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L3_114_000G1_scaffold_264

Search features with annotation key words

Displaying items 1-30 of 94 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_000G1_scaffold_264_1
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(438..545)
DNA (108bp) protein (36aa)
Uncharacterized protein n=4 Tax=Erysipelotrichaceae RepID=H1AXK1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC85301.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
L3_114_000G1_scaffold_264_2
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(545..934)
DNA (390bp) protein (130aa)
Uncharacterized protein n=4 Tax=Firmicutes RepID=H1AXK2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC85302.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
filamentation induced by cAMP protein fic
L3_114_000G1_scaffold_264_3
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(1246..1758)
DNA (513bp) protein (171aa)
acetolactate synthase, small subunit (EC:2.2.1.6)
Acetolactate synthase, small subunit n=7 Tax=Firmicutes RepID=E4LVU9_9CLOT
Acetolactate synthase, small subunit {ECO:0000313|EMBL:ENY88240.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
L3_114_000G1_scaffold_264_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1793..3514)
DNA (1722bp) protein (574aa)
Acetolactate synthase {ECO:0000256|RuleBase:RU003591}; EC=2.2.1.6 {ECO:0000256|RuleBase:RU003591};; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
acetolactate synthase, large subunit, biosynthetic type (EC:2.2.1.6)
Acetolactate synthase n=5 Tax=Firmicutes RepID=E4LVV0_9CLOT
L3_114_000G1_scaffold_264_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3805..4674)
DNA (870bp) protein (290aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
map; methionine aminopeptidase, type I (EC:3.4.11.18)
Methionine aminopeptidase n=4 Tax=Firmicutes RepID=E4LVV1_9CLOT
L3_114_000G1_scaffold_264_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4887..6566
DNA (1680bp) protein (560aa)
Uncharacterized protein n=5 Tax=Firmicutes RepID=E4LVV2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EQJ51610.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
hypothetical protein
L3_114_000G1_scaffold_264_7
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(6622..7500)
DNA (879bp) protein (293aa)
Uncharacterized protein n=6 Tax=Firmicutes RepID=E4LVV3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHO31994.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
hypothetical protein
L3_114_000G1_scaffold_264_8
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(7982..8869)
DNA (888bp) protein (296aa)
Tagatose-bisphosphate aldolase (EC:4.1.2.40)
Uncharacterized protein n=6 Tax=Firmicutes RepID=G1VVE1_9FIRM
Ketose-bisphosphate aldolase {ECO:0000313|EMBL:ENY88245.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
L3_114_000G1_scaffold_264_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8888..9931)
DNA (1044bp) protein (348aa)
L-threonine 3-dehydrogenase (EC:1.1.1.103)
Uncharacterized protein n=3 Tax=Firmicutes RepID=H1B5J4_9FIRM
Zinc-binding dehydrogenase family protein {ECO:0000313|EMBL:EQJ51613.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
L3_114_000G1_scaffold_264_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9924..11084)
DNA (1161bp) protein (387aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=H1B5J3_9FIRM
Iron-containing alcohol dehydrogenase family protein {ECO:0000313|EMBL:EQJ51614.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
alcohol dehydrogenase, class IV
L3_114_000G1_scaffold_264_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11096..11932)
DNA (837bp) protein (279aa)
Uncharacterized protein n=4 Tax=Firmicutes RepID=H1AXL1_9FIRM
PTS system mannose/fructose/sorbose IID component family protein {ECO:0000313|EMBL:EQJ51615.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
PTS system mannose/fructose/sorbose family IID component
L3_114_000G1_scaffold_264_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11929..12684)
DNA (756bp) protein (252aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=H1B5J1_9FIRM
PTS system sorbose-specific iic component family protein {ECO:0000313|EMBL:EQJ51616.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
Phosphotransferase system PTS sorbose-specific IIC subunit
L3_114_000G1_scaffold_264_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12700..13182)
DNA (483bp) protein (161aa)
Uncharacterized protein n=3 Tax=Firmicutes RepID=H1AXL3_9FIRM
PTS system sorbose subIIB component family protein {ECO:0000313|EMBL:EQJ51617.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
PTS system sorbose subfamily transporter subunit IIB
L3_114_000G1_scaffold_264_14
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(13185..13586)
DNA (402bp) protein (134aa)
PTS system fructose IIA component n=7 Tax=Firmicutes RepID=E4LVW0_9CLOT
PTS system, mannose/fructose/sorbose family, IIA component {ECO:0000313|EMBL:ENY88251.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
PTS system fructose subfamily IIA component
L3_114_000G1_scaffold_264_15
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13862..16297
DNA (2436bp) protein (812aa)
PRD domain protein n=3 Tax=Firmicutes RepID=E4LVW1_9CLOT
PRD domain protein {ECO:0000313|EMBL:EFR37016.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
sigma-54 interacting domain-containing protein
L3_114_000G1_scaffold_264_16
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

