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L3_114_000G1_scaffold_479

Search features with annotation key words

Displaying items 1-30 of 63 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_000G1_scaffold_479_1
unknown

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2..100
DNA (99bp) protein (33aa)

This feature has no annotations

L3_114_000G1_scaffold_479_2
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(157..597)
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Clostridium sp. DL-VIII RepID=G7LZA3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI97676.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
hypothetical protein
L3_114_000G1_scaffold_479_3
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

944..3640
DNA (2697bp) protein (899aa)
AAA superfamily ATPase with N-receiver domain n=2 Tax=Clostridium butyricum RepID=B1R0C0_CLOBU
AAA superfamily ATPase with N-receiver domain {ECO:0000313|EMBL:EEP55756.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
PTS system transcriptional activator
L3_114_000G1_scaffold_479_4
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3760..5829
DNA (2070bp) protein (690aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YSY3_CLOBU
Family 31 glucosidase {ECO:0000313|EMBL:KHD15440.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
alpha-glucosidase, family 31 of glycosyl hydrolase
L3_114_000G1_scaffold_479_5
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5832..6248
DNA (417bp) protein (139aa)
PTS system mannose/fructose/sorbose transporter subunit IIA (EC:2.7.1.69)
PTS system, IIa component n=2 Tax=Clostridium butyricum RepID=B1R0C2_CLOBU
PTS system, IIa component {ECO:0000313|EMBL:EEP55749.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
L3_114_000G1_scaffold_479_6
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6266..7042
DNA (777bp) protein (259aa)
PTS system, IIc component n=2 Tax=Clostridium butyricum RepID=B1R0C3_CLOBU
PTS system, IIc component {ECO:0000313|EMBL:EEP55880.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
PTS system transporter subunit IIC
L3_114_000G1_scaffold_479_7
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7029..7850
DNA (822bp) protein (274aa)
Mannose permease iid component n=2 Tax=Clostridium butyricum RepID=B1R0C4_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ30683.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
PTS trehalose transporter subunit IIBC
L3_114_000G1_scaffold_479_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7864..8340
DNA (477bp) protein (159aa)
PTS system, mannose-specific IIAB component (EC:2.7.1.-)
PTS system, mannose/fructose/sorbose family, IIB component n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AEZ8_CLOBU
PTS system, mannose/fructose/sorbose family, IIB component {ECO:0000313|EMBL:ENZ30682.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
L3_114_000G1_scaffold_479_9
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8529..9023
DNA (495bp) protein (165aa)
Fructose-specific phosphotransferase enzyme iib component n=3 Tax=Clostridium butyricum RepID=B1R0C6_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ30681.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
PTS system sorbose subIIB component family protein
L3_114_000G1_scaffold_479_10
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9134..10345)
DNA (1212bp) protein (404aa)
Xylose repressor protein n=1 Tax=Clostridium butyricum E4 str. BoNT E BL5262 RepID=C4IH86_CLOBU
Xylose repressor protein {ECO:0000313|EMBL:EEP53989.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
xylR; ROK family protein
L3_114_000G1_scaffold_479_11
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10503..11783
DNA (1281bp) protein (427aa)
PTS system, cellobiose-specific IIC component n=1 Tax=Clostridium butyricum E4 str. BoNT E BL5262 RepID=C4IH85_CLOBU
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
putative PTS system, cellobiose-specific IIC component
L3_114_000G1_scaffold_479_12
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11796..13691
DNA (1896bp) protein (632aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=B1QY05_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:EEP52982.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
hypothetical protein
L3_114_000G1_scaffold_479_13
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13754..14638
DNA (885bp) protein (295aa)
Putative sugar ABC transporter permease n=2 Tax=Clostridium butyricum RepID=B1QY04_CLOBU
Putative sugar ABC transporter permease {ECO:0000313|EMBL:EEP53942.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
binding-protein-dependent transport system inner membrane protein
L3_114_000G1_scaffold_479_14
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14643..15449
DNA (807bp) protein (269aa)
Sugar ABC transporter permease n=2 Tax=Clostridium butyricum RepID=B1QY03_CLOBU
Sugar ABC transporter permease {ECO:0000313|EMBL:EEP53164.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
sugar permease
L3_114_000G1_scaffold_479_15
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15453..16898
DNA (1446bp) protein (482aa)
Putative bacterial extracellular solute-binding protein n=2 Tax=Clostridium butyricum RepID=B1QY02_CLOBU
Putative bacterial extracellular solute-binding protein {ECO:0000313|EMBL:EEP54894.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
extracellular solute-binding protein
L3_114_000G1_scaffold_479_16
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17073..17486
DNA (414bp) protein (138aa)
Acetyltransferase, gnat family n=2 Tax=Clostridium butyricum RepID=B1QY01_CLOBU
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EEP53999.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
hypothetical protein
L3_114_000G1_scaffold_479_17
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17899..18981
DNA (1083bp) protein (361aa)
Phosphoserine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160}; EC=2.6.1.52 {ECO:0000256|HAMAP-Rule:MF_00160};; Phosphohydroxythreonine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
Phosphoserine aminotransferase n=2 Tax=Clostridium butyricum RepID=B1QY78_CLOBU
MFS transporter
L3_114_000G1_scaffold_479_18
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19456..20781
DNA (1326bp) protein (442aa)
glvA-1; maltose-6'-phosphate glucosidase (EC:3.2.1.122)
Maltose-6'-phosphate glucosidase n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9BVI9_9CLOT
Maltose-6'-phosphate glucosidase {ECO:0000313|EMBL:EOR21047.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
L3_114_000G1_scaffold_479_19
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21084..22610
DNA (1527bp) protein (509aa)
PTS system maltose and glucose-specific transporter subunit IIC n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9BVH1_9CLOT
PTS system maltose and glucose-specific transporter subunit IIC {ECO:0000313|EMBL:EOR21048.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
PTS system maltose/glucose-specfic transporter subunit IIBC
L3_114_000G1_scaffold_479_20
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22648..23421)
DNA (774bp) protein (258aa)
Sialic acid utilization regulator, RpiR family protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9BV72_9CLOT
Sialic acid utilization regulator, RpiR family protein {ECO:0000313|EMBL:EOR21049.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
RpiR family transcriptional regulator
L3_114_000G1_scaffold_479_21
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23446..24219)
DNA (774bp) protein (258aa)
Transcriptional regulator, RpiR family n=3 Tax=Clostridium botulinum RepID=C3KZ91_CLOB6
RpiR family transcriptional regulator
SIS domain protein {ECO:0000313|EMBL:AJE12471.1}; TaxID=1408283 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum CDC_1436.;"
L3_114_000G1_scaffold_479_22
Youngiibacter fragilis, Youngiibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24299..25225
DNA (927bp) protein (309aa)
Transporter n=1 Tax=Youngiibacter fragilis 232.1 RepID=V7I4W3_9CLOT
Transporter {ECO:0000313|EMBL:ETA80224.1}; TaxID=994573 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Youngiibacter.;" source="Youngiibacter fragilis 232.1.;"
putative auxin efflux carrier
L3_114_000G1_scaffold_479_23
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25355..25837
DNA (483bp) protein (161aa)
PTS system, glucose family, EIIA component n=2 Tax=Clostridium botulinum RepID=C3KZ92_CLOB6
PTS system glucose family Etransporter subunit IIA
PTS system, glucose family, EIIA component {ECO:0000313|EMBL:ACO86376.1}; TaxID=536232 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Kyoto / Type A2).;"
L3_114_000G1_scaffold_479_24
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26060..26632
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HH96_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH99737.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
L3_114_000G1_scaffold_479_25
Tepidanaerobacter acetatoxydans, Tepidanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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27076..27270
DNA (195bp) protein (65aa)
Helix-turn-helix domain protein n=1 Tax=Tepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1) RepID=F4LT82_TEPAE
Helix-turn-helix domain protein
Helix-turn-helix domain protein {ECO:0000313|EMBL:CCP27412.1}; TaxID=1209989 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Tepidanaerobacter.;" source="Tepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1).;"
L3_114_000G1_scaffold_479_26

