ggKbase home page

L3_114_000G1_scaffold_328

Search features with annotation key words

Displaying items 1-30 of 137 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_000G1_scaffold_328_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1..180
DNA (180bp) protein (60aa)
Polysaccharide biosynthesis protein n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V3X8_CLOPF
capsular polysaccharide synthesis protein
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:EDT25887.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L3_114_000G1_scaffold_328_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

202..2625
DNA (2424bp) protein (808aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CNB5_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:BAB80330.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
hypothetical protein
L3_114_000G1_scaffold_328_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2755..4407
DNA (1653bp) protein (551aa)
Cell wall binding repeat protein/zinc carboxypeptidase family n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BF17_CLOPF
Cell wall binding repeat protein/zinc carboxypeptidase family {ECO:0000313|EMBL:EDS81619.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
cell wall binding repeat-containing protein/zinc carboxypeptidase
L3_114_000G1_scaffold_328_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4609..5973
DNA (1365bp) protein (455aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XMR2_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB80332.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_114_000G1_scaffold_328_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6178..8046
DNA (1869bp) protein (623aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CNC0_CLOPF
Transcriptional regulator, MarR family/choline/ethanolamine kinase {ECO:0000313|EMBL:EDT25864.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
licA; choline kinase
L3_114_000G1_scaffold_328_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8072..9040
DNA (969bp) protein (323aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CNC1_CLOPF
licB; lic-1 operon protein
Lic-1 operon protein {ECO:0000313|EMBL:EIA17870.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_114_000G1_scaffold_328_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9187..9870
DNA (684bp) protein (228aa)
Nucleotidyl transferase family protein n=2 Tax=Clostridium perfringens RepID=Q0TTH7_CLOP1
licC; lic-1 operon protein
Probable lic-1 operon protein {ECO:0000313|EMBL:BAB80335.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_114_000G1_scaffold_328_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9990..11222)
DNA (1233bp) protein (411aa)
Cell wall binding repeat protein n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1RBV2_CLOPF
Cell wall binding repeat protein {ECO:0000313|EMBL:EDT22291.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
cell wall binding repeat-containing protein
L3_114_000G1_scaffold_328_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11341..12360)
DNA (1020bp) protein (340aa)
Putative transcriptional regulator n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1RBV1_CLOPF
Putative transcriptional regulator {ECO:0000313|EMBL:EDT22301.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
PBP5 synthesis regulator protein
L3_114_000G1_scaffold_328_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12639..13913)
DNA (1275bp) protein (425aa)
Branched-chain amino acid transport system II carrier protein n=5 Tax=Clostridium perfringens RepID=Q0TTH4_CLOP1
brnQ; branched-chain amino acid transport system II carrier protein
Branched-chain amino acid transport system II carrier protein {ECO:0000313|EMBL:EDT22299.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
L3_114_000G1_scaffold_328_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14665..15663
DNA (999bp) protein (333aa)
trpS; tryptophanyl-tRNA synthetase (EC:6.1.1.2)
Tryptophan--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_00140}; EC=6.1.1.2 {ECO:0000255|HAMAP-Rule:MF_00140};; Tryptophanyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00140}; Short=TrpRS {ECO:0000255|HAMAP-Rule:MF_00140};; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
Tryptophan--tRNA ligase n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RTA3_CLOPF
L3_114_000G1_scaffold_328_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16184..16834
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BLR0_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDS79268.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
hypothetical protein
L3_114_000G1_scaffold_328_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16932..18044
DNA (1113bp) protein (371aa)
Putative arylsulfatase regulator n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RJJ3_CLOPF
anaerobic sulfatase-maturase
Putative arylsulfatase regulator {ECO:0000313|EMBL:EDT71467.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
L3_114_000G1_scaffold_328_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18246..19076
DNA (831bp) protein (277aa)
Phosphate ABC transporter, phosphate-binding protein n=2 Tax=Clostridium perfringens RepID=B1BLQ8_CLOPF
Phosphate ABC transporter, phosphate-binding protein {ECO:0000313|EMBL:EDS79266.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
phosphate ABC transporter substrate-binding protein
L3_114_000G1_scaffold_328_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19300..20118
DNA (819bp) protein (273aa)
Phosphate binding protein n=2 Tax=Clostridium perfringens RepID=H1CND0_CLOPF
phosphate ABC transporter substrate-binding protein
