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L3_114_000G1_scaffold_472

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_000G1_scaffold_472_1
Bacteroides sp. 2_1_16, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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3..170
DNA (168bp) protein (56aa)
Biotin--[acetyl-CoA-carboxylase] ligase {ECO:0000313|EMBL:EEZ26149.1}; EC=6.3.4.15 {ECO:0000313|EMBL:EEZ26149.1};; TaxID=469587 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_16.;"
Biotin-[acetyl-CoA-carboxylase] ligase n=7 Tax=Bacteroides RepID=C6I1E2_9BACE
putative biotin/lipoate A/B protein ligase family protein
L3_114_000G1_scaffold_472_2
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

236..1546
DNA (1311bp) protein (437aa)
Uncharacterized protein n=3 Tax=Bacteroides fragilis RepID=Q5LHK1_BACFN
BF0631 family zinc-dependent metalloproteinase lipoprotein {ECO:0000313|EMBL:EIY99398.1}; TaxID=997883 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL07T12C05.;"
hypothetical protein
L3_114_000G1_scaffold_472_3
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1574..2257)
DNA (684bp) protein (228aa)
Uncharacterized protein n=2 Tax=Bacteroides fragilis RepID=I3HSB6_BACFG
Uncharacterized protein {ECO:0000313|EMBL:EIY99397.1}; TaxID=997883 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL07T12C05.;"
hypothetical protein
L3_114_000G1_scaffold_472_4
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2372..3694)
DNA (1323bp) protein (441aa)
Uncharacterized protein n=2 Tax=Bacteroides fragilis RepID=I3HSB7_BACFG
Uncharacterized protein {ECO:0000313|EMBL:EIY99396.1}; TaxID=997883 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL07T12C05.;"
putative beta-glucanase precursor
L3_114_000G1_scaffold_472_5
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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3894..5207
DNA (1314bp) protein (438aa)
MATE efflux family protein n=3 Tax=Bacteroides fragilis RepID=I3HSB8_BACFG
MATE efflux family protein {ECO:0000313|EMBL:EIY99395.1}; TaxID=997883 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL07T12C05.;"
DNA-damage-inducible protein F
L3_114_000G1_scaffold_472_6
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5256..5966
DNA (711bp) protein (237aa)
Uridylate kinase {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197273}; Short=UK {ECO:0000256|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197270};; Uridine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_01220}; TaxID=1339289 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3986 N(B)19.;"
Uridylate kinase n=14 Tax=Bacteroides RepID=PYRH_BACFN
putative uridylate kinase
L3_114_000G1_scaffold_472_7
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6214..7374)
DNA (1161bp) protein (387aa)
Uncharacterized protein n=3 Tax=Bacteroides fragilis RepID=Q5LHK6_BACFN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIY51238.1}; TaxID=997878 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL03T00C08.;"
L3_114_000G1_scaffold_472_8
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7753..8313
DNA (561bp) protein (187aa)
Ribosome-recycling factor n=17 Tax=Bacteroides RepID=RRF_BACFN
frr; putative ribosome recycling factor
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=1073387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis HMW 615.;"
L3_114_000G1_scaffold_472_9
Bacteroides fragilis CAG:47, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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8410..9342
DNA (933bp) protein (311aa)
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=1263046 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides fragilis CAG:47.;"
Putative ribosome biogenesis GTPase RsgA n=2 Tax=Bacteroides RepID=D1JRS5_9BACE
putative ATP/GTP binding protein
L3_114_000G1_scaffold_472_10
Bacteroides sp. 2_1_16, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10481..11200
DNA (720bp) protein (240aa)
CAAX amino terminal protease family protein n=4 Tax=Bacteroides RepID=D1JRS2_9BACE
CAAX amino terminal protease family protein {ECO:0000313|EMBL:EEZ26136.1}; TaxID=469587 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_16.;"
hypothetical protein
L3_114_000G1_scaffold_472_11
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11569..12651
DNA (1083bp) protein (361aa)
Efflux transporter, RND family, MFP subunit n=14 Tax=Bacteroides RepID=C6I1G5_9BACE
putative HlyD-family efflux transporter component
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:EYE56718.1}; TaxID=1339318 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S6L5.;"
L3_114_000G1_scaffold_472_12
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12666..15701
DNA (3036bp) protein (1012aa)
Multidrug efflux membrane fusion protein n=11 Tax=Bacteroides RepID=Q64YJ6_BACFR
putative AcrB/AcrD/AcrF family efflux transporter
Hydrophobe/amphiphile efflux-1 (HAE1) family RND transporter {ECO:0000313|EMBL:EIZ01695.1}; TaxID=997881 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL05T12C13.;"
L3_114_000G1_scaffold_472_13
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15698..17023
DNA (1326bp) protein (442aa)
Uncharacterized protein n=10 Tax=Bacteroides RepID=C6I1G7_9BACE
tolC; putative outer membrane protein
Outer membrane efflux family protein {ECO:0000313|EMBL:EYB11165.1}; TaxID=1339310 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3783N1-6.;"
L3_114_000G1_scaffold_472_14
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17551..19218
DNA (1668bp) protein (556aa)
Cationic amino acid transporter n=9 Tax=Bacteroides RepID=Q64YJ9_BACFR
Amino acid permease family protein {ECO:0000313|EMBL:EYE56715.1}; TaxID=1339318 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S6L5.;"
cationic amino acid transporter
L3_114_000G1_scaffold_472_15
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19311..21467)
DNA (2157bp) protein (719aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=C6I1H0_9BACE
Alpha-N-acetylglucosaminidase (NAGLU) C-terminal domain protein {ECO:0000313|EMBL:EXZ06971.1}; TaxID=1339276 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. DS-208.;"
putative alpha-N-acetylglucosaminidase
L3_114_000G1_scaffold_472_16
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21492..22637)
DNA (1146bp) protein (382aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=C6I1H1_9BACE
putative transmembrane acyl-transferase protein
Acyltransferase family protein {ECO:0000313|EMBL:EXY71636.1}; TaxID=1339287 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3986 T(B)9.;"
L3_114_000G1_scaffold_472_17
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22770..24416)
DNA (1647bp) protein (549aa)
Fumarate hydratase class I, anaerobic n=8 Tax=Bacteroides RepID=F7LKP7_9BACE
Fumarate hydratase class I, anaerobic {ECO:0000313|EMBL:EIY51229.1}; TaxID=997878 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL03T00C08.;"
fumB; putative fumarate hydratase class I, anaerobic
L3_114_000G1_scaffold_472_18
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24840..27353)
DNA (2514bp) protein (838aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 2_1_56FAA RepID=F7LKP5_9BACE
Peptidase M1 family protein {ECO:0000313|EMBL:EXZ84668.1}; TaxID=1339273 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. B1 (UDC16-1).;"
pepN; putative aminopeptidase
L3_114_000G1_scaffold_472_19
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27383..29374)
DNA (1992bp) protein (664aa)
Uncharacterized protein n=9 Tax=Bacteroides RepID=Q5LHM9_BACFN
Uncharacterized protein {ECO:0000313|EMBL:EYE47312.1}; TaxID=1339329 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S23L17.;"
hypothetical protein
L3_114_000G1_scaffold_472_20
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29399..30652)
DNA (1254bp) protein (418aa)
GTPase HflX n=1 Tax=Bacteroides sp. 2_1_56FAA RepID=F7LKP3_9BACE
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=1339329 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S23L17.;"
putative GTP-binding protein
L3_114_000G1_scaffold_472_21
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30769..32163)
DNA (1395bp) protein (465aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=C6I1H7_9BACE
putative lipoprotein
Starch-binding associating with outer membrane family protein {ECO:0000313|EMBL:EXZ46049.1}; TaxID=1339280 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 2-F-2 #4.;"
L3_114_000G1_scaffold_472_22
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32198..35122)
DNA (2925bp) protein (975aa)
SusC/RagA family TonB-linked outer membrane protein n=2 Tax=Bacteroides fragilis RepID=K1G1U7_BACFG
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:EKA87295.1}; TaxID=1073387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis HMW 615.;"
putative TonB dependent outer membrane protein
L3_114_000G1_scaffold_472_23
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35664..37163)
DNA (1500bp) protein (500aa)
SusD family protein n=7 Tax=Bacteroides RepID=D1JRQ7_9BACE
hypothetical protein
Putative outer membrane protein probably involved in nutrient binding {ECO:0000313|EMBL:BAD47417.1}; TaxID=295405 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain YCH46).;"
L3_114_000G1_scaffold_472_24
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(37196..40015)
DNA (2820bp) protein (940aa)
SusC/RagA family TonB-linked outer membrane protein n=1 Tax=Bacteroides fragilis HMW 615 RepID=K1GCV9_BACFG
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:EKA87297.1}; TaxID=1073387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis HMW 615.;"
hypothetical protein
L3_114_000G1_scaffold_472_25
Bacteroides fragilis CAG:47, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

