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L3_114_000G1_scaffold_406

Search features with annotation key words

Displaying items 1-30 of 64 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_000G1_scaffold_406_1
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(150..1958)
DNA (1809bp) protein (603aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus CAG:6 RepID=R7NYX1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDF17900.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
hypothetical protein
L3_114_000G1_scaffold_406_2
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2219..3559)
DNA (1341bp) protein (447aa)
Magnesium transporter n=14 Tax=Bacteroides RepID=C3Q5T1_9BACE
magnesium transporter
Magnesium transporter MgtE {ECO:0000256|RuleBase:RU362011}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
L3_114_000G1_scaffold_406_3
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(3591..4433)
DNA (843bp) protein (281aa)
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015019}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015085};; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethyladenosine transferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethylase {ECO:0000256|HAMAP-Rule:MF_00607}; S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
Ribosomal RNA small subunit methyltransferase A n=2 Tax=Bacteroides vulgatus RepID=RSMA_BACV8
ksgA; dimethyladenosine transferase
L3_114_000G1_scaffold_406_4
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4532..5536
DNA (1005bp) protein (335aa)
Uncharacterized protein n=7 Tax=root RepID=C6Z4M9_9BACE
dolichol-P-glucose synthetase
Uncharacterized protein {ECO:0000313|EMBL:EIY81501.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L3_114_000G1_scaffold_406_5
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5533..6993
DNA (1461bp) protein (487aa)
Aminoacyl-histidine dipeptidase n=7 Tax=Bacteroides RepID=A6L1N6_BACV8
aminoacyl-histidine dipeptidase
Xaa-His dipeptidase {ECO:0000313|EMBL:EOS03610.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L3_114_000G1_scaffold_406_6
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7055..7522)
DNA (468bp) protein (156aa)
Cytidine/deoxycytidylate deaminase n=7 Tax=root RepID=A6L1N7_BACV8
cytidine/deoxycytidylate deaminase
Cytidine and deoxycytidylate deaminase zinc-binding region family protein {ECO:0000313|EMBL:KDS56555.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L3_114_000G1_scaffold_406_7
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8435..8650
DNA (216bp) protein (72aa)
Transcriptional regulator, y4mF family n=4 Tax=Bacteroides RepID=C6Z4M4_9BACE
transcriptional regulator
Transcriptional regulator, y4mF family protein {ECO:0000313|EMBL:KDS56552.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L3_114_000G1_scaffold_406_8
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9138..14816
DNA (5679bp) protein (1893aa)
Alpha-2-macroglobulin family protein n=1 Tax=Bacteroides vulgatus PC510 RepID=D4VCD0_BACVU
Alpha-2-macroglobulin family protein {ECO:0000313|EMBL:EFG16443.1}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
hypothetical protein
L3_114_000G1_scaffold_406_9
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14877..15308)
DNA (432bp) protein (144aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=C6Z4M1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EET15885.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
hypothetical protein
L3_114_000G1_scaffold_406_10
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15439..16515
DNA (1077bp) protein (359aa)
Uncharacterized protein n=7 Tax=root RepID=A6L1P2_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KDS56548.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L3_114_000G1_scaffold_406_11
Bacteroides dorei CAG:222, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16518..17615
DNA (1098bp) protein (366aa)
LAO/AO transport system ATPase n=1 Tax=Bacteroides dorei CAG:222 RepID=R6IL68_9BACE
arginine/ornithine transport system ATPase
LAO/AO transport system ATPase {ECO:0000313|EMBL:CDB38777.1}; TaxID=1263042 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides dorei CAG:222.;"
L3_114_000G1_scaffold_406_12
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17704..18684)
DNA (981bp) protein (327aa)
ATP-dependent 6-phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339}; Short=ATP-PFK {ECO:0000256|HAMAP-Rule:MF_00339};; Short=Phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339};; EC=2.7.1.11 {ECO:0000256|HAMAP-Rule:MF_00339};; Phosphohexokinase {ECO:0000256|HAMAP-Rule:MF_00339}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
6-phosphofructokinase n=16 Tax=Bacteroides RepID=A6L1P4_BACV8
6-phosphofructokinase
L3_114_000G1_scaffold_406_13
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18766..19632)
DNA (867bp) protein (289aa)
ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC:1.17.1.2)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570}; EC=1.17.1.2 {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570};; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=7 Tax=Bacteroides RepID=ISPH_BACV8
L3_114_000G1_scaffold_406_14
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19625..20314)
DNA (690bp) protein (230aa)
Cytidylate kinase {ECO:0000255|HAMAP-Rule:MF_00238}; Short=CK {ECO:0000255|HAMAP-Rule:MF_00238};; EC=2.7.4.25 {ECO:0000255|HAMAP-Rule:MF_00238};; Cytidine monophosphate kinase {ECO:0000255|HAMAP-Rule:MF_00238}; Short=CMP kinase {ECO:0000255|HAMAP-Rule:MF_00238};; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
