ggKbase home page

L3_114_000G1_scaffold_345

Search features with annotation key words

Displaying items 1-30 of 61 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_000G1_scaffold_345_1
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

277..1029
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2D462_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:ERI76262.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
putative deacylase
L3_114_000G1_scaffold_345_2
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1539..3356)
DNA (1818bp) protein (606aa)
Gamma-glutamyltransferase n=2 Tax=Clostridium symbiosum RepID=U2BWT7_CLOSY
Gamma-glutamyltransferase {ECO:0000313|EMBL:EGA95621.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
gamma-glutamyltransferase
L3_114_000G1_scaffold_345_3
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3455..4600)
DNA (1146bp) protein (382aa)
Succinylglutamate desuccinylase/aspartoacylase n=2 Tax=Clostridium symbiosum RepID=E7GHX4_CLOSY
Succinylglutamate desuccinylase/aspartoacylase {ECO:0000313|EMBL:EGA95622.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L3_114_000G1_scaffold_345_4
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4611..4757)
DNA (147bp) protein (49aa)
Uncharacterized protein n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2BVJ6_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:ERI76265.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
L3_114_000G1_scaffold_345_5
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4776..6053)
DNA (1278bp) protein (426aa)
TRAP C4-dicarboxylate transport system permease DctM subunit n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GHX5_CLOSY
TRAP C4-dicarboxylate transport system permease DctM subunit {ECO:0000313|EMBL:EGA95623.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L3_114_000G1_scaffold_345_6
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6072..6710)
DNA (639bp) protein (213aa)
Uncharacterized protein n=2 Tax=Clostridium symbiosum RepID=E9SIN7_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:ERI76267.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
hypothetical protein
L3_114_000G1_scaffold_345_7
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6884..7513)
DNA (630bp) protein (210aa)
Putative uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GHX7_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA95625.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
Response regulator of citrate/malate metabolism
L3_114_000G1_scaffold_345_8
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7494..8903)
DNA (1410bp) protein (470aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
putative two-component histidine kinase (EC:2.7.13.3)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=2 Tax=Clostridium symbiosum RepID=U2BDS0_CLOSY
L3_114_000G1_scaffold_345_9
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9158..9883)
DNA (726bp) protein (242aa)
Putative uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GI58_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA95474.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
Response regulator of the LytR/AlgR family
L3_114_000G1_scaffold_345_10
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10188..10382)
DNA (195bp) protein (65aa)
Uncharacterized protein n=2 Tax=Clostridium symbiosum RepID=E9SIN1_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA95475.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
L3_114_000G1_scaffold_345_11
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11218..11550)
DNA (333bp) protein (111aa)
Uncharacterized protein n=2 Tax=Clostridium symbiosum RepID=E9SIN0_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA95476.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L3_114_000G1_scaffold_345_12
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11856..22001)
DNA (10146bp) protein (3382aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FF32_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF05000.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
RHS repeat-associated core domain-containing protein
L3_114_000G1_scaffold_345_13
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22373..23047)
DNA (675bp) protein (225aa)
H(+)-transporting ATP synthase, vacuolar type, subunit D (EC:3.6.3.14)
V-type ATP synthase subunit D n=2 Tax=Clostridium symbiosum RepID=E7GI62_CLOSY
V-type ATP synthase subunit D {ECO:0000256|HAMAP-Rule:MF_00271}; V-ATPase subunit D {ECO:0000256|HAMAP-Rule:MF_00271}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
L3_114_000G1_scaffold_345_14
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23066..24436)
DNA (1371bp) protein (457aa)
Archaeal/vacuolar-type H+-ATPase subunit B (EC:3.6.3.14)
V-type ATP synthase beta chain n=4 Tax=Clostridium RepID=E7GI63_CLOSY
V-type ATP synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00310}; V-ATPase subunit B {ECO:0000256|HAMAP-Rule:MF_00310}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
L3_114_000G1_scaffold_345_15
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24437..26206)
DNA (1770bp) protein (590aa)
V-type ATP synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00309}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_00309};; V-ATPase subunit A {ECO:0000256|HAMAP-Rule:MF_00309}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
Archaeal/vacuolar-type H+-ATPase subunit A (EC:3.6.3.14)
