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L3_114_000G1_scaffold_425

Search features with annotation key words

Displaying items 1-30 of 61 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_000G1_scaffold_425_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..98)
DNA (96bp) protein (32aa)
3-oxoacyl-ACP synthase (EC:2.3.1.41)
3-oxoacyl-[acyl-carrier-protein] synthase 1 {ECO:0000313|EMBL:KEO32264.1}; EC=2.3.1.41 {ECO:0000313|EMBL:KEO32264.1};; TaxID=1444163 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1-250-04_S3_C2.;"
3-oxoacyl-[acyl-carrier-protein] synthase 1 n=1 Tax=Escherichia coli KTE100 RepID=S1H508_ECOLX
L3_114_000G1_scaffold_425_2
Citrobacter werkmanii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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258..2261
DNA (2004bp) protein (668aa)
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC n=1 Tax=Citrobacter youngae ATCC 29220 RepID=D4B764_9ENTR
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC {ECO:0000256|HAMAP-Rule:MF_01102, ECO:0000256|SAAS:SAAS00084295}; Short=tRNA mnm(5)s(2)U biosynthesis bifunctional protein {ECO:0000256|HAMAP-Rule:MF_01102};; TaxID=1114921 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter werkmanii NBRC 105721.;"
mnmC; FAD-dependent oxidoreductase
L3_114_000G1_scaffold_425_3
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2342..2620)
DNA (279bp) protein (93aa)
YfcL family protein n=1 Tax=Shigella flexneri 1235-66 RepID=I6GZQ4_SHIFL
YfcL family protein {ECO:0000313|EMBL:EIQ73996.1}; TaxID=766154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri 1235-66.;"
hypothetical protein
L3_114_000G1_scaffold_425_4
Citrobacter sp. KTE151, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2653..3201)
DNA (549bp) protein (183aa)
Uncharacterized protein n=2 Tax=Citrobacter RepID=R8VCU3_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:EOQ48775.1}; TaxID=1169322 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. KTE151.;"
hypothetical protein
L3_114_000G1_scaffold_425_5
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3201..4010)
DNA (810bp) protein (270aa)
UPF0721 transmembrane protein yfcA n=2 Tax=Citrobacter RepID=C1M766_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:ETX63871.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
hypothetical protein
L3_114_000G1_scaffold_425_6
Citrobacter sp. KTE151, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4010..4834)
DNA (825bp) protein (275aa)
Penicillin-insensitive murein endopeptidase {ECO:0000256|HAMAP-Rule:MF_01623, ECO:0000256|SAAS:SAAS00067071}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01623, ECO:0000256|SAAS:SAAS00067077};; D-alanyl-D-alanine-endopeptidase {ECO:0000256|HAMAP-Rule:MF_01623}; Flags: Precursor;; TaxID=1169322 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. KTE151.;"
Penicillin-insensitive murein endopeptidase n=2 Tax=Citrobacter RepID=R8VBW5_9ENTR
mepA; murein endopeptidase
L3_114_000G1_scaffold_425_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4838..5923)
DNA (1086bp) protein (362aa)
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605};; 5-enolpyruvylshikimate-3-phosphate phospholyase {ECO:0000256|HAMAP-Rule:MF_00300}; TaxID=1444161 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1-176-05_S3_C2.;"
aroC; chorismate synthase (EC:4.2.3.5)
Chorismate synthase n=2 Tax=Escherichia coli RepID=L3JSA2_ECOLX
L3_114_000G1_scaffold_425_8
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5961..6893)
DNA (933bp) protein (311aa)
50S ribosomal protein L3 glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02125}; Short=L3 MTase {ECO:0000256|HAMAP-Rule:MF_02125};; EC=2.1.1.298 {ECO:0000256|HAMAP-Rule:MF_02125};; N5-glutamine methyltransferase PrmB {ECO:0000256|HAMAP-Rule:MF_02125}; TaxID=1439318 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii MGH 56.;"
50S ribosomal protein L3 glutamine methyltransferase n=1 Tax=Citrobacter freundii 4_7_47CFAA RepID=G9SM57_CITFR
SAM-dependent methyltransferase
L3_114_000G1_scaffold_425_9
Citrobacter sp. CIP 55.13, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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7060..7611
DNA (552bp) protein (184aa)
UPF0115 protein CSAG_02175 n=4 Tax=Citrobacter RepID=C1M770_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:CEJ64533.1}; TaxID=1563222 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. CIP 55.13.;"
hypothetical protein
L3_114_000G1_scaffold_425_10
Citrobacter youngae, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7719..8204)