Cytidylate kinase n=3 Tax=Bacteroides vulgatus RepID=KCY_BACV8
cmk; cytidylate kinase
L3_114_000G1_scaffold_406_15
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20500..21183
DNA (684bp) protein (228aa)
Outer membrane protein TonB n=7 Tax=Bacteroides RepID=A6L1P7_BACV8
outer membrane protein TonB
TonB family domain-containing protein {ECO:0000313|EMBL:EIY81484.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L3_114_000G1_scaffold_406_16
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21265..22242
DNA (978bp) protein (326aa)
Isoprenoid biosynthesis like protein n=1 Tax=Bacteroides vulgatus CAG:6 RepID=R7NXV3_9BACE
Isoprenoid biosynthesis like protein {ECO:0000313|EMBL:CDF16957.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
isoprenoid biosynthesis-like protein
L3_114_000G1_scaffold_406_17
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22244..23017
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) RepID=A6L1P9_BACV8
hypothetical protein
Hydrolase, TatD family protein {ECO:0000313|EMBL:KDS29626.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L3_114_000G1_scaffold_406_18
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23360..24133
DNA (774bp) protein (258aa)
Transporter, MotA/TolQ/ExbB proton channel family protein n=7 Tax=Bacteroides RepID=C6Z4L2_9BACE
biopolymer transport protein
Putative biopolymer transport protein {ECO:0000313|EMBL:CDF16955.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L3_114_000G1_scaffold_406_19
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24141..24602
DNA (462bp) protein (154aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A6L1Q1_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOS03596.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L3_114_000G1_scaffold_406_20
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24646..25236
DNA (591bp) protein (197aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A6L1Q2_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDF16953.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L3_114_000G1_scaffold_406_21
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25236..25700
DNA (465bp) protein (155aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A6L1Q3_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIY81478.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L3_114_000G1_scaffold_406_22
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25756..25971
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus CAG:6 RepID=R7NWB9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDF16951.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L3_114_000G1_scaffold_406_23
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25882..26418)
DNA (537bp) protein (179aa)
Uncharacterized protein n=4 Tax=Bacteroides vulgatus RepID=A6L1Q4_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIY81476.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L3_114_000G1_scaffold_406_24
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26453..27838)
DNA (1386bp) protein (462aa)
IgA Peptidase M64 n=6 Tax=Bacteroides RepID=C6Z4K7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EOS03590.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
peptidase M64
L3_114_000G1_scaffold_406_25
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27867..28343
DNA (477bp) protein (159aa)
Transcriptional regulator n=7 Tax=Bacteroides RepID=A6L1Q6_BACV8
transcriptional regulator
Transcriptional regulator AsnC family {ECO:0000313|EMBL:CDF16948.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L3_114_000G1_scaffold_406_26
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28347..28841)
DNA (495bp) protein (165aa)
Dihydrofolate reductase {ECO:0000256|PIRNR:PIRNR000194}; EC=1.5.1.3 {ECO:0000256|PIRNR:PIRNR000194};; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
Dihydrofolate reductase n=5 Tax=Bacteroides RepID=A6L1Q7_BACV8
dihydrofolate reductase
L3_114_000G1_scaffold_406_27
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28925..29719)
DNA (795bp) protein (265aa)
Thymidylate synthase {ECO:0000256|HAMAP-Rule:MF_00008, ECO:0000256|SAAS:SAAS00215270}; Short=TS {ECO:0000256|HAMAP-Rule:MF_00008};; Short=TSase {ECO:0000256|HAMAP-Rule:MF_00008};; EC=2.1.1.45 {ECO:0000256|HAMAP-Rule:MF_00008, ECO:0000256|SAAS:SAAS00215290};; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
thyA; thymidylate synthase (EC:2.1.1.45)
Thymidylate synthase n=4 Tax=Bacteroides RepID=D4VCE8_BACVU
L3_114_000G1_scaffold_406_28
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29801..30130)
DNA (330bp) protein (110aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=A6L1Q9_BACV8
Uncharacterized protein {ECO:0000313|EMBL:KDS56530.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
hypothetical protein
L3_114_000G1_scaffold_406_29
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30114..30662)
DNA (549bp) protein (183aa)
RNA polymerase sigma factor n=14 Tax=Bacteroides RepID=A6L1R0_BACV8
RNA polymerase sigma70 factor
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=357276 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei.;"
L3_114_000G1_scaffold_406_30
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30665..31372)
DNA (708bp) protein (236aa)
Putative uncharacterized protein n=1 Tax=Bacteroides vulgatus PC510 RepID=D4VCF1_BACVU
Putative uncharacterized protein {ECO:0000313|EMBL:EFG16464.1}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
hypothetical protein
Displaying items 1-30 of 64 in total

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