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L3_114_000G1_scaffold_514

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Displaying items 1-30 of 61 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_000G1_scaffold_514_1
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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2..445
DNA (444bp) protein (148aa)
Putative chlorophyll synthesis pathway protein BchC n=1 Tax=Erysipelotrichaceae bacterium CAG:64 RepID=R6VU21_9FIRM
Putative chlorophyll synthesis pathway protein BchC {ECO:0000313|EMBL:CDC85817.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
hypothetical protein
L3_114_000G1_scaffold_514_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(587..2020)
DNA (1434bp) protein (478aa)
Aryl-phospho-beta-D-glucosidase BglH {ECO:0000313|EMBL:EQJ52055.1}; EC=3.2.1.86 {ECO:0000313|EMBL:EQJ52055.1};; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
Aryl-phospho-beta-D-glucosidase BglH n=2 Tax=Firmicutes RepID=T4N9H8_CLODI
hypothetical protein
L3_114_000G1_scaffold_514_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2047..3729)
DNA (1683bp) protein (561aa)
PRD domain protein n=1 Tax=Clostridium difficile P28 RepID=T4N8S1_CLODI
PRD domain protein {ECO:0000313|EMBL:EQJ52056.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
transcriptional antiterminator
L3_114_000G1_scaffold_514_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3759..3887)
DNA (129bp) protein (43aa)
PRD domain protein n=1 Tax=Clostridium difficile P28 RepID=T4N8S1_CLODI
PRD domain protein {ECO:0000313|EMBL:EQJ52056.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
L3_114_000G1_scaffold_514_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3908..6775)
DNA (2868bp) protein (956aa)
Adenine deaminase {ECO:0000256|SAAS:SAAS00006067}; EC=3.5.4.2 {ECO:0000256|SAAS:SAAS00006067};; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
Metallopeptidase M24 family protein n=1 Tax=Clostridium difficile P28 RepID=T4N9N9_CLODI
hypothetical protein
L3_114_000G1_scaffold_514_6
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(6828..7070)
DNA (243bp) protein (81aa)
Adenine deaminase {ECO:0000256|SAAS:SAAS00006067}; EC=3.5.4.2 {ECO:0000256|SAAS:SAAS00006067};; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
Adenine deaminase (EC:3.5.4.2)
Adenine deaminase n=1 Tax=Erysipelotrichaceae bacterium 6_1_45 RepID=H1B4J9_9FIRM
L3_114_000G1_scaffold_514_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7010..8368)
DNA (1359bp) protein (453aa)
PTS system, lactose/cellobiose IIC component family protein n=1 Tax=Clostridium difficile P28 RepID=T4N9W4_CLODI
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
Putative permease IIC component ywbA
L3_114_000G1_scaffold_514_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8371..8673)
DNA (303bp) protein (101aa)
Phosphotransferase system cellobiose-specific component IIB (EC:2.7.1.69)
PTS system, Lactose/Cellobiose specific IIB subunit n=1 Tax=Clostridium difficile P28 RepID=T4N9I4_CLODI
PTS system, Lactose/Cellobiose specific IIB subunit {ECO:0000313|EMBL:EQJ52060.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
L3_114_000G1_scaffold_514_9
Erysipelotrichaceae bacterium 2_2_44A, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(8680..8991)
DNA (312bp) protein (104aa)
Phosphotransferase system cellobiose-specific component IIA (EC:2.7.1.69)
Uncharacterized protein n=7 Tax=Firmicutes RepID=G1VPM8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX75460.1}; TaxID=457422 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 2_2_44A.;"
L3_114_000G1_scaffold_514_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9113..9271
DNA (159bp) protein (53aa)
Uncharacterized protein n=1 Tax=Clostridium difficile P28 RepID=T4N9P5_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQJ52062.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
L3_114_000G1_scaffold_514_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9229..9876)
DNA (648bp) protein (216aa)
HAD hydrolase, IA, variant 1 family protein n=1 Tax=Clostridium difficile P28 RepID=T4N3U4_CLODI
HAD hydrolase, IA, variant 1 family protein {ECO:0000313|EMBL:EQJ52063.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
hypothetical protein
L3_114_000G1_scaffold_514_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9922..10236)
DNA (315bp) protein (105aa)
Septum formation initiator n=6 Tax=Firmicutes RepID=E4LYR7_9CLOT
Septum formation initiator family protein {ECO:0000313|EMBL:EQJ52064.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
Septum formation initiator
L3_114_000G1_scaffold_514_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10451..10594)
DNA (144bp) protein (48aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=E4LYR8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EQJ52065.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
L3_114_000G1_scaffold_514_14
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10635..11228)
DNA (594bp) protein (198aa)
Sugar isomerase, KpsF/GutQ family n=4 Tax=Firmicutes RepID=E4LYR9_9CLOT
Sugar isomerase, KpsF/GutQ family {ECO:0000313|EMBL:EFR35980.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
phosphosugar isomerase
L3_114_000G1_scaffold_514_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11225..12400)
DNA (1176bp) protein (392aa)
C-S lyase family protein {ECO:0000313|EMBL:EQJ52067.1}; EC=4.4.-.- {ECO:0000313|EMBL:EQJ52067.1};; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
Aminotransferase, class I/II n=5 Tax=Firmicutes RepID=E4LYS0_9CLOT
malY; bifunctional protein repressor/cystathionine beta-lyase
L3_114_000G1_scaffold_514_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12397..13971)
DNA (1575bp) protein (525aa)
PTS system, glucose-like IIB component domain protein {ECO:0000313|EMBL:EQJ52068.1}; EC=2.7.1.69 {ECO:0000313|EMBL:EQJ52068.1};; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
PTS system, maltose and glucose-specific IIBC component n=2 Tax=Firmicutes RepID=H1AXV3_9FIRM
malX; PTS system maltose and glucose-specific transporter subunit IIBC
L3_114_000G1_scaffold_514_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14129..14962)
DNA (834bp) protein (278aa)
Transcription antiterminator LicT n=3 Tax=Firmicutes RepID=E4LYS2_9CLOT
PRD domain protein {ECO:0000313|EMBL:EQJ52069.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
Transcription antiterminator, PTS operonregulator
L3_114_000G1_scaffold_514_18
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