DNA (486bp) protein (162aa)
Phosphohistidine phosphatase SixA {ECO:0000313|EMBL:EFE09986.1}; EC=3.1.3.- {ECO:0000313|EMBL:EFE09986.1};; TaxID=500640 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter youngae ATCC 29220.;"
Phosphohistidine phosphatase SixA n=1 Tax=Citrobacter youngae ATCC 29220 RepID=D4B756_9ENTR
phosphohistidine phosphatase
L3_114_000G1_scaffold_425_11
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8412..10559)
DNA (2148bp) protein (716aa)
fadJ; multifunctional fatty acid oxidation complex subunit alpha (EC:1.1.1.35 4.2.1.17 5.1.2.3)
Fatty acid oxidation complex subunit alpha n=1 Tax=Citrobacter sp. KTE32 RepID=R8VBW9_9ENTR
Fatty acid oxidation complex subunit alpha {ECO:0000256|HAMAP-Rule:MF_01617, ECO:0000256|SAAS:SAAS00051619}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus.;"
L3_114_000G1_scaffold_425_12
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10559..11869)
DNA (1311bp) protein (437aa)
3-ketoacyl-CoA thiolase {ECO:0000256|HAMAP-Rule:MF_01618, ECO:0000256|SAAS:SAAS00022530}; EC=2.3.1.16 {ECO:0000256|HAMAP-Rule:MF_01618, ECO:0000256|SAAS:SAAS00022453};; ACSs {ECO:0000256|HAMAP-Rule:MF_01618}; Acetyl-CoA acyltransferase {ECO:0000256|HAMAP-Rule:MF_01618}; Acyl-CoA ligase {ECO:0000256|HAMAP-Rule:MF_01618}; Beta-ketothiolase {ECO:0000256|HAMAP-Rule:MF_01618}; Fatty acid oxidation complex subunit beta {ECO:0000256|HAMAP-Rule:MF_01618}; TaxID=1439318 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii MGH 56.;"
fadI; 3-ketoacyl-CoA thiolase (EC:2.3.1.16)
3-ketoacyl-CoA thiolase n=1 Tax=Citrobacter sp. 30_2 RepID=C1M773_9ENTR
L3_114_000G1_scaffold_425_13
Salmonella enterica, Salmonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(12046..12330)
DNA (285bp) protein (95aa)
UPF0381 protein yfcZ n=414 Tax=Salmonella choleraesuis RepID=E8NR16_SALET
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJB04940.1}; TaxID=796730 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella.;" source="Salmonella enterica subsp. enterica serovar Newport str. CVM 22425.;"
L3_114_000G1_scaffold_425_14
Citrobacter sp. KTE151, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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12702..14033
DNA (1332bp) protein (444aa)
Long-chain fatty acid transporter n=1 Tax=Citrobacter sp. KTE151 RepID=R8WV52_9ENTR
Long-chain fatty acid transporter {ECO:0000313|EMBL:EOQ48785.1}; TaxID=1169322 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. KTE151.;"
fadL; long-chain fatty acid transport protein
L3_114_000G1_scaffold_425_15
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(14094..14849)
DNA (756bp) protein (252aa)
VacJ-like protein n=1 Tax=Citrobacter youngae ATCC 29220 RepID=D4B750_9ENTR
ABC transporter permease
ABC transporter permease {ECO:0000313|EMBL:AHY14342.1}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
L3_114_000G1_scaffold_425_16
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15138..16079
DNA (942bp) protein (314aa)
Uncharacterized protein n=1 Tax=Citrobacter youngae ATCC 29220 RepID=D4B749_9ENTR
membrane protein
Membrane protein {ECO:0000313|EMBL:AHY14343.1}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
L3_114_000G1_scaffold_425_17
Salmonella enterica, Salmonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16415..17692
DNA (1278bp) protein (426aa)
Phage integrase n=1 Tax=Citrobacter freundii GTC 09629 RepID=R1H9S5_CITFR
Integrase {ECO:0000313|EMBL:CRF73414.1}; Phage integrase family site-specific recombinase {ECO:0000313|EMBL:CES94293.1}; TaxID=90370 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella.;" source="Salmonella typhi.;"
int; phage integrase
L3_114_000G1_scaffold_425_18
Escherichia hermannii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17789..18733
DNA (945bp) protein (315aa)
Uncharacterized protein n=1 Tax=Salmonella enterica subsp. enterica serovar Senftenberg str. ATCC 8400 RepID=V1L646_SALSE
Putative uncharacterized protein {ECO:0000313|EMBL:GAB52690.1}; TaxID=1115512 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia hermannii NBRC 105704.;"
hypothetical protein
L3_114_000G1_scaffold_425_19
Escherichia fergusonii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18851..19051
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=Citrobacter freundii GTC 09629 RepID=R1FLK7_CITFR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAQ88350.1}; TaxID=585054 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73).;"
L3_114_000G1_scaffold_425_20
unknown

