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L3_114_000G1_scaffold_526

Search features with annotation key words

Displaying items 1-30 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_000G1_scaffold_526_1
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

135..767
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:43 RepID=R7AI81_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD55254.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
hypothetical protein
L3_114_000G1_scaffold_526_2
Peptoniphilus sp. 1-1, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

932..1213
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FVM7_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDZ75661.1}; TaxID=875453 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus sp. 1-1.;"
L3_114_000G1_scaffold_526_3
Peptoniphilus sp. 1-1, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1230..1691
DNA (462bp) protein (154aa)
DNA-binding helix-turn-helix protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FVM6_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDZ75660.1}; TaxID=875453 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus sp. 1-1.;"
L3_114_000G1_scaffold_526_4
Erysipelotrichaceae bacterium 3_1_53, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(1961..2257)
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Erysipelotrichaceae bacterium 3_1_53 RepID=E2SM77_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFP61365.1}; TaxID=658659 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 3_1_53.;"
Predicted transcriptional regulator
L3_114_000G1_scaffold_526_5
unknown

Not on your lists

2308..2667
DNA (360bp) protein (120aa)

This feature has no annotations

L3_114_000G1_scaffold_526_6
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2981..3403
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Coprococcus comes CAG:19 RepID=R6LCC4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB85158.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
Site-specific recombinase XerD
L3_114_000G1_scaffold_526_7
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3680..6331
DNA (2652bp) protein (884aa)
DNA mismatch repair protein MutS n=2 Tax=Coprococcus RepID=C0BC42_9FIRM
DNA mismatch repair protein MutS {ECO:0000256|HAMAP-Rule:MF_00096, ECO:0000256|SAAS:SAAS00184333}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
DNA mismatch repair protein MutS
L3_114_000G1_scaffold_526_8
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6365..8464
DNA (2100bp) protein (700aa)
DNA mismatch repair protein MutL n=2 Tax=Coprococcus RepID=R6LSN2_9FIRM
DNA mismatch repair protein MutL {ECO:0000256|HAMAP-Rule:MF_00149, ECO:0000256|SAAS:SAAS00058680}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
DNA mismatch repair protein MutL
L3_114_000G1_scaffold_526_9
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8484..9449
DNA (966bp) protein (322aa)
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate:tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; Isopentenyl-diphosphate:tRNA isopentenyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
tRNA isopentenyltransferase (miaA) (EC:2.5.1.75)
tRNA dimethylallyltransferase n=2 Tax=Coprococcus RepID=C0BC45_9FIRM
L3_114_000G1_scaffold_526_10
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9449..10744
DNA (1296bp) protein (432aa)
Aluminum resistance protein n=2 Tax=Coprococcus RepID=C0BC46_9FIRM
Aluminum resistance protein {ECO:0000313|EMBL:CDB85163.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
Cys/Met metabolism pyridoxal-phosphate-dependent enzyme
L3_114_000G1_scaffold_526_11
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10746..11981
DNA (1236bp) protein (412aa)
Flavoprotein family protein n=2 Tax=Coprococcus RepID=R6LNP3_9FIRM
Flavoprotein family protein {ECO:0000313|EMBL:CDB85164.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
conserved hypothetical protein TIGR00275
L3_114_000G1_scaffold_526_12
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11974..13626
DNA (1653bp) protein (551aa)
FAD dependent oxidoreductase n=2 Tax=Coprococcus RepID=C0BC49_9FIRM
FAD dependent oxidoreductase {ECO:0000313|EMBL:CDB85165.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
Uncharacterized FAD-dependent dehydrogenases
L3_114_000G1_scaffold_526_13
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13732..13992
DNA (261bp) protein (87aa)
Uncharacterized protein n=2 Tax=Coprococcus RepID=C0BC50_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG88651.1}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
hypothetical protein
L3_114_000G1_scaffold_526_14
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14086..14769
DNA (684bp) protein (228aa)
Putative DNA repair protein RadC n=2 Tax=Coprococcus RepID=C0BC51_9FIRM
Putative DNA repair protein RadC {ECO:0000313|EMBL:EEG88652.1}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
DNA replication and repair protein RadC
L3_114_000G1_scaffold_526_15
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14791..15813
DNA (1023bp) protein (341aa)
Cell shape determining protein, MreB/Mrl family n=2 Tax=Coprococcus RepID=C0BC52_9FIRM
Cell shape determining protein, MreB/Mrl family {ECO:0000313|EMBL:EEG88653.1}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
Actin-like ATPase involved in cell morphogenesis
L3_114_000G1_scaffold_526_16
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15814..16701
DNA (888bp) protein (296aa)
