ggKbase home page

L3_114_000G1_scaffold_392

Search features with annotation key words

Displaying items 1-30 of 180 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_000G1_scaffold_392_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1..405
DNA (405bp) protein (135aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CRJ0_CLOPF
Acetylxylan esterase {ECO:0000313|EMBL:EIA16877.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
acetylxylan esterase
L3_114_000G1_scaffold_392_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

501..824
DNA (324bp) protein (108aa)
Thioredoxin family protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BXL3_CLOPF
thioredoxin
Thioredoxin family protein {ECO:0000313|EMBL:EDT13568.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_114_000G1_scaffold_392_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

984..2693
DNA (1710bp) protein (570aa)
Putative membrane protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BXL4_CLOPF
Putative membrane protein {ECO:0000313|EMBL:EDT13566.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
hypothetical protein
L3_114_000G1_scaffold_392_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3041..3808
DNA (768bp) protein (256aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BXL5_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT13585.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
hypothetical protein
L3_114_000G1_scaffold_392_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4001..4492)
DNA (492bp) protein (164aa)
Uncharacterized protein n=3 Tax=Clostridium perfringens RepID=Q8XK12_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB81297.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_114_000G1_scaffold_392_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4489..5259)
DNA (771bp) protein (257aa)
Uncharacterized protein n=6 Tax=Clostridium perfringens RepID=Q8XK13_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB81296.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_114_000G1_scaffold_392_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5472..6209
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RS10_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT27070.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
hypothetical protein
L3_114_000G1_scaffold_392_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6289..8283
DNA (1995bp) protein (665aa)
1,4-alpha-glucan branching enzyme GlgB {ECO:0000256|HAMAP-Rule:MF_00685}; EC=2.4.1.18 {ECO:0000256|HAMAP-Rule:MF_00685};; 1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase {ECO:0000256|HAMAP-Rule:MF_00685}; Alpha-(1->4)-glucan branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; Glycogen branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
glgB; glycogen branching protein (EC:2.4.1.18)
1,4-alpha-glucan branching enzyme GlgB n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V4S7_CLOPF
L3_114_000G1_scaffold_392_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8383..11577
DNA (3195bp) protein (1065aa)
Putative pullulanase n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BUX5_CLOPF
Putative pullulanase {ECO:0000313|EMBL:EDT14472.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
pulB; pullulanase
L3_114_000G1_scaffold_392_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11719..12042
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BUX4_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT14489.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
hypothetical protein
L3_114_000G1_scaffold_392_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12088..12540)
DNA (453bp) protein (151aa)
Rhodanese domain-containing protein n=9 Tax=Clostridium perfringens RepID=H7CWW6_CLOPF
rhodanese domain-containing protein
Rhodanese domain protein {ECO:0000313|EMBL:EDT71192.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
L3_114_000G1_scaffold_392_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12760..12972
DNA (213bp) protein (71aa)
UPF0397 protein CPE1584 n=6 Tax=Clostridium perfringens RepID=Y1584_CLOPE
hypothetical protein
UPF0397 protein AC1_1985 {ECO:0000256|HAMAP-Rule:MF_01572}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
L3_114_000G1_scaffold_392_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13044..13232
DNA (189bp) protein (63aa)
UPF0397 protein HA1_09736 n=4 Tax=Clostridium perfringens RepID=H7CWW5_CLOPF
hypothetical protein
UPF0397 protein AC3_2046 {ECO:0000256|HAMAP-Rule:MF_01572}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_114_000G1_scaffold_392_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13378..15084
DNA (1707bp) protein (569aa)
Putative cobalt ABC transporter, ATP-binding protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BUX1_CLOPF
Putative cobalt ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDT14484.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
ABC transporter
L3_114_000G1_scaffold_392_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15084..15914
DNA (831bp) protein (277aa)
Putative cobalt ABC transporter, permease protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BUX0_CLOPF
Putative cobalt ABC transporter, permease protein {ECO:0000313|EMBL:EDT14473.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