Probable phosphate ABC transporter {ECO:0000313|EMBL:BAB80343.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_114_000G1_scaffold_328_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20200..21087
DNA (888bp) protein (296aa)
Phosphate ABC transporter, permease protein PstC n=4 Tax=Clostridium perfringens RepID=Q0TTG8_CLOP1
pstC; phosphate ABC transporter permease
Phosphate ABC transporter, permease protein PstC {ECO:0000313|EMBL:EDS79270.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
L3_114_000G1_scaffold_328_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21090..21914
DNA (825bp) protein (275aa)
Phosphate ABC transporter, permease protein PstA n=4 Tax=Clostridium perfringens RepID=Q0TTG7_CLOP1
pstA; phosphate ABC transporter permease
Phosphate ABC transporter, permease protein PstA {ECO:0000313|EMBL:EDT14550.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_114_000G1_scaffold_328_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21932..22693
DNA (762bp) protein (254aa)
Phosphate import ATP-binding protein PstB {ECO:0000255|HAMAP-Rule:MF_01702}; EC=3.6.3.27 {ECO:0000255|HAMAP-Rule:MF_01702};; ABC phosphate transporter {ECO:0000255|HAMAP-Rule:MF_01702}; Phosphate-transporting ATPase {ECO:0000255|HAMAP-Rule:MF_01702}; TaxID=195103 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain ATCC 13124 / DSM 756 / JCM 1290 /; NCIMB 6125 / NCTC 8237 / Type A).;"
Phosphate import ATP-binding protein PstB n=11 Tax=Clostridium perfringens RepID=PSTB_CLOP1
phosphate transporter ATP-binding protein
L3_114_000G1_scaffold_328_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22718..23371
DNA (654bp) protein (218aa)
Phosphate-specific transport system accessory protein PhoU n=6 Tax=Clostridium perfringens RepID=H7CT81_CLOPF
phoU; phosphate transporter PhoU
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_114_000G1_scaffold_328_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23531..24226
DNA (696bp) protein (232aa)
DNA-binding response regulator n=3 Tax=Clostridium perfringens RepID=B1BUW8_CLOPF
DNA-binding response regulator
DNA-binding response regulator {ECO:0000313|EMBL:EDT71473.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
L3_114_000G1_scaffold_328_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24397..25020)
DNA (624bp) protein (208aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=B1RBT9_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT22294.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
hypothetical protein
L3_114_000G1_scaffold_328_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25054..25470)
DNA (417bp) protein (139aa)
Flavodoxin n=2 Tax=Clostridium perfringens RepID=H7CT84_CLOPF
flavodoxin
Flavodoxin {ECO:0000313|EMBL:EIA17886.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_114_000G1_scaffold_328_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25884..27542)
DNA (1659bp) protein (553aa)
Glutamine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00126, ECO:0000256|SAAS:SAAS00016670}; EC=6.1.1.18 {ECO:0000256|HAMAP-Rule:MF_00126, ECO:0000256|SAAS:SAAS00023088};; Glutaminyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00126}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
glnS; glutaminyl-tRNA synthetase (EC:6.1.1.18)
Glutamine--tRNA ligase n=4 Tax=Clostridium perfringens RepID=SYQ_CLOP1
L3_114_000G1_scaffold_328_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27795..27950)
DNA (156bp) protein (52aa)
Uncharacterized protein n=10 Tax=Clostridium perfringens RepID=H7CT86_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT26824.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L3_114_000G1_scaffold_328_25
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28105..29193)
DNA (1089bp) protein (363aa)
Spore germination protein n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TTF9_CLOP1
spore germination protein
Uncharacterized protein {ECO:0000313|EMBL:BAB80353.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_114_000G1_scaffold_328_26
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29289..30710
DNA (1422bp) protein (474aa)
Spore germination protein n=6 Tax=Clostridium perfringens RepID=Q0TTF8_CLOP1
spore germination protein
Spore germination protein KA {ECO:0000313|EMBL:BAB80354.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_114_000G1_scaffold_328_27
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30685..31809
DNA (1125bp) protein (375aa)
Spore germination protein n=8 Tax=Clostridium perfringens RepID=H7CT89_CLOPF
spore germination protein
Spore germination protein B3 {ECO:0000313|EMBL:BAB80355.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_114_000G1_scaffold_328_28
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32004..33137
DNA (1134bp) protein (378aa)
AAA domain family protein n=4 Tax=Clostridium perfringens RepID=B1BL86_CLOPF
AAA domain family protein {ECO:0000313|EMBL:EDT16401.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
ATPase AAA
L3_114_000G1_scaffold_328_29
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33213..33626
DNA (414bp) protein (138aa)
Conserved domain protein n=2 Tax=Clostridium perfringens RepID=B1RGR3_CLOPF
Conserved domain protein {ECO:0000313|EMBL:EDT26810.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
hypothetical protein
L3_114_000G1_scaffold_328_30
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33922..35142
DNA (1221bp) protein (407aa)
tyrS; tyrosyl-tRNA synthetase (EC:6.1.1.1)
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02006}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
Tyrosine--tRNA ligase n=3 Tax=Clostridium perfringens RepID=SYY_CLOPE
Displaying items 1-30 of 137 in total

View Taxonomy