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L3_114_000G1_scaffold_349

Search features with annotation key words

Displaying items 1-30 of 70 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_000G1_scaffold_349_1
Clostridium sp. CAG:411, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..1566)
DNA (1566bp) protein (522aa)
Glycosidases (EC:3.2.1.20)
Putative neopullulanase 1 n=1 Tax=Clostridium sp. CAG:411 RepID=R7HV80_9CLOT
Putative neopullulanase 1 {ECO:0000313|EMBL:CDE42137.1}; TaxID=1262802 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:411.;"
L3_114_000G1_scaffold_349_2
Clostridium sp. CAG:590, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2106..3968)
DNA (1863bp) protein (621aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=1262825 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:590.;"
ATP-dependent metalloprotease FtsH (EC:3.6.4.3)
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Clostridium sp. CAG:590 RepID=R5EA99_9CLOT
L3_114_000G1_scaffold_349_3
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4066..4584)
DNA (519bp) protein (173aa)
hypoxanthine phosphoribosyltransferase (EC:2.4.2.8)
Hypoxanthine phosphoribosyltransferase n=2 Tax=Clostridiales RepID=D4M068_9FIRM
Hypoxanthine phosphoribosyltransferase {ECO:0000313|EMBL:CDC16521.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
L3_114_000G1_scaffold_349_4
Lachnospiraceae bacterium 3-2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4577..6052)
DNA (1476bp) protein (492aa)
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161};; tRNA(Ile)-2-lysyl-cytidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; tRNA(Ile)-lysidine synthetase {ECO:0000256|HAMAP-Rule:MF_01161}; TaxID=1235799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-2.;"
tRNA(Ile)-lysidine synthetase, N-terminal domain/tRNA(Ile)-lysidine synthetase, C-terminal domain (EC:6.3.4.-)
tRNA(Ile)-lysidine synthase n=1 Tax=Lachnospiraceae bacterium 3-2 RepID=R9MGY9_9FIRM
L3_114_000G1_scaffold_349_5
Clostridium sp. CAG:411, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6174..8549)
DNA (2376bp) protein (792aa)
stage II sporulation protein E, protein serine/threonine phosphatase (EC:3.1.3.16)
Protein serine/threonine phosphatase n=1 Tax=Clostridium sp. CAG:411 RepID=R7HTQ2_9CLOT
Protein serine/threonine phosphatase {ECO:0000313|EMBL:CDE42348.1}; TaxID=1262802 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:411.;"
L3_114_000G1_scaffold_349_6
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8927..9226)
DNA (300bp) protein (100aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=V8BSB6_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49611.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Septum formation initiator.
L3_114_000G1_scaffold_349_7
Roseburia sp. CAG:182, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9230..9625)
DNA (396bp) protein (132aa)
Spore cortex protein YabQ (Spore_YabQ) n=1 Tax=Roseburia sp. CAG:182 RepID=R7R183_9FIRM
Spore cortex protein YabQ (Spore_YabQ) {ECO:0000313|EMBL:CDF43305.1}; TaxID=1262942 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:182.;"
Spore cortex protein YabQ (Spore_YabQ).
L3_114_000G1_scaffold_349_8
Lachnospiraceae bacterium 3-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9634..9918)
DNA (285bp) protein (95aa)
Sporulation protein YabP n=1 Tax=Lachnospiraceae bacterium 3-1 RepID=R9IV60_9FIRM
Sporulation protein YabP {ECO:0000313|EMBL:EOS25789.1}; TaxID=397288 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-1.;"
sporulation protein YabP
L3_114_000G1_scaffold_349_9
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9988..10227)
DNA (240bp) protein (80aa)
S4 domain protein n=4 Tax=Clostridiales RepID=A7B660_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD18076.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)
L3_114_000G1_scaffold_349_10
Clostridium sp. CAG:264, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10470..10853)
DNA (384bp) protein (128aa)
DNA-binding protein HU n=2 Tax=Clostridium RepID=A7VGT7_9CLOT
DNA-binding protein HU {ECO:0000313|EMBL:CCY61276.1}; TaxID=1262786 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:264.;"
Bacterial nucleoid DNA-binding protein
L3_114_000G1_scaffold_349_11
Firmicutes bacterium CAG:555, Firmicutes, Bacteria