cobalt ABC transporter permease
L3_114_000G1_scaffold_392_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16410..17231
DNA (822bp) protein (274aa)
Esterase, homolog n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BV21_CLOPF
Esterase, homolog {ECO:0000313|EMBL:EDT14470.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
lipase
L3_114_000G1_scaffold_392_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17785..18897
DNA (1113bp) protein (371aa)
Bmp family lipoprotein n=9 Tax=Clostridium perfringens RepID=H7CWW1_CLOPF
Bmp family lipoprotein
Bmp family lipoprotein {ECO:0000313|EMBL:EIA16862.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_114_000G1_scaffold_392_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19038..20573
DNA (1536bp) protein (512aa)
ABC transporter, ATP-binding protein n=10 Tax=Clostridium perfringens RepID=H7CWW0_CLOPF
ABC transporter ATP-binding protein
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDT14460.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_114_000G1_scaffold_392_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20563..21660
DNA (1098bp) protein (366aa)
ABC transporter, permease protein n=10 Tax=Clostridium perfringens RepID=H7CWV9_CLOPF
ABC transporter permease
ABC transporter, permease protein {ECO:0000313|EMBL:EDT27056.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L3_114_000G1_scaffold_392_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21660..22613
DNA (954bp) protein (318aa)
ABC transporter, permease protein n=9 Tax=Clostridium perfringens RepID=H7CWV8_CLOPF
ABC transporter permease
ABC transporter, permease protein {ECO:0000313|EMBL:EDT71166.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
L3_114_000G1_scaffold_392_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22815..23183
DNA (369bp) protein (123aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=B1BGE5_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT14490.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
hypothetical protein
L3_114_000G1_scaffold_392_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23435..24724
DNA (1290bp) protein (430aa)
Xanthine/uracil permease family protein n=4 Tax=Clostridium perfringens RepID=H7CWV6_CLOPF
Xanthine/uracil permease family protein {ECO:0000313|EMBL:EDT24749.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
xanthine/uracil permease
L3_114_000G1_scaffold_392_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24853..25788
DNA (936bp) protein (312aa)
Phospholipase, patatin family n=8 Tax=Clostridium perfringens RepID=Q0TQ30_CLOP1
patatin family phospholipase
Phospholipase, patatin family {ECO:0000313|EMBL:EDT14483.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_114_000G1_scaffold_392_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26185..28524
DNA (2340bp) protein (780aa)
gshAB; bifunctional glutamate--cysteine ligase/glutathione synthetase (EC:6.3.2.2 6.3.2.3)
Glutathione biosynthesis bifunctional protein GshAB n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BV13_CLOPF
Glutathione biosynthesis bifunctional protein GshAB {ECO:0000256|HAMAP-Rule:MF_00782}; Gamma-GCS-GS {ECO:0000256|HAMAP-Rule:MF_00782}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_114_000G1_scaffold_392_25
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28768..29433)
DNA (666bp) protein (222aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=Q8XK31_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB81278.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_114_000G1_scaffold_392_26
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29579..30280
DNA (702bp) protein (234aa)
Putative lipoprotein n=2 Tax=Clostridium perfringens RepID=B1BGE0_CLOPF
Putative lipoprotein {ECO:0000313|EMBL:EDT14497.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
lipoprotein
L3_114_000G1_scaffold_392_27
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30366..31079
DNA (714bp) protein (238aa)
Phage shock protein A n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BV10_CLOPF
Phage shock protein A {ECO:0000313|EMBL:EDT14454.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
pspA; phage shock protein A
L3_114_000G1_scaffold_392_28
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31375..32205
DNA (831bp) protein (277aa)
HAD hydrolase, IIB family n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BV09_CLOPF
HAD hydrolase, IIB family {ECO:0000313|EMBL:EDT14458.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
HAD hydrolase
L3_114_000G1_scaffold_392_29
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32318..32722
DNA (405bp) protein (135aa)
Uncharacterized protein n=7 Tax=Clostridium perfringens RepID=H7CWU9_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA16850.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_114_000G1_scaffold_392_30
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32900..33532
DNA (633bp) protein (211aa)
Peptidyl-prolyl cis-trans isomerase, cyclophilin-type n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BV07_CLOPF
Peptidyl-prolyl cis-trans isomerase, cyclophilin-type {ECO:0000313|EMBL:EDT14467.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
ppiB; cyclophilin type peptidyl-prolyl cis-trans isomerase
Displaying items 1-30 of 180 in total

View Taxonomy