V-type ATP synthase alpha chain n=4 Tax=Clostridium RepID=E7GI64_CLOSY
L3_114_000G1_scaffold_345_16
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26247..26570)
DNA (324bp) protein (108aa)
Archaeal/vacuolar-type H+-ATPase subunit F (EC:3.6.3.14)
ATP synthase subunit n=4 Tax=Clostridium RepID=E7GI65_CLOSY
ATP synthase subunit {ECO:0000313|EMBL:EGA95481.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
L3_114_000G1_scaffold_345_17
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26563..27540)
DNA (978bp) protein (326aa)
Archaeal/vacuolar-type H+-ATPase subunit C (EC:3.6.3.14)
ATP synthase subunit n=3 Tax=Clostridium RepID=G5FF27_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EGA95482.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
L3_114_000G1_scaffold_345_18
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27565..28158)
DNA (594bp) protein (198aa)
Archaeal/vacuolar-type H+-ATPase subunit E (EC:3.6.3.14)
V-type proton ATPase subunit E n=4 Tax=Clostridium RepID=E7GI67_CLOSY
V-type proton ATPase subunit E {ECO:0000256|HAMAP-Rule:MF_00311}; V-ATPase subunit E {ECO:0000256|HAMAP-Rule:MF_00311}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
L3_114_000G1_scaffold_345_19
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28216..28683)
DNA (468bp) protein (156aa)
ATP synthase subunit C. (EC:3.6.3.14)
V-type sodium ATP synthase subunit K n=4 Tax=Clostridium RepID=E7GI68_CLOSY
V-type sodium ATPase, K subunit {ECO:0000313|EMBL:ERI80101.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
L3_114_000G1_scaffold_345_20
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28685..30700)
DNA (2016bp) protein (672aa)
Archaeal/vacuolar-type H+-ATPase subunit I (EC:3.6.3.14)
V-type sodium ATP synthase subunit I n=3 Tax=Clostridium RepID=E7GI69_CLOSY
V-type ATP synthase subunit I {ECO:0000256|RuleBase:RU361189}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
L3_114_000G1_scaffold_345_21
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30736..31044)
DNA (309bp) protein (103aa)
Vacuolar (H+)-ATPase G subunit. (EC:3.6.3.14)
Uncharacterized protein n=4 Tax=Clostridium RepID=E9SIL9_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA95486.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
L3_114_000G1_scaffold_345_22
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31459..32352)
DNA (894bp) protein (298aa)
Integral membrane domain-containing protein n=4 Tax=Clostridium RepID=E7GI71_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF05040.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
hypothetical protein
L3_114_000G1_scaffold_345_23
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32540..33865)
DNA (1326bp) protein (442aa)
Citrate transporter n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GI72_CLOSY
Citrate transporter {ECO:0000313|EMBL:EGA95488.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
citrate transporter
L3_114_000G1_scaffold_345_24
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33912..34802)
DNA (891bp) protein (297aa)
3-hydroxyacyl-CoA dehydrogenase (EC:1.1.1.157 1.1.1.35)
3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GI73_CLOSY
3-hydroxyacyl-CoA dehydrogenase {ECO:0000313|EMBL:EGA95489.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
L3_114_000G1_scaffold_345_25
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34842..36029)
DNA (1188bp) protein (396aa)
acetyl-CoA acetyltransferase (EC:2.3.1.9)
Acetyl-CoA acetyltransferase n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GI74_CLOSY
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:EGA95490.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
L3_114_000G1_scaffold_345_26
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36433..37227
DNA (795bp) protein (265aa)
short chain enoyl-CoA hydratase (EC:4.2.1.17 4.2.1.55)
Putative uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GI75_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA95491.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
L3_114_000G1_scaffold_345_27
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37272..38480
DNA (1209bp) protein (403aa)
Putative uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GI76_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA95492.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
Predicted acyl-CoA transferases/carnitine dehydratase
L3_114_000G1_scaffold_345_28
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

38509..39792
DNA (1284bp) protein (428aa)
Putative R-phenyllactate dehydratase, medium subunit n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2DF94_CLOSY
Putative R-phenyllactate dehydratase, medium subunit {ECO:0000313|EMBL:ERI80112.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB
L3_114_000G1_scaffold_345_29
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

39794..40921
DNA (1128bp) protein (376aa)
(R)-2-hydroxyacyl-CoA dehydratase subunit (EC:4.2.1.-)
Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GI78_CLOSY
Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit {ECO:0000313|EMBL:EGA95494.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
L3_114_000G1_scaffold_345_30
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

41041..42462
DNA (1422bp) protein (474aa)
PAS domain S-box n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GI79_CLOSY
PAS domain S-box {ECO:0000313|EMBL:EGA95495.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
PAS domain S-box
Displaying items 1-30 of 61 in total

View Taxonomy