ggKbase home page

L3_114_000G1_scaffold_444

Search features with annotation key words

Displaying items 1-30 of 59 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_000G1_scaffold_444_1
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(172..366)
DNA (195bp) protein (65aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=C6Z1L4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EOS04398.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L3_114_000G1_scaffold_444_2
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(479..3052)
DNA (2574bp) protein (858aa)
Uncharacterized protein n=6 Tax=Bacteroides RepID=C6Z1L1_9BACE
outer membrane protein
Putative outer membrane protein {ECO:0000313|EMBL:CDF19153.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L3_114_000G1_scaffold_444_3
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3454..4155)
DNA (702bp) protein (234aa)
Phosphate-specific transport system accessory protein PhoU n=4 Tax=Bacteroides RepID=D4V934_BACVU
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
transcriptional regulator
L3_114_000G1_scaffold_444_4
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4359..5111)
DNA (753bp) protein (251aa)
Phosphate import ATP-binding protein PstB {ECO:0000256|HAMAP-Rule:MF_01702}; EC=3.6.3.27 {ECO:0000256|HAMAP-Rule:MF_01702};; ABC phosphate transporter {ECO:0000256|HAMAP-Rule:MF_01702}; Phosphate-transporting ATPase {ECO:0000256|HAMAP-Rule:MF_01702}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
Phosphate ABC transporter, ATP-binding protein n=5 Tax=Bacteroides RepID=D4V933_BACVU
phosphate ABC transporter ATP-binding protein
L3_114_000G1_scaffold_444_5
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5209..6096)
DNA (888bp) protein (296aa)
Phosphate ABC transporter, permease protein PstA n=7 Tax=Bacteroides RepID=C6Z1K7_9BACE
ABC transporter permease
Phosphate ABC transporter, permease protein PstA {ECO:0000313|EMBL:EET14766.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
L3_114_000G1_scaffold_444_6
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6194..7381)
DNA (1188bp) protein (396aa)
Phosphate ABC transporter, permease protein PstC n=4 Tax=Bacteroides RepID=C6Z1K6_9BACE
Phosphate ABC transporter, permease protein PstC {ECO:0000313|EMBL:KDS55961.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
ABC transporter permease
L3_114_000G1_scaffold_444_7
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7649..8467
DNA (819bp) protein (273aa)
Phosphate binding protein n=2 Tax=Bacteroides vulgatus RepID=D4V929_BACVU
Phosphate binding protein {ECO:0000313|EMBL:EOS04406.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
phosphate ABC transporter substrate-binding protein
L3_114_000G1_scaffold_444_8
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8525..10264
DNA (1740bp) protein (580aa)
glutaminyl-tRNA synthetase (EC:6.1.1.18)
Glutamine--tRNA ligase {ECO:0000256|SAAS:SAAS00023088}; EC=6.1.1.18 {ECO:0000256|SAAS:SAAS00023088};; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
Glutaminyl-tRNA synthetase n=7 Tax=root RepID=A6L780_BACV8
L3_114_000G1_scaffold_444_9
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10275..11792
DNA (1518bp) protein (506aa)
Putative N-acetylglucosamine transferase n=1 Tax=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) RepID=A6L781_BACV8
N-acetylglucosamine transferase
TPR repeat family protein {ECO:0000313|EMBL:KDS30759.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L3_114_000G1_scaffold_444_10
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11800..12426
DNA (627bp) protein (209aa)
SNARE-like domain protein n=7 Tax=Bacteroides RepID=C6Z1K2_9BACE
alkaline phosphatase
SNARE-like domain protein {ECO:0000313|EMBL:EET14761.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
L3_114_000G1_scaffold_444_11
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12495..12998
DNA (504bp) protein (168aa)
Probable thiol peroxidase {ECO:0000256|HAMAP-Rule:MF_00269}; EC=1.11.1.- {ECO:0000256|HAMAP-Rule:MF_00269};; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
Probable thiol peroxidase n=6 Tax=Bacteroides RepID=A6L783_BACV8
thiol peroxidase
L3_114_000G1_scaffold_444_12
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13193..14269)
DNA (1077bp) protein (359aa)
GDP-L-fucose synthase {ECO:0000256|HAMAP-Rule:MF_00956}; EC=1.1.1.271 {ECO:0000256|HAMAP-Rule:MF_00956};; GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase {ECO:0000256|HAMAP-Rule:MF_00956}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
GDP-L-fucose synthase n=1 Tax=Bacteroides vulgatus CL09T03C04 RepID=I8ZPR9_BACVU
GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase
L3_114_000G1_scaffold_444_13
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14269..15351)
DNA (1083bp) protein (361aa)
GDP-mannose 4,6-dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; EC=4.2.1.47 {ECO:0000256|HAMAP-Rule:MF_00955};; GDP-D-mannose dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
GDP-mannose 4,6-dehydratase n=13 Tax=root RepID=B6VUI4_9BACE
GDP-D-mannose dehydratase
L3_114_000G1_scaffold_444_14
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15527..16591)
DNA (1065bp) protein (355aa)
Mannose-1-phosphate guanylyltransferase n=7 Tax=Bacteroides RepID=A6L786_BACV8
mannose-1-phosphate guanylyltransferase
Putative mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase {ECO:0000313|EMBL:EFG17651.1}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
L3_114_000G1_scaffold_444_15