40221..40388
DNA (168bp) protein (56aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=K1G762_BACFG
Uncharacterized protein {ECO:0000313|EMBL:CDD39388.1}; TaxID=1263046 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides fragilis CAG:47.;"
L3_114_000G1_scaffold_472_26
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(40511..42013)
DNA (1503bp) protein (501aa)
Putative outer membrane receptor protein n=1 Tax=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) RepID=Q5LHN7_BACFN
putative outer membrane receptor protein
Putative outer membrane protein, probably involved in nutrient binding protein {ECO:0000313|EMBL:EXZ95991.1}; TaxID=1339269 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. Korea 419.;"
L3_114_000G1_scaffold_472_27
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(42035..44878)
DNA (2844bp) protein (948aa)
Putative surface membrane protein (Fragment) n=1 Tax=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) RepID=Q5LHN6_BACFN
Putative surface membrane protein {ECO:0000313|EMBL:CAH06344.1}; Flags: Fragment;; TaxID=272559 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain ATCC 25285 / DSM 2151 / JCM 11019 / NCTC; 9343).;"
putative surface membrane protein
L3_114_000G1_scaffold_472_28
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(45490..46671)
DNA (1182bp) protein (394aa)
Tyrosine type site-specific recombinase n=9 Tax=Bacteroides RepID=Q64YL1_BACFR
putative integrase/transposase
Phage integrase family protein {ECO:0000313|EMBL:EXZ53507.1}; TaxID=1339299 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3397 T14.;"
L3_114_000G1_scaffold_472_29
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

47124..50306
DNA (3183bp) protein (1061aa)
SusC/RagA family TonB-linked outer membrane protein n=1 Tax=Bacteroides fragilis CL03T12C07 RepID=I9S140_BACFG
Putative outer membrane protein probably involved in nutrient binding {ECO:0000313|EMBL:BAD47414.1}; TaxID=295405 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain YCH46).;"
putative outer membrane protein probably involved in nutrient binding
L3_114_000G1_scaffold_472_30
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

50318..51913
DNA (1596bp) protein (532aa)
Uncharacterized protein n=1 Tax=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) RepID=Q5LHN9_BACFN
Uncharacterized protein {ECO:0000313|EMBL:CAH06341.1}; TaxID=272559 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain ATCC 25285 / DSM 2151 / JCM 11019 / NCTC; 9343).;"
hypothetical protein
Displaying items 1-30 of 44 in total

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