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L3_114_000G1_scaffold_420

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Displaying items 1-30 of 70 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_000G1_scaffold_420_1
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3..869
DNA (867bp) protein (289aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JNL8_CLOBU
Polysaccharide deacetylase {ECO:0000313|EMBL:KJZ86066.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
L3_114_000G1_scaffold_420_2
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

944..1975
DNA (1032bp) protein (344aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z7B0_CLOBU
Glycosyl hydrolase-like protein {ECO:0000313|EMBL:KJZ86087.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
L3_114_000G1_scaffold_420_3
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2143..2694
DNA (552bp) protein (184aa)
Transmembranal protein BioY n=3 Tax=Clostridium butyricum RepID=B1QZ95_CLOBU
Substrate-specific component BioY of biotin ECF transporter {ECO:0000313|EMBL:KJZ86122.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
L3_114_000G1_scaffold_420_4
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2859..3779)
DNA (921bp) protein (307aa)
Ornithine carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174}; Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174};; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
argF; ornithine carbamoyltransferase ArgF (EC:2.1.3.3)
Ornithine carbamoyltransferase n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AU76_CLOBU
L3_114_000G1_scaffold_420_5
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3820..5001)
DNA (1182bp) protein (394aa)
Acetylornithine aminotransferase {ECO:0000256|HAMAP-Rule:MF_01107}; Short=ACOAT {ECO:0000256|HAMAP-Rule:MF_01107};; EC=2.6.1.11 {ECO:0000256|HAMAP-Rule:MF_01107};; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
argD; acetylornithine aminotransferase ArgD (EC:2.6.1.11)
Acetylornithine aminotransferase n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AGV8_CLOBU
L3_114_000G1_scaffold_420_6
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5099..5950)
DNA (852bp) protein (284aa)
Acetylglutamate kinase {ECO:0000256|HAMAP-Rule:MF_00082, ECO:0000256|SAAS:SAAS00245375}; EC=2.7.2.8 {ECO:0000256|HAMAP-Rule:MF_00082, ECO:0000256|SAAS:SAAS00245383};; N-acetyl-L-glutamate 5-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00082}; NAG kinase {ECO:0000256|HAMAP-Rule:MF_00082}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
Acetylglutamate kinase n=4 Tax=Clostridium butyricum RepID=B1QZ98_CLOBU
acetylglutamate kinase
L3_114_000G1_scaffold_420_7
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6055..7278)
DNA (1224bp) protein (408aa)
Arginine biosynthesis bifunctional protein ArgJ n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z7B7_CLOBU
Arginine biosynthesis bifunctional protein ArgJ {ECO:0000256|HAMAP-Rule:MF_01106}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
bifunctional ornithine acetyltransferase/N-acetylglutamate synthase
L3_114_000G1_scaffold_420_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7345..7698)
DNA (354bp) protein (118aa)
TIGR02436 family protein n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6T9H8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ETI88273.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
hypothetical protein
L3_114_000G1_scaffold_420_9
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7813..8847)
DNA (1035bp) protein (345aa)
N-acetyl-gamma-glutamyl-phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00150}; Short=AGPR {ECO:0000256|HAMAP-Rule:MF_00150};; EC=1.2.1.38 {ECO:0000256|HAMAP-Rule:MF_00150};; N-acetyl-glutamate semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00150}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
argC; N-acetyl-gamma-glutamyl-phosphate reductase ArgC (EC:1.2.1.38)
N-acetyl-gamma-glutamyl-phosphate reductase n=2 Tax=Clostridium butyricum RepID=M8KH50_CLOBU
L3_114_000G1_scaffold_420_10
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8969..10360)
DNA (1392bp) protein (464aa)
Argininosuccinate lyase {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:SAAS00211019}; Short=ASAL {ECO:0000256|HAMAP-Rule:MF_00006};; EC=4.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:SAAS00211017};; Arginosuccinase {ECO:0000256|HAMAP-Rule:MF_00006}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
Argininosuccinate lyase n=4 Tax=Clostridium butyricum RepID=B1QZA1_CLOBU
argininosuccinate lyase
L3_114_000G1_scaffold_420_11
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10362..11585)
DNA (1224bp) protein (408aa)
Argininosuccinate synthase {ECO:0000256|SAAS:SAAS00013047}; EC=6.3.4.5 {ECO:0000256|SAAS:SAAS00009947};; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
Argininosuccinate synthase n=2 Tax=Clostridium butyricum RepID=M8JMD4_CLOBU
argininosuccinate synthase
L3_114_000G1_scaffold_420_12
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11917..12297)
DNA (381bp) protein (127aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=B1QZA3_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:EEP52857.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
hypothetical protein
L3_114_000G1_scaffold_420_13
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12294..13010)
DNA (717bp) protein (239aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=B1QZA4_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:EEP52766.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
hypothetical protein
L3_114_000G1_scaffold_420_14
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13274..14929
DNA (1656bp) protein (552aa)
phosphoribulokinase/uridine kinase (EC:2.7.1.48)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=N9Z6V0_CLOBU
ATPase AAA {ECO:0000313|EMBL:KHD16419.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
L3_114_000G1_scaffold_420_15
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15191..16057
DNA (867bp) protein (289aa)
Levansucrase and sucrase synthesis operon antiterminator n=2 Tax=Clostridium butyricum RepID=B1QZA6_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ95440.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
transcriptional antiterminator, BglG
L3_114_000G1_scaffold_420_16
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16250..17692
DNA (1443bp) protein (481aa)
PTS system, N-acetylglucosamine-specific IIBC component n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AGX0_CLOBU
PTS system, N-acetylglucosamine-specific IIBC component {ECO:0000313|EMBL:ENZ35603.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
PTS system N-acetylglucosamine-specific transporter subunit IIBC
L3_114_000G1_scaffold_420_17
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17942..18622
DNA (681bp) protein (227aa)
L-serine dehydratase, beta subunit {ECO:0000313|EMBL:KJZ84840.1}; EC=4.3.1.17 {ECO:0000313|EMBL:KJZ84840.1};; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
sdhB; L-serine dehydratase, beta chain (EC:4.3.1.17)
L-serine dehydratase, iron-sulfur-dependent, beta subunit n=3 Tax=Clostridium butyricum RepID=B1QZA8_CLOBU
L3_114_000G1_scaffold_420_18
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18639..19526
DNA (888bp) protein (296aa)
L-serine dehydratase, iron-sulfur-dependent, alpha subunit {ECO:0000313|EMBL:EEP52854.1}; EC=4.3.1.17 {ECO:0000313|EMBL:EEP52854.1};; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
sdaAA; L-serine dehydratase, alpha chain (EC:4.3.1.17)
L-serine dehydratase, iron-sulfur-dependent, alpha subunit n=3 Tax=Clostridium butyricum RepID=B1QZA9_CLOBU
L3_114_000G1_scaffold_420_19
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19760..20842)
DNA (1083bp) protein (361aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8KH63_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ95492.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
response regulator receiver sensor signal transduction histidine kinase
L3_114_000G1_scaffold_420_20
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21016..23673
DNA (2658bp) protein (886aa)
Hpt sensor hybrid histidine kinase (EC:2.7.3.-)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K8X1_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ96618.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
L3_114_000G1_scaffold_420_21
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23679..24713
DNA (1035bp) protein (345aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JME7_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ96634.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
AraC family two component transcriptional regulator
L3_114_000G1_scaffold_420_22
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24937..26232
DNA (1296bp) protein (432aa)
Urea ABC transporter, periplasmic urea-binding protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JNN7_CLOBU
Urea ABC transporter, substrate binding protein UrtA {ECO:0000313|EMBL:KJZ96622.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
extracellular ligand-binding receptor
L3_114_000G1_scaffold_420_23
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26392..27300
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JD85_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ95450.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
inner-membrane translocator
L3_114_000G1_scaffold_420_24
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27349..28527
DNA (1179bp) protein (393aa)
Urea ABC transporter, permease UrtC n=1 Tax=Clostridium butyricum DKU-01 RepID=M8KH68_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ95444.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
urea ABC transporter permease UrtC
L3_114_000G1_scaffold_420_25