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comp(11136..11675)
DNA (540bp) protein (180aa)
Putative stage V sporulation protein T n=1 Tax=Firmicutes bacterium CAG:555 RepID=R5CS91_9FIRM
Putative stage V sporulation protein T {ECO:0000313|EMBL:CCX70805.1}; TaxID=1263030 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:555.;"
AbrB family transcriptional regulator
L3_114_000G1_scaffold_349_12
Anaerostipes caccae, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11807..12919)
DNA (1113bp) protein (371aa)
PPIC-type PPIASE domain protein n=3 Tax=Anaerostipes RepID=B0MFR3_9FIRM
PPIC-type PPIASE domain protein {ECO:0000313|EMBL:EDR96933.1}; TaxID=411490 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes caccae DSM 14662.;"
PPIC-type PPIASE domain.
L3_114_000G1_scaffold_349_13
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13019..16582)
DNA (3564bp) protein (1188aa)
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
Transcription-repair-coupling factor n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GJW5_9FIRM
transcription-repair coupling factor
L3_114_000G1_scaffold_349_14
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16623..17195)
DNA (573bp) protein (191aa)
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673};; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
peptidyl-tRNA hydrolase (EC:3.1.1.29)
Peptidyl-tRNA hydrolase n=1 Tax=Clostridium hathewayi 12489931 RepID=N9X545_9CLOT
L3_114_000G1_scaffold_349_15
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17261..17497)
DNA (237bp) protein (79aa)
Glycosyltransferase, group 2 family protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2AU38_9CLOT
Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:ERI69354.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
Glycosyltransferases, probably involved in cell wall biogenesis
L3_114_000G1_scaffold_349_16
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18052..18858
DNA (807bp) protein (269aa)
Transporter, MotA/TolQ/ExbB proton channel family protein n=1 Tax=Clostridium sp. MSTE9 RepID=J0WX58_9CLOT
Flagellar motor component {ECO:0000313|EMBL:EXG86835.1}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
flagellar motor rotation protein MotA
L3_114_000G1_scaffold_349_17
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18873..19589
DNA (717bp) protein (239aa)
Putative chemotaxis protein MotB n=1 Tax=Clostridium sp. MSTE9 RepID=J0WX39_9CLOT
Flagellar motor protein {ECO:0000313|EMBL:EXG86834.1}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
motB; flagellar motor protein MotB
L3_114_000G1_scaffold_349_18
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19732..20004)
DNA (273bp) protein (91aa)
Putative septation protein SpoVG n=1 Tax=Clostridium sp. CAG:7 RepID=R5J327_9CLOT
Putative septation protein SpoVG {ECO:0000256|HAMAP-Rule:MF_00819}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
SpoVG family protein
L3_114_000G1_scaffold_349_19
Clostridium sp. CAG:590, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20028..21152)
DNA (1125bp) protein (375aa)
Glucose-1-phosphate adenylyltransferase {ECO:0000256|SAAS:SAAS00083544}; EC=2.7.7.27 {ECO:0000256|SAAS:SAAS00083544};; TaxID=1262825 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:590.;"
ADP-glucose pyrophosphorylase (EC:2.7.7.27)
Putative glucose-1-phosphate adenylyltransferase GlgD subunit n=1 Tax=Clostridium sp. CAG:590 RepID=R5EE13_9CLOT
L3_114_000G1_scaffold_349_20
Firmicutes bacterium CAG:212, Firmicutes, Bacteria

