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L3_114_000G1_scaffold_275

Search features with annotation key words

Displaying items 1-30 of 90 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_000G1_scaffold_275_1
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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2389..3138
DNA (750bp) protein (250aa)
MATE efflux family protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MMY5_9FIRM
multidrug resistance protein, MATE family, drug/sodium antiporter
Multidrug resistance protein, MATE family,drug/sodium antiporter {ECO:0000313|EMBL:CCO05033.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_114_000G1_scaffold_275_2
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3135..3629
DNA (495bp) protein (165aa)
MATE efflux family protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MMY5_9FIRM
multidrug resistance protein, MATE family, drug/sodium antiporter
MATE efflux family protein {ECO:0000313|EMBL:EDS00915.1}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
L3_114_000G1_scaffold_275_3
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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3646..3786
DNA (141bp) protein (47aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris ATCC 29176 RepID=B5CQ24_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDY32625.1}; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
L3_114_000G1_scaffold_275_4
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4005..4469
DNA (465bp) protein (155aa)
NUDIX hydrolase n=1 Tax=Clostridium sp. CAG:122 RepID=R5RMC8_9CLOT
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO05034.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_114_000G1_scaffold_275_5
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4489..5220
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:122 RepID=R5RT51_9CLOT
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO05035.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_114_000G1_scaffold_275_6
unknown

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5230..5340
DNA (111bp) protein (37aa)

