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L3_114_000G1_scaffold_396

Search features with annotation key words

Displaying items 1-30 of 60 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_000G1_scaffold_396_1
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2..238
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 3_2_5 RepID=I0PYU9_9BACE
integrase
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EFK62255.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
L3_114_000G1_scaffold_396_2
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1166..1432)
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K6AGU6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KKB56350.1}; TaxID=927665 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii DSM 19448 = WAL 12034.;"
hypothetical protein
L3_114_000G1_scaffold_396_3
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1572..1733)
DNA (162bp) protein (54aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii DSM 18315 RepID=B7BBG2_9PORP
MerR family transcriptional regulator {ECO:0000313|EMBL:KER54985.1}; TaxID=817 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis.;"
hypothetical protein
L3_114_000G1_scaffold_396_4
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1961..2725
DNA (765bp) protein (255aa)
Transcriptional regulator, LuxR family n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0TBS5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KKB56348.1}; TaxID=927665 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii DSM 19448 = WAL 12034.;"
LuxR family transcriptional regulator
L3_114_000G1_scaffold_396_5
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2726..3328)
DNA (603bp) protein (201aa)
Uncharacterized protein n=2 Tax=Parabacteroides merdae RepID=A7AGQ8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN86314.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_114_000G1_scaffold_396_6
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3446..5497
DNA (2052bp) protein (684aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
Superfamily I DNA and RNA helicases (EC:3.6.1.-)
Uncharacterized protein n=1 Tax=Parabacteroides sp. D13 RepID=C7X4Z8_9PORP
L3_114_000G1_scaffold_396_7
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5849..6385
DNA (537bp) protein (179aa)
Transcriptional regulator, AraC family n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0TBS8_9BACE
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EEY84691.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
transcriptional regulator
L3_114_000G1_scaffold_396_8
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6469..6942
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. D13 RepID=C7X500_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EEU52970.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
hypothetical protein
L3_114_000G1_scaffold_396_9
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7182..8474
DNA (1293bp) protein (431aa)
MATE efflux family protein n=2 Tax=Parabacteroides merdae RepID=A7AGP9_9PORP
MATE efflux family protein {ECO:0000313|EMBL:EDN86305.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
cation effux pump BexA
L3_114_000G1_scaffold_396_10
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8649..8900
DNA (252bp) protein (84aa)
Uncharacterized protein n=2 Tax=Parabacteroides merdae RepID=A7AGP8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN86304.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
L3_114_000G1_scaffold_396_11
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9077..10735
DNA (1659bp) protein (553aa)
ATP-binding cassette protein, ChvD family n=2 Tax=Parabacteroides merdae RepID=A7AGP7_9PORP
ATP-binding cassette protein, ChvD family {ECO:0000313|EMBL:EDN86303.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
ABC transporter ATP-binding protein
L3_114_000G1_scaffold_396_12
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10785..11417
DNA (633bp) protein (211aa)
Uncharacterized protein n=2 Tax=Parabacteroides merdae RepID=A7AGP6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN86302.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_114_000G1_scaffold_396_13
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11594..13258
DNA (1665bp) protein (555aa)
Uncharacterized protein n=2 Tax=Parabacteroides merdae RepID=K6A4L9_9PORP
AMP-binding enzyme {ECO:0000313|EMBL:EDN86300.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
long-chain-fatty-acid--CoA ligase
L3_114_000G1_scaffold_396_14
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13306..14718
DNA (1413bp) protein (471aa)
Precorrin-3B C17-methyltransferase n=2 Tax=Parabacteroides merdae RepID=K6C0Z0_9PORP
Precorrin-3B C(17)-methyltransferase {ECO:0000313|EMBL:EDN86299.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
precorrin-3B C(17)-methyltransferase
L3_114_000G1_scaffold_396_15
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14715..15974
DNA (1260bp) protein (420aa)
Precorrin-6y C5,15-methyltransferase (Decarboxylating), CbiE subunit n=2 Tax=Parabacteroides merdae RepID=A7AGP2_9PORP
Precorrin-6y C5,15-methyltransferase (Decarboxylating), CbiE subunit {ECO:0000313|EMBL:EDN86298.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
cobL; precorrin-6Y C5,15-methyltransferase
L3_114_000G1_scaffold_396_16