Not on your lists

comp(21149..22423)
DNA (1275bp) protein (425aa)
Glucose-1-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00624, ECO:0000256|RuleBase:RU003565}; EC=2.7.7.27 {ECO:0000256|HAMAP-Rule:MF_00624, ECO:0000256|RuleBase:RU003565};; ADP-glucose pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00624}; ADP-glucose synthase {ECO:0000256|HAMAP-Rule:MF_00624}; TaxID=1263009 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:212.;"
glucose-1-phosphate adenylyltransferase (EC:2.7.7.27)
Glucose-1-phosphate adenylyltransferase n=1 Tax=Firmicutes bacterium CAG:212 RepID=R5Y1N3_9FIRM
L3_114_000G1_scaffold_349_21
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22707..24092
DNA (1386bp) protein (462aa)
UDP-N-acetylmuramate--L-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344}; EC=6.3.2.8 {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344};; UDP-N-acetylmuramoyl-L-alanine synthetase {ECO:0000256|HAMAP-Rule:MF_00046}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
UDP-N-acetylmuramate--L-alanine ligase (EC:6.3.2.8)
UDP-N-acetylmuramate--L-alanine ligase n=1 Tax=Eubacterium hallii CAG:12 RepID=R6GAZ6_9FIRM
L3_114_000G1_scaffold_349_22
Blautia hydrogenotrophica, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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24456..25541
DNA (1086bp) protein (362aa)
Uncharacterized protein n=2 Tax=Blautia RepID=R5BW27_9FIRM
Putative uncharacterized protein {ECO:0000313|EMBL:EEG47356.1}; TaxID=476272 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hydrogenotrophica DSM 10507.;"
hypothetical protein
L3_114_000G1_scaffold_349_23
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25575..26573
DNA (999bp) protein (333aa)
Replicative DNA helicase loader DnaI n=4 Tax=Clostridiales RepID=D4MTS4_9FIRM
replicative DNA helicase loader DnaI
Uncharacterized protein {ECO:0000313|EMBL:EFV15499.1}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
L3_114_000G1_scaffold_349_24
Clostridium sp. CAG:632, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26768..27958
DNA (1191bp) protein (397aa)
ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
Ribose-phosphate diphosphokinase n=1 Tax=Clostridium sp. CAG:632 RepID=R5K1Z2_9CLOT
Ribose-phosphate diphosphokinase {ECO:0000313|EMBL:CCY59094.1}; TaxID=1262830 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:632.;"
L3_114_000G1_scaffold_349_25
Clostridium sp. CAG:411, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28025..30415)
DNA (2391bp) protein (797aa)
Penicillin-binding protein 1A family n=1 Tax=Clostridium sp. CAG:411 RepID=R7I026_9CLOT
Penicillin-binding protein 1A family {ECO:0000313|EMBL:CDE44583.1}; TaxID=1262802 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:411.;"
penicillin-binding protein, 1A family
L3_114_000G1_scaffold_349_26
Firmicutes bacterium CAG:56, Firmicutes, Bacteria

Not on your lists

comp(30436..32235)
DNA (1800bp) protein (600aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:56 RepID=R6BJ52_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA64278.1}; TaxID=1263031 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:56.;"
hypothetical protein
L3_114_000G1_scaffold_349_27
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32254..33306)
DNA (1053bp) protein (351aa)
Ser/Thr phosphatase family protein n=1 Tax=Lachnospiraceae bacterium CAG:25 RepID=R5Z3J6_9FIRM
Ser/Thr phosphatase family protein {ECO:0000313|EMBL:CDA31299.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
metallophosphoesterase
L3_114_000G1_scaffold_349_28
Clostridium sp. CAG:632, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33437..35971)
DNA (2535bp) protein (845aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:632 RepID=R5KFG5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY59707.1}; TaxID=1262830 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:632.;"
hypothetical protein
L3_114_000G1_scaffold_349_29
Blautia sp. CAG:52, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35968..37119)
DNA (1152bp) protein (384aa)
Uncharacterized protein n=1 Tax=Blautia sp. CAG:52 RepID=R6H5U0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB21662.1}; TaxID=1262758 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:52.;"
hypothetical protein
L3_114_000G1_scaffold_349_30
Clostridium sp. CAG:590, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(37323..37751)
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:590 RepID=R5DZJ7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX85613.1}; TaxID=1262825 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:590.;"
hypothetical protein
Displaying items 1-30 of 70 in total

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