HAMAP-Rule:MF_00571};; UDP-glucose--hexose-1-phosphate uridylyltransferase {ECO:0000256|HAMAP-Rule:MF_00571}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
galT; galactose-1-phosphate uridylyltransferase (EC:2.7.7.12)
Galactose-1-phosphate uridylyltransferase n=2 Tax=Clostridium perfringens RepID=B1BX29_CLOPF
L3_114_000G1_scaffold_254_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11810..12973)
DNA (1164bp) protein (388aa)
galK; galactokinase (EC:2.7.1.6)
Galactokinase {ECO:0000256|HAMAP-Rule:MF_00246, ECO:0000256|SAAS:SAAS00025843}; EC=2.7.1.6 {ECO:0000256|HAMAP-Rule:MF_00246, ECO:0000256|SAAS:SAAS00015833};; Galactose kinase {ECO:0000256|HAMAP-Rule:MF_00246}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
Galactokinase n=5 Tax=Clostridium perfringens RepID=GAL1_CLOP1
L3_114_000G1_scaffold_254_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13178..14221
DNA (1044bp) protein (348aa)
Aldose 1-epimerase {ECO:0000256|PIRNR:PIRNR005096}; EC=5.1.3.3 {ECO:0000256|PIRNR:PIRNR005096};; Galactose mutarotase {ECO:0000256|PIRNR:PIRNR005096}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
Aldose 1-epimerase n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BX27_CLOPF
aldose 1-epimerase
L3_114_000G1_scaffold_254_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14540..15568)
DNA (1029bp) protein (343aa)
Beta-methylgalactoside transporter inner membrane component n=8 Tax=Clostridium perfringens RepID=H7CW23_CLOPF
mglC; beta-methylgalactoside transporter inner membrane protein
Galactoside ABC transporter, permease protein {ECO:0000313|EMBL:EDT25862.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L3_114_000G1_scaffold_254_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15540..17087)
DNA (1548bp) protein (516aa)
Galactose/methyl galactoside import ATP-binding protein MglA {ECO:0000256|HAMAP-Rule:MF_01717}; EC=3.6.3.17 {ECO:0000256|HAMAP-Rule:MF_01717};; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
Galactose/methyl galactoside import ATP-binding protein MglA n=4 Tax=Clostridium perfringens RepID=MGLA_CLOP1
mglA; galactose/methyl galaxtoside transporter ATP-binding protein
L3_114_000G1_scaffold_254_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17162..18226)
DNA (1065bp) protein (355aa)
Putative galactoside ABC transporter, galactoside-binding protein n=3 Tax=Clostridium perfringens RepID=H7CW21_CLOPF
galactoside ABC transporter galactoside-binding protein
Putative galactoside ABC transporter, galactoside-binding protein {ECO:0000313|EMBL:EIA17115.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_114_000G1_scaffold_254_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18444..19457
DNA (1014bp) protein (338aa)
LacI family transcriptional regulator n=4 Tax=Clostridium perfringens RepID=H7CW20_CLOPF
LacI family transcriptional regulator
Transcriptional regulator, LacI family {ECO:0000313|EMBL:EDT25540.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L3_114_000G1_scaffold_254_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19575..20414)
DNA (840bp) protein (280aa)
Phospholipase, patatin family n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BY10_CLOPF
Phospholipase, patatin family {ECO:0000313|EMBL:EDT13405.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
patatin family phospholipase
L3_114_000G1_scaffold_254_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20722..21516
DNA (795bp) protein (265aa)
Phosphomethylpyrimidine kinase {ECO:0000313|EMBL:EDT13412.1}; EC=2.7.4.7 {ECO:0000313|EMBL:EDT13412.1};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
Phosphomethylpyrimidine kinase n=2 Tax=Clostridium perfringens RepID=B1BY11_CLOPF
thiD; phosphomethylpyrimidine kinase
L3_114_000G1_scaffold_254_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21528..22325
DNA (798bp) protein (266aa)
Hydroxyethylthiazole kinase {ECO:0000256|HAMAP-Rule:MF_00228, ECO:0000256|SAAS:SAAS00137030}; EC=2.7.1.50 {ECO:0000256|HAMAP-Rule:MF_00228, ECO:0000256|SAAS:SAAS00137030};; 4-methyl-5-beta-hydroxyethylthiazole kinase {ECO:0000256|HAMAP-Rule:MF_00228}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
thiM; hydroxyethylthiazole kinase (EC:2.7.1.50)
Hydroxyethylthiazole kinase n=2 Tax=Clostridium perfringens RepID=H7CW17_CLOPF
L3_114_000G1_scaffold_254_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22318..22941
DNA (624bp) protein (208aa)
Thiamine-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; Short=TP synthase {ECO:0000256|HAMAP-Rule:MF_00097};; Short=TPS {ECO:0000256|HAMAP-Rule:MF_00097};; EC=2.5.1.3 {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826};; Thiamine-phosphate pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
Thiamine-phosphate synthase n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BY13_CLOPF
thiE; thiamine-phosphate pyrophosphorylase
L3_114_000G1_scaffold_254_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23171..24949
DNA (1779bp) protein (593aa)
ATP-dependent DNA helicase RecQ {ECO:0000313|EMBL:EDS81794.1}; EC=3.6.1.- {ECO:0000313|EMBL:EDS81794.1};; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
recQ; ATP-dependent DNA helicase RecQ (EC:3.6.1.-)
ATP-dependent DNA helicase RecQ n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BY14_CLOPF
L3_114_000G1_scaffold_254_25
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25039..26961
DNA (1923bp) protein (641aa)
Serine protein kinase {ECO:0000313|EMBL:EDT13409.1}; EC=2.7.11.1 {ECO:0000313|EMBL:EDT13409.1};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
prkA; serine protein kinase (EC:2.7.11.1)
Serine protein kinase n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BY15_CLOPF
L3_114_000G1_scaffold_254_26
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26965..28152
DNA (1188bp) protein (396aa)
UPF0229 protein AC3_1738 n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BY16_CLOPF
UPF0229 protein yhbH {ECO:0000256|HAMAP-Rule:MF_01232}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
yhbH; hypothetical protein
L3_114_000G1_scaffold_254_27
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28170..29519
DNA (1350bp) protein (450aa)
Stage V sporulation protein R n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BY17_CLOPF
Stage V sporulation protein R {ECO:0000313|EMBL:EDT13402.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
spoVR; stage V sporulation protein R
L3_114_000G1_scaffold_254_28
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29571..30107
DNA (537bp) protein (179aa)
Rubrerythrin n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BY18_CLOPF
Rubrerythrin {ECO:0000313|EMBL:EDT13408.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
rubrerythrin
L3_114_000G1_scaffold_254_29
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30129..30479
DNA (351bp) protein (117aa)
Uncharacterized protein n=7 Tax=Clostridium perfringens RepID=B1BLT6_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT13406.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_114_000G1_scaffold_254_30
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30526..31047)
DNA (522bp) protein (174aa)
pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase (EC:2.7.8.8)
CDP-diacylglycerol--serine O-phosphatidyltransferase {ECO:0000313|EMBL:EDT13401.1}; EC=2.7.8.8 {ECO:0000313|EMBL:EDT13401.1};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
CDP-diacylglycerol--serine O-phosphatidyltransferase n=10 Tax=Clostridium perfringens RepID=H7CW09_CLOPF
Displaying items 1-30 of 106 in total

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