15464..15934
DNA (471bp) protein (157aa)
PTS system, beta-glucoside-specific IIB component / PTS system, beta-glucoside-specific IIC component / PTS system, beta-glucoside-specific IIA component (EC:2.7.1.69)
PTS system, glucose subfamily, IIA component domain protein n=1 Tax=Clostridium difficile P28 RepID=T4N9J2_CLODI
PTS sugar transporter subunit IIA {ECO:0000313|EMBL:KGJ54397.1}; TaxID=1522 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Clostridium innocuum.;"
L3_114_000G1_scaffold_514_19
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(16014..16355)
DNA (342bp) protein (114aa)
Uncharacterized protein n=6 Tax=Firmicutes RepID=H1AXV6_9FIRM
Cell division protein {ECO:0000313|EMBL:KGJ54396.1}; TaxID=1522 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Clostridium innocuum.;"
Septum formation initiator
L3_114_000G1_scaffold_514_20
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16749..17051)
DNA (303bp) protein (101aa)
Sporulation protein YabP n=5 Tax=Firmicutes RepID=E4LYS6_9CLOT
Sporulation protein YabP {ECO:0000313|EMBL:EFR35947.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
yabP; spore protein YabP
L3_114_000G1_scaffold_514_21
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(17141..17431)
DNA (291bp) protein (97aa)
S4 domain protein n=7 Tax=Firmicutes RepID=E4LYS7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY88497.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
RNA-binding protein S4
L3_114_000G1_scaffold_514_22
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(17461..17955)
DNA (495bp) protein (165aa)
Uncharacterized protein n=7 Tax=Firmicutes RepID=G1VPP1_9FIRM
AbrB family transcriptional regulator {ECO:0000313|EMBL:EHO32641.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
spoVT; stage V sporulation protein T
L3_114_000G1_scaffold_514_23
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

18207..18449
DNA (243bp) protein (81aa)
DNA-binding helix-turn-helix protein n=8 Tax=Firmicutes RepID=E2SQX7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ENY88499.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
XRE family transcriptional regulator
L3_114_000G1_scaffold_514_24
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(18527..19702)
DNA (1176bp) protein (392aa)
S-adenosylmethionine synthase {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541}; Short=AdoMet synthase {ECO:0000256|HAMAP-Rule:MF_00086};; EC=2.5.1.6 {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541};; MAT {ECO:0000256|HAMAP-Rule:MF_00086}; Methionine adenosyltransferase {ECO:0000256|HAMAP-Rule:MF_00086}; TaxID=1522 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Clostridium innocuum.;"
S-adenosylmethionine synthase n=4 Tax=Firmicutes RepID=E4LYT0_9CLOT
S-adenosylmethionine synthase
L3_114_000G1_scaffold_514_25
unknown

Not on your lists

19860..20069
DNA (210bp) protein (70aa)

This feature has no annotations

L3_114_000G1_scaffold_514_26
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(19991..20692)
DNA (702bp) protein (234aa)
Putative lipoprotein n=1 Tax=Erysipelotrichaceae bacterium CAG:64 RepID=R6UU99_9FIRM
Putative lipoprotein {ECO:0000313|EMBL:CDC85614.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
L3_114_000G1_scaffold_514_27
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20707..24162)
DNA (3456bp) protein (1152aa)
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
Transcription-repair-coupling factor n=1 Tax=Clostridium difficile P28 RepID=T4N9K3_CLODI
transcription-repair coupling factor
L3_114_000G1_scaffold_514_28
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24173..24733)
DNA (561bp) protein (187aa)
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673};; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
peptidyl-tRNA hydrolase (EC:3.1.1.29)
Peptidyl-tRNA hydrolase n=2 Tax=Firmicutes RepID=H1AXW5_9FIRM
L3_114_000G1_scaffold_514_29
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(24929..25093)
DNA (165bp) protein (55aa)
Uncharacterized protein n=4 Tax=Firmicutes RepID=E4LYT4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC85611.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
L3_114_000G1_scaffold_514_30
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25134..26489)
DNA (1356bp) protein (452aa)
Uncharacterized protein n=1 Tax=Clostridium difficile P28 RepID=T4N9Z4_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQJ52084.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
Displaying items 1-30 of 61 in total

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