Cell shape-determining protein MreC n=2 Tax=Coprococcus RepID=C0BC53_9FIRM
Cell shape-determining protein MreC {ECO:0000256|PIRNR:PIRNR038471}; Cell shape protein MreC {ECO:0000256|PIRNR:PIRNR038471}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
rod shape-determining protein MreC
L3_114_000G1_scaffold_526_17
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16704..17231
DNA (528bp) protein (176aa)
Rod shape-determining protein MreD n=2 Tax=Coprococcus RepID=C0BC54_9FIRM
Rod shape-determining protein MreD {ECO:0000313|EMBL:CDB85197.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
rod shape-determining protein MreD
L3_114_000G1_scaffold_526_18
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17224..20133
DNA (2910bp) protein (970aa)
Penicillin-binding protein transpeptidase domain protein n=1 Tax=Coprococcus comes CAG:19 RepID=R6LCF8_9FIRM
Penicillin-binding protein transpeptidase domain protein {ECO:0000313|EMBL:CDB85198.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
pbpA1; penicillin-binding protein PbpA1
L3_114_000G1_scaffold_526_19
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20153..20797
DNA (645bp) protein (215aa)
Probable septum site-determining protein MinC n=2 Tax=Coprococcus RepID=C0BC56_9FIRM
Probable septum site-determining protein MinC {ECO:0000256|HAMAP-Rule:MF_00267}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
Septum formation inhibitor
L3_114_000G1_scaffold_526_20
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20811..21602
DNA (792bp) protein (264aa)
Site-determining protein n=2 Tax=Coprococcus RepID=C0BC57_9FIRM
Site-determining protein {ECO:0000256|PIRNR:PIRNR003092}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
septum site-determining protein MinD
L3_114_000G1_scaffold_526_21
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21614..21844
DNA (231bp) protein (77aa)
Putative cell division topological specificity factor MinE n=1 Tax=Coprococcus comes CAG:19 RepID=R6LSR9_9FIRM
Putative cell division topological specificity factor MinE {ECO:0000313|EMBL:CDB85201.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
Septum formation topological specificity factor MinE.
L3_114_000G1_scaffold_526_22
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21841..22965
DNA (1125bp) protein (375aa)
Putative rod shape-determining protein RodA n=2 Tax=Coprococcus RepID=C0BC58_9FIRM
Putative rod shape-determining protein RodA {ECO:0000313|EMBL:EEG88659.1}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
Bacterial cell division membrane protein
L3_114_000G1_scaffold_526_23
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22980..23375
DNA (396bp) protein (132aa)
Methylglyoxal synthase {ECO:0000256|HAMAP-Rule:MF_00549, ECO:0000256|SAAS:SAAS00089917}; Short=MGS {ECO:0000256|HAMAP-Rule:MF_00549};; EC=4.2.3.3 {ECO:0000256|HAMAP-Rule:MF_00549, ECO:0000256|SAAS:SAAS00089921};; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
methylglyoxal synthase (EC:4.2.3.3)
Methylglyoxal synthase n=2 Tax=Coprococcus RepID=C0BC59_9FIRM
L3_114_000G1_scaffold_526_24
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23359..24345
DNA (987bp) protein (329aa)
Serine-type D-Ala-D-Ala carboxypeptidase n=1 Tax=Coprococcus comes CAG:19 RepID=R6LNS9_9FIRM
Serine-type D-Ala-D-Ala carboxypeptidase {ECO:0000313|EMBL:CDB85204.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
D-alanyl-D-alanine carboxypeptidase
L3_114_000G1_scaffold_526_25
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24468..24674)
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Coprococcus comes CAG:19 RepID=R6LH81_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB85205.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
hypothetical protein
L3_114_000G1_scaffold_526_26
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24754..25698
DNA (945bp) protein (315aa)
Radical SAM protein, TIGR01212 family n=2 Tax=Coprococcus RepID=C0BC63_9FIRM
Radical SAM protein TIGR01212 family {ECO:0000313|EMBL:CDB85206.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
radical SAM protein, TIGR01212 family
L3_114_000G1_scaffold_526_27
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25716..27131
DNA (1416bp) protein (472aa)
Uncharacterized protein n=2 Tax=Coprococcus RepID=C0BC64_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB85207.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
hypothetical protein
L3_114_000G1_scaffold_526_28
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27149..27847
DNA (699bp) protein (233aa)
Pyridoxal phosphate enzyme, YggS family n=2 Tax=Coprococcus RepID=C0BC65_9FIRM
Pyridoxal phosphate enzyme YggS family {ECO:0000313|EMBL:CDB85208.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
pyridoxal phosphate enzyme, YggS family
L3_114_000G1_scaffold_526_29
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27876..28421
DNA (546bp) protein (182aa)
Cell division protein SepF n=2 Tax=Coprococcus RepID=C0BC66_9FIRM
Cell division protein SepF {ECO:0000256|HAMAP-Rule:MF_01197}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
hypothetical protein
L3_114_000G1_scaffold_526_30
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28439..29215
DNA (777bp) protein (259aa)
S4 domain protein n=2 Tax=Coprococcus RepID=C0BC67_9FIRM
S4 domain protein {ECO:0000313|EMBL:CDB85210.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
Uncharacterized conserved protein, contains S4-like domain
Displaying items 1-30 of 57 in total

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