16599..17918
DNA (1320bp) protein (440aa)
Uncharacterized protein n=5 Tax=Firmicutes RepID=E4LVW2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC85316.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
ATP/GTP-binding protein
L3_114_000G1_scaffold_264_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18065..19735)
DNA (1671bp) protein (557aa)
Formate--tetrahydrofolate ligase {ECO:0000256|HAMAP-Rule:MF_01543}; EC=6.3.4.3 {ECO:0000256|HAMAP-Rule:MF_01543};; Formyltetrahydrofolate synthetase {ECO:0000256|HAMAP-Rule:MF_01543}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
Formate-tetrahydrofolate ligase (EC:6.3.4.3)
Formate--tetrahydrofolate ligase n=3 Tax=Firmicutes RepID=H1AXL7_9FIRM
L3_114_000G1_scaffold_264_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19787..21019)
DNA (1233bp) protein (411aa)
Phosphoribosylamine--glycine ligase {ECO:0000256|HAMAP-Rule:MF_00138}; EC=6.3.4.13 {ECO:0000256|HAMAP-Rule:MF_00138};; GARS {ECO:0000256|HAMAP-Rule:MF_00138}; Glycinamide ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; Phosphoribosylglycinamide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
phosphoribosylamine--glycine ligase (EC:6.3.4.13)
Phosphoribosylamine--glycine ligase n=1 Tax=Clostridium difficile P28 RepID=T4N8R3_CLODI
L3_114_000G1_scaffold_264_19
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21238..21948)
DNA (711bp) protein (237aa)
Uncharacterized protein n=4 Tax=Firmicutes RepID=E4LVW5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EQJ51625.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
L3_114_000G1_scaffold_264_20
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(21935..22663)
DNA (729bp) protein (243aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=R6ULH4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC85320.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
L3_114_000G1_scaffold_264_21
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22660..23403)
DNA (744bp) protein (248aa)
Uncharacterized protein n=1 Tax=Clostridium difficile P28 RepID=T4N8I5_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQJ51627.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
L3_114_000G1_scaffold_264_22
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23400..24095)
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Clostridium difficile P28 RepID=T4N2M8_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQJ51628.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
L3_114_000G1_scaffold_264_23
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(24108..24554)
DNA (447bp) protein (149aa)
Uncharacterized protein n=7 Tax=Firmicutes RepID=G1VVG2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ENY88266.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
lytR; Sensory transduction protein LytR
L3_114_000G1_scaffold_264_24
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

24728..24937
DNA (210bp) protein (70aa)
DNA-binding helix-turn-helix protein n=7 Tax=Firmicutes RepID=E4LVX0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHO31977.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
transcriptional regulator
L3_114_000G1_scaffold_264_25
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24934..25350
DNA (417bp) protein (139aa)
Uncharacterized protein n=4 Tax=Firmicutes RepID=H1AXM5_9FIRM
Putative membrane protein {ECO:0000313|EMBL:EQJ51631.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
L3_114_000G1_scaffold_264_26
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25574..26680
DNA (1107bp) protein (369aa)
Uncharacterized protein n=4 Tax=Firmicutes RepID=E4LVX3_9CLOT
Serine hydrolase family protein {ECO:0000313|EMBL:EQJ51633.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
hypothetical protein
L3_114_000G1_scaffold_264_27
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(27078..27197)
DNA (120bp) protein (40aa)
Uncharacterized protein n=4 Tax=Firmicutes RepID=E4LVX6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC85328.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
L3_114_000G1_scaffold_264_28
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(27258..27596)
DNA (339bp) protein (113aa)
PTS system, Lactose/Cellobiose specific IIA subunit n=7 Tax=Firmicutes RepID=E4LVX7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY88272.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
PTS system lactose/cellobiose-specific transporter subunit IIA
L3_114_000G1_scaffold_264_29
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27914..28528)
DNA (615bp) protein (205aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=R6ULI7_9FIRM
Bacterial regulatory s, tetR family protein {ECO:0000313|EMBL:EQJ51638.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
TetR family transcriptional regulator
L3_114_000G1_scaffold_264_30
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

28648..29160
DNA (513bp) protein (171aa)
Uncharacterized protein n=2 Tax=Erysipelotrichaceae RepID=H1B5H3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC85331.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
hypothetical protein
Displaying items 1-30 of 94 in total

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