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27321..28154
DNA (834bp) protein (278aa)
Putative phage replisome organizer n=3 Tax=Clostridium botulinum RepID=C3KWT5_CLOB6
Replisome organizer {ECO:0000313|EMBL:AJA42836.1}; TaxID=1567011 species="Viruses; unclassified phages.;" source="Clostridium phage phiCT19406C.;"
putative phage replisome organizer
L3_114_000G1_scaffold_479_27
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28167..29456
DNA (1290bp) protein (430aa)
dnaC1; replicative DNA helicase DnaC (EC:3.6.4.12)
Replicative DNA helicase DnaC {ECO:0000313|EMBL:AGF59457.1}; EC=3.6.4.12 {ECO:0000313|EMBL:AGF59457.1};; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
Replicative DNA helicase DnaC n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1N7V8_9CLOT
L3_114_000G1_scaffold_479_28
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29536..30126)
DNA (591bp) protein (197aa)
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Clostridium botulinum (strain Eklund 17B / Type B) RepID=B2TKL2_CLOBB
sigma-70 family RNA polymerase sigma factor
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:ACD23338.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklund 17B / Type B).;"
L3_114_000G1_scaffold_479_29
Fusobacterium ulcerans, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

30354..32339
DNA (1986bp) protein (662aa)
Uncharacterized protein n=1 Tax=Fusobacterium ulcerans 12-1B RepID=H1PVY7_9FUSO
Uncharacterized protein {ECO:0000313|EMBL:EHO79841.1}; TaxID=457404 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium ulcerans 12-1B.;"
hypothetical protein
L3_114_000G1_scaffold_479_30
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32503..33852
DNA (1350bp) protein (450aa)
MATE efflux family protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D583_9CLOT
MATE efflux family protein {ECO:0000313|EMBL:EEG53538.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
putative efflux protein, MATE family
Displaying items 1-30 of 63 in total

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