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19070..19177
DNA (108bp) protein (36aa)

This feature has no annotations

L3_114_000G1_scaffold_425_21
Tatumella morbirosei, Tatumella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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19170..21614
DNA (2445bp) protein (815aa)
Phage/plasmid primase, P4 family domain-containing protein n=1 Tax=Escherichia coli KTE81 RepID=L3R7G9_ECOLX
DNA primase {ECO:0000313|EMBL:KGD79698.1}; TaxID=642227 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Tatumella.;" source="Tatumella morbirosei.;"
putative phage primase
L3_114_000G1_scaffold_425_22
unknown

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21913..22089
DNA (177bp) protein (59aa)

This feature has no annotations

L3_114_000G1_scaffold_425_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22058..23065
DNA (1008bp) protein (336aa)
Uncharacterized protein n=4 Tax=Escherichia coli RepID=M8ZCD5_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:ENB17566.1}; TaxID=1116036 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2875150.;"
hypothetical protein
L3_114_000G1_scaffold_425_24
Candidatus Accumulibacter sp. BA-91, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23168..24136)
DNA (969bp) protein (323aa)
ADP-ribose pyrophosphatase n=1 Tax=Pseudomonas sp. GM55 RepID=J3GRZ5_9PSED
NUDIX domain protein {ECO:0000313|EMBL:KFB70475.1}; TaxID=1454002 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-91.;"
hypothetical protein
L3_114_000G1_scaffold_425_25
unknown

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comp(24277..24402)
DNA (126bp) protein (42aa)

This feature has no annotations

L3_114_000G1_scaffold_425_26
Buttiauxella agrestis, Buttiauxella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(24515..25474)
DNA (960bp) protein (320aa)
Uncharacterized protein n=1 Tax=Citrobacter freundii GTC 09629 RepID=R1H9T3_CITFR
Ankyrin repeat protein {ECO:0000313|EMBL:KFC79971.1}; TaxID=1006004 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Buttiauxella.;" source="Buttiauxella agrestis ATCC 33320.;"
hypothetical protein
L3_114_000G1_scaffold_425_27
Buttiauxella agrestis, Buttiauxella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25489..26595)
DNA (1107bp) protein (369aa)
Uncharacterized protein n=1 Tax=Klebsiella pneumoniae UCICRE 8 RepID=V3ETZ4_KLEPN
Uncharacterized protein {ECO:0000313|EMBL:KFC79972.1}; TaxID=1006004 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Buttiauxella.;" source="Buttiauxella agrestis ATCC 33320.;"
nuclease
L3_114_000G1_scaffold_425_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(26606..28357)
DNA (1752bp) protein (584aa)
Uncharacterized protein n=21 Tax=Escherichia coli RepID=L2UM03_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:EQP42941.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
hypothetical protein
L3_114_000G1_scaffold_425_29
Erwinia billingiae, Erwinia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(28357..29790)
DNA (1434bp) protein (478aa)
Type I restriction enzyme EcoEI M protein {ECO:0000313|EMBL:CAX61477.1}; EC=2.1.1.72 {ECO:0000313|EMBL:CAX61477.1};; TaxID=634500 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Erwinia.;" source="Erwinia billingiae (strain Eb661).;"
Type I restriction enzyme EcoEI M protein n=1 Tax=Erwinia billingiae (strain Eb661) RepID=D8MXC0_ERWBE
hsdM; type I restriction enzyme EcoEI M protein
L3_114_000G1_scaffold_425_30
Buttiauxella agrestis, Buttiauxella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29904..32339)
DNA (2436bp) protein (812aa)
Type I restriction-modification system, restriction subunit R {ECO:0000313|EMBL:KFC79975.1}; EC=3.-.-.- {ECO:0000313|EMBL:KFC79975.1};; EC=3.1.21.3 {ECO:0000313|EMBL:KFC79975.1};; TaxID=1006004 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Buttiauxella.;" source="Buttiauxella agrestis ATCC 33320.;"
DEAD/DEAH box helicase n=1 Tax=Serratia sp. S4 RepID=UPI000377E625
hsdR; type I restriction enzyme EcoAI R protein
Displaying items 1-30 of 61 in total

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