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15967..17904
DNA (1938bp) protein (646aa)
Precorrin-4 C(11)-methyltransferase n=2 Tax=Parabacteroides merdae RepID=A7AGP1_9PORP
Precorrin-4 C(11)-methyltransferase {ECO:0000313|EMBL:EDN86297.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
putative bifunctional CbiF/CbiG cobalamin biosynthesis protein
L3_114_000G1_scaffold_396_17
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18069..19913
DNA (1845bp) protein (615aa)
Cobalamin biosynthesis protein CbiD n=2 Tax=Parabacteroides merdae RepID=A7AGP0_9PORP
Cobalamin biosynthesis protein CbiD {ECO:0000313|EMBL:EDN86296.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
precorrin-6x reductase
L3_114_000G1_scaffold_396_18
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19914..20588)
DNA (675bp) protein (225aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=A7AGN9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD13727.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L3_114_000G1_scaffold_396_19
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20720..21730)
DNA (1011bp) protein (337aa)
ABC transporter, ATP-binding protein n=2 Tax=Parabacteroides merdae RepID=A7AGN8_9PORP
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDN86294.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
iron(III) ABC transporter ATP-binding protein
L3_114_000G1_scaffold_396_20
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21727..22764)
DNA (1038bp) protein (346aa)
Iron chelate uptake ABC transporter FeCT family permease protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WWL8_9PORP
Iron chelate uptake ABC transporter FeCT family permease protein {ECO:0000313|EMBL:CDD13725.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
iron(III) ABC transporter permease
L3_114_000G1_scaffold_396_21
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22774..23934)
DNA (1161bp) protein (387aa)
Uncharacterized protein n=2 Tax=Parabacteroides merdae RepID=K6BE78_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN14990.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
exported periplasmic protein
L3_114_000G1_scaffold_396_22
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24235..24594)
DNA (360bp) protein (120aa)
Uncharacterized protein n=2 Tax=Parabacteroides merdae RepID=A7AGN5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN86291.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
L3_114_000G1_scaffold_396_23
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24680..25480
DNA (801bp) protein (267aa)
Precorrin-2 C20-methyltransferase n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5YMB8_9PORP
Precorrin-2 C20-methyltransferase {ECO:0000313|EMBL:EKN14992.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
precorrin-2 C(20)-methyltransferase
L3_114_000G1_scaffold_396_24
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25562..27229
DNA (1668bp) protein (556aa)
Formate--tetrahydrofolate ligase {ECO:0000256|HAMAP-Rule:MF_01543}; EC=6.3.4.3 {ECO:0000256|HAMAP-Rule:MF_01543};; Formyltetrahydrofolate synthetase {ECO:0000256|HAMAP-Rule:MF_01543}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
Formate--tetrahydrofolate ligase n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6XBI7_9PORP
formate--tetrahydrofolate ligase
L3_114_000G1_scaffold_396_25
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27316..28134)
DNA (819bp) protein (273aa)
Putative esterase n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WWL5_9PORP
Putative esterase {ECO:0000313|EMBL:CDD13720.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
putative esterase
L3_114_000G1_scaffold_396_26
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28155..28505)
DNA (351bp) protein (117aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=A7AGN0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD13719.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_114_000G1_scaffold_396_27
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28740..28916)
DNA (177bp) protein (59aa)
Uncharacterized protein n=4 Tax=Parabacteroides RepID=A7AGM8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN86284.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
heat-shock protein 101
L3_114_000G1_scaffold_396_28
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29045..29269
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6Y5L6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD13717.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L3_114_000G1_scaffold_396_29
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29266..30609)
DNA (1344bp) protein (448aa)
citrate synthase (EC:2.3.3.5)
Citrate synthase n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K6AF43_9PORP
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
L3_114_000G1_scaffold_396_30
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30645..31904)
DNA (1260bp) protein (420aa)
Isocitrate dehydrogenase [NADP] {ECO:0000256|RuleBase:RU004446}; EC=1.1.1.42 {ECO:0000256|RuleBase:RU004446};; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
Isocitrate dehydrogenase [NADP] n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5ZFA3_9PORP
isocitrate dehydrogenase
Displaying items 1-30 of 60 in total

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