Not on your lists

28551..29327
DNA (777bp) protein (259aa)
Urea ABC transporter, ATP-binding protein UrtD n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K8X7_CLOBU
Urea ABC transporter, ATP-binding protein UrtD {ECO:0000313|EMBL:ETJ18491.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
ABC transporter-like protein
L3_114_000G1_scaffold_420_26

Not on your lists

29329..30015
DNA (687bp) protein (229aa)
Urea ABC transporter, ATP-binding protein UrtE n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JMF1_CLOBU
Urea ABC transporter, ATP-binding protein UrtE {ECO:0000313|EMBL:ETJ18492.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
urea ABC transporter ATP-binding protein UrtE
L3_114_000G1_scaffold_420_27
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30104..30430
DNA (327bp) protein (109aa)
Nitrogen regulatory protein P-II n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JNP1_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ96648.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
nitrogen regulatory protein P-II
L3_114_000G1_scaffold_420_28
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30444..30764
DNA (321bp) protein (107aa)
Nitrogen regulatory protein P-II n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JD90_CLOBU
Nitrogen regulatory protein P-II {ECO:0000313|EMBL:KJZ96647.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
nitrogen regulatory protein P-II
L3_114_000G1_scaffold_420_29
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31043..31312
DNA (270bp) protein (90aa)
Urease subunit gamma {ECO:0000256|HAMAP-Rule:MF_00739, ECO:0000256|RuleBase:RU003850}; EC=3.5.1.5 {ECO:0000256|HAMAP-Rule:MF_00739, ECO:0000256|RuleBase:RU003850};; Urea amidohydrolase subunit gamma {ECO:0000256|HAMAP-Rule:MF_00739}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
Urease subunit gamma n=2 Tax=Clostridium sordellii RepID=T0CEN2_CLOSO
urease subunit gamma
L3_114_000G1_scaffold_420_30
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31350..31709
DNA (360bp) protein (120aa)
Urease subunit beta {ECO:0000256|HAMAP-Rule:MF_01954}; EC=3.5.1.5 {ECO:0000256|HAMAP-Rule:MF_01954};; Urea amidohydrolase subunit beta {ECO:0000256|HAMAP-Rule:MF_01954}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
Urease subunit beta n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=T5LLS3_9FIRM
UreB; urea amidohydrolase
Displaying items 1-30 of 70 in total

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