This feature has no annotations

L3_114_000G1_scaffold_275_7
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5357..7915
DNA (2559bp) protein (853aa)
Small GTP-binding protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TGD6_9FIRM
Small GTP-binding protein {ECO:0000313|EMBL:CDC66931.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
tetP; tetracycline resistance protein TetP
L3_114_000G1_scaffold_275_8
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7957..8136)
DNA (180bp) protein (60aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U819_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO05037.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_114_000G1_scaffold_275_9
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8151..9344)
DNA (1194bp) protein (398aa)
Sodium/glutamate symporter n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T0G8_9FIRM
Sodium/glutamate symporter {ECO:0000313|EMBL:CDC66933.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
gltS; Sodium/glutamate symporter
L3_114_000G1_scaffold_275_10
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9341..10303)
DNA (963bp) protein (321aa)
TRAP transporter solute receptor TAXI family n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TB54_9FIRM
TRAP transporter solute receptor, TAXI family
TRAP transporter solute receptor, TAXI family {ECO:0000313|EMBL:CCO05039.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_114_000G1_scaffold_275_11
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10454..13135)
DNA (2682bp) protein (894aa)
Transglutaminase-like protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T3Z8_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO05040.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_114_000G1_scaffold_275_12
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13146..14339)
DNA (1194bp) protein (398aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TGE2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC66936.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein
L3_114_000G1_scaffold_275_13
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14351..15358)
DNA (1008bp) protein (336aa)
ATPase of unknown function (EC:3.6.3.-)
ATPase associated with various cellular activities AAA_3 n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U832_9FIRM
ATPase associated with various cellular activities AAA_3 {ECO:0000313|EMBL:CDC66937.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L3_114_000G1_scaffold_275_14
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15540..16475
DNA (936bp) protein (312aa)
AAA ATPase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T0H3_9FIRM
spoIIIAA; Stage III sporulation protein AA
Stage III sporulation protein AA {ECO:0000313|EMBL:CCO05043.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_114_000G1_scaffold_275_15
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16477..16965
DNA (489bp) protein (163aa)
Stage III sporulation protein AB SpoIIIAB n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TB59_9FIRM
spoIIIAB; stage III sporulation protein SpoAB
Stage III sporulation protein SpoAB {ECO:0000313|EMBL:CCO05044.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_114_000G1_scaffold_275_16
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17006..17203
DNA (198bp) protein (66aa)
Stage III sporulation protein AC n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T403_9FIRM
spoIIIAC; Stage III sporulation protein AC
Stage III sporulation protein AC {ECO:0000313|EMBL:CDC66940.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L3_114_000G1_scaffold_275_17
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17203..17589
DNA (387bp) protein (129aa)
Putative stage III sporulation protein AD n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TGE7_9FIRM
spoIIIAD; Stage III sporulation protein AD
Stage III sporulation protein AD {ECO:0000313|EMBL:CCO05046.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_114_000G1_scaffold_275_18
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17599..18738
DNA (1140bp) protein (380aa)
Putative stage III sporulation protein AE n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U837_9FIRM
spoIIIAE; Stage III sporulation protein AE
Stage III sporulation protein AE {ECO:0000313|EMBL:CCO05047.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_114_000G1_scaffold_275_19
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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18740..19210
DNA (471bp) protein (157aa)
Conserved domain protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T0H9_9FIRM
spoIIIAF; stage III sporulation protein SpoAF
Stage III sporulation protein SpoAF {ECO:0000313|EMBL:CCO05048.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_114_000G1_scaffold_275_20
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19214..19765
DNA (552bp) protein (184aa)
Stage III sporulation protein AG n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TB64_9FIRM
Stage III sporulation protein AG {ECO:0000313|EMBL:CDC66944.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
spoIIIAG; Stage III sporulation protein AG
L3_114_000G1_scaffold_275_21
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19784..20326
DNA (543bp) protein (181aa)
Stage III sporulation protein AH n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T406_9FIRM
spoIIIAH; Stage III sporulation protein AH
Stage III sporulation protein AH {ECO:0000313|EMBL:CCO05050.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_114_000G1_scaffold_275_22
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20454..20810
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TGF1_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO05051.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_114_000G1_scaffold_275_23
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20846..21259
DNA (414bp) protein (138aa)
N utilization substance protein B homolog n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U843_9FIRM
nusB; transcription antitermination factor NusB
N utilization substance protein B homolog {ECO:0000256|HAMAP-Rule:MF_00073, ECO:0000256|SAAS:SAAS00057003}; Short=Protein NusB {ECO:0000256|HAMAP-Rule:MF_00073};; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_114_000G1_scaffold_275_24
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21256..22197
DNA (942bp) protein (314aa)
probableO-sialoglycoprotein endopeptidase (EC:3.4.24.57)
ProbableO-sialoglycoprotein endopeptidase {ECO:0000313|EMBL:CCO05053.1}; EC=3.4.24.57 {ECO:0000313|EMBL:CCO05053.1};; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
Peptidase M22 glycoprotease n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T0I4_9FIRM
L3_114_000G1_scaffold_275_25
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22194..23387
DNA (1194bp) protein (398aa)
xseA; Exodeoxyribonuclease VII large subunit (EC:3.1.11.6)
Exodeoxyribonuclease 7 large subunit {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195504}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195506};; Exodeoxyribonuclease VII large subunit {ECO:0000256|HAMAP-Rule:MF_00378}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
Exodeoxyribonuclease 7 large subunit n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TB70_9FIRM
L3_114_000G1_scaffold_275_26
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23401..23589
DNA (189bp) protein (63aa)
Exodeoxyribonuclease 7 small subunit {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198685}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198686};; Exodeoxyribonuclease VII small subunit {ECO:0000256|HAMAP-Rule:MF_00337}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
Exodeoxyribonuclease 7 small subunit n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T413_9FIRM
xseB; Exodeoxyribonuclease VII small subunit
L3_114_000G1_scaffold_275_27
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23582..24475
DNA (894bp) protein (298aa)
crtE; geranylgeranyl pyrophosphate synthase (EC:2.5.1.29)
Polyprenyl synthetase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TGF7_9FIRM
Polyprenyl synthetase {ECO:0000313|EMBL:CDC66951.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L3_114_000G1_scaffold_275_28
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24501..26357
DNA (1857bp) protein (619aa)
dxs1; 1-deoxy-D-xylulose-5-phosphate synthase (EC:2.2.1.7)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U848_9FIRM
L3_114_000G1_scaffold_275_29
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26350..27156
DNA (807bp) protein (269aa)
Hemolysin A n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T0J0_9FIRM
hemolysin TlyA family protein
Hemolysin TlyA family protein {ECO:0000313|EMBL:CCO05058.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_114_000G1_scaffold_275_30
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27176..28051
DNA (876bp) protein (292aa)
NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037468}; EC=2.7.1.23 {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037533};; ATP-dependent NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
nadF; NAD+ kinase (EC:2.7.1.23)
Probable inorganic polyphosphate/ATP-NAD kinase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TB75_9FIRM
Displaying items 1-30 of 90 in total

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