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16651..18108
DNA (1458bp) protein (486aa)
Glycosyltransferase n=4 Tax=Bacteroides RepID=A6L787_BACV8
glycosyltransferase
Glycosyltransferase {ECO:0000313|EMBL:ABR41551.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L3_114_000G1_scaffold_444_16
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18144..19031
DNA (888bp) protein (296aa)
Glucose-1-phosphate thymidylyltransferase {ECO:0000256|RuleBase:RU003706}; EC=2.7.7.24 {ECO:0000256|RuleBase:RU003706};; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
Glucose-1-phosphate thymidylyltransferase n=3 Tax=Bacteroides RepID=C6Z1J6_9BACE
glucose-1-phosphate thymidylyltransferase
L3_114_000G1_scaffold_444_17
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19031..19600
DNA (570bp) protein (190aa)
dTDP-4-dehydrorhamnose 3,5-epimerase n=11 Tax=Bacteroides RepID=A6L789_BACV8
dTDP-4-dehydrorhamnose 3,5-epimerase
dTDP-4-dehydrorhamnose 3,5-epimerase {ECO:0000313|EMBL:ABR41553.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L3_114_000G1_scaffold_444_18
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19778..20917)
DNA (1140bp) protein (380aa)
Uncharacterized protein n=6 Tax=Bacteroides RepID=A6L790_BACV8
capsular polysaccharide biosynthesis protein
Chain length determinant family protein {ECO:0000313|EMBL:KDS31819.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L3_114_000G1_scaffold_444_19
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20925..23417)
DNA (2493bp) protein (831aa)
Polysialic acid transport protein kpsD n=1 Tax=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) RepID=A6L791_BACV8
polysialic acid transport protein kpsD
Polysialic acid transport protein kpsD {ECO:0000313|EMBL:ABR41555.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L3_114_000G1_scaffold_444_20
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23657..24973)
DNA (1317bp) protein (439aa)
xylose isomerase (EC:5.3.1.5)
Xylose isomerase {ECO:0000256|HAMAP-Rule:MF_00455, ECO:0000256|RuleBase:RU000609}; EC=5.3.1.5 {ECO:0000256|HAMAP-Rule:MF_00455, ECO:0000256|RuleBase:RU000609};; TaxID=997877 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei CL03T12C01.;"
Xylose isomerase n=13 Tax=root RepID=XYLA_BACV8
L3_114_000G1_scaffold_444_21
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25064..26557)
DNA (1494bp) protein (498aa)
Xylulose kinase n=4 Tax=Bacteroides RepID=A6L793_BACV8
xylulose kinase
Xylulose kinase {ECO:0000313|EMBL:CDF19134.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L3_114_000G1_scaffold_444_22
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26729..27529)
DNA (801bp) protein (267aa)
Hydrolase, NUDIX family n=6 Tax=Bacteroides RepID=C6Z1J0_9BACE
Hydrolase, NUDIX family {ECO:0000313|EMBL:EET14749.2}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
hypothetical protein
L3_114_000G1_scaffold_444_23
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27819..28184
DNA (366bp) protein (122aa)
Response regulator receiver domain protein n=6 Tax=Bacteroides RepID=C6Z1I9_9BACE
chemotaxis protein CheY
Response regulator {ECO:0000313|EMBL:KDS31814.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L3_114_000G1_scaffold_444_24
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28191..29366
DNA (1176bp) protein (392aa)
Bacterial sugar transferase n=4 Tax=Bacteroides RepID=D4V912_BACVU
glycosyltransferase
Putative glycosyltransferase {ECO:0000313|EMBL:CDF19131.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L3_114_000G1_scaffold_444_25
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29403..30266
DNA (864bp) protein (288aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A6L797_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOS04425.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L3_114_000G1_scaffold_444_26
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30272..32419
DNA (2148bp) protein (716aa)
Putative uncharacterized protein n=1 Tax=Bacteroides vulgatus PC510 RepID=D4V910_BACVU
Putative uncharacterized protein {ECO:0000313|EMBL:EFG17639.1}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
hypothetical protein
L3_114_000G1_scaffold_444_27
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32423..33883
DNA (1461bp) protein (487aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=A6L799_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOS04427.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L3_114_000G1_scaffold_444_28
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33864..34769
DNA (906bp) protein (302aa)
Glycosyltransferase family 2 n=4 Tax=Bacteroides RepID=A6L7A0_BACV8
glycosyl transferase family protein
Glycosyl transferase 2 family protein {ECO:0000313|EMBL:KDS55985.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L3_114_000G1_scaffold_444_29
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34766..35890
DNA (1125bp) protein (375aa)
Glycosyltransferase, group 2 family protein n=3 Tax=Bacteroides RepID=D4V907_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EIY77020.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
glycoside transferase family 2
L3_114_000G1_scaffold_444_30
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35898..37058
DNA (1161bp) protein (387aa)
Glycosyltransferase family 2 n=5 Tax=Bacteroides RepID=A6L7A2_BACV8
glycosyl transferase family protein
Uncharacterized protein {ECO:0000313|EMBL:EOS04430.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
Displaying items 1-30 of 59 in total

View Taxonomy