ggKbase home page

L3_114_000G1_scaffold_528

Search features with annotation key words

Displaying items 1-30 of 64 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_000G1_scaffold_528_1
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..366)
DNA (366bp) protein (122aa)
Transcriptional regulator, TetR family n=1 Tax=Actinomyces sp. ICM39 RepID=J3J522_9ACTO
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EWC95303.1}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
TetR family transcriptional regulator
L3_114_000G1_scaffold_528_2
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(401..964)
DNA (564bp) protein (188aa)
Flavin reductase {ECO:0000313|EMBL:EWC95417.1}; EC=1.7.-.- {ECO:0000313|EMBL:EWC95417.1};; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
NAD(P)H dehydrogenase, quinone family (EC:1.6.5.2)
Flavin reductase n=1 Tax=Actinomyces sp. ICM39 RepID=J3EG19_9ACTO
L3_114_000G1_scaffold_528_3
Actinomyces sp. ICM47, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1142..1570)
DNA (429bp) protein (143aa)
Glyoxalase-like domain protein n=1 Tax=Actinomyces sp. ICM47 RepID=J1BCQ6_9ACTO
Glyoxalase-like domain protein {ECO:0000313|EMBL:EJG16018.1}; TaxID=936548 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM47.;"
hypothetical protein
L3_114_000G1_scaffold_528_4
Actinomyces sp. ICM39, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1624..2316)
DNA (693bp) protein (231aa)
Putative membrane protein n=1 Tax=Actinomyces sp. ICM39 RepID=J3EG53_9ACTO
Putative membrane protein {ECO:0000313|EMBL:EJN45939.1}; TaxID=1105029 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM39.;"
hypothetical protein
L3_114_000G1_scaffold_528_5
Actinomyces odontolyticus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2345..2644)
DNA (300bp) protein (100aa)
Addiction module toxin, RelE/StbE family n=1 Tax=Actinomyces odontolyticus F0309 RepID=D4TXI0_9ACTO
Addiction module toxin, RelE/StbE family {ECO:0000313|EMBL:EFF80392.1}; TaxID=649742 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces odontolyticus F0309.;"
addiction module toxin, RelE/StbE family
L3_114_000G1_scaffold_528_6
Actinomyces odontolyticus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2634..2912)
DNA (279bp) protein (93aa)
Addiction module antitoxin, RelB/DinJ family n=1 Tax=Actinomyces odontolyticus F0309 RepID=D4TXH9_9ACTO
Addiction module antitoxin, RelB/DinJ family {ECO:0000313|EMBL:EFF80391.1}; TaxID=649742 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces odontolyticus F0309.;"
RelB/DinJ family addiction module antitoxin
L3_114_000G1_scaffold_528_7
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3064..3573)
DNA (510bp) protein (170aa)
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase {ECO:0000256|PIRNR:PIRNR006181}; EC=4.2.-.- {ECO:0000256|PIRNR:PIRNR006181};; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase n=1 Tax=Actinomyces sp. HPA0247 RepID=S2ZRB5_9ACTO
ybaK/ebsC protein
L3_114_000G1_scaffold_528_8
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3593..3982)
DNA (390bp) protein (130aa)
Uncharacterized protein n=2 Tax=Actinomyces odontolyticus RepID=A7BE00_9ACTO
PF03733 domain protein {ECO:0000313|EMBL:EWC95393.1}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
putative membrane protein
L3_114_000G1_scaffold_528_9
Actinomyces sp. ICM39, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4098..4796
DNA (699bp) protein (233aa)
Pyridoxal phosphate enzyme, YggS family n=1 Tax=Actinomyces sp. ICM39 RepID=J2YQ01_9ACTO
Pyridoxal phosphate enzyme, YggS family {ECO:0000313|EMBL:EJN45882.1}; TaxID=1105029 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM39.;"
hypothetical protein
L3_114_000G1_scaffold_528_10
Actinomyces odontolyticus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4844..5464
DNA (621bp) protein (207aa)
Membrane protein, MarC family n=1 Tax=Actinomyces odontolyticus F0309 RepID=D4TXG8_9ACTO
UPF0056 membrane protein {ECO:0000256|RuleBase:RU362048}; TaxID=649742 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces odontolyticus F0309.;"
Multiple antibiotic transport protein marC
L3_114_000G1_scaffold_528_11
Actinomyces sp. ICM39, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5547..6596)
DNA (1050bp) protein (350aa)
Biotin/lipoate A/B protein ligase family protein {ECO:0000313|EMBL:EJN45885.1}; EC=6.3.-.- {ECO:0000313|EMBL:EJN45885.1};; TaxID=1105029 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM39.;"
lipoate-protein ligase A (EC:2.7.7.63)
Biotin/lipoate A/B protein ligase family protein n=1 Tax=Actinomyces sp. ICM39 RepID=J2ZB55_9ACTO
L3_114_000G1_scaffold_528_12
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6620..8467)
DNA (1848bp) protein (616aa)
Dihydroxy-acid dehydratase {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040}; Short=DAD {ECO:0000256|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040};; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
ilvD; dihydroxy-acid dehydratase (EC:4.2.1.9)
Dihydroxy-acid dehydratase n=1 Tax=Actinomyces sp. HPA0247 RepID=S2ZRC1_9ACTO
L3_114_000G1_scaffold_528_13
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8790..9983
DNA (1194bp) protein (398aa)
Uncharacterized protein n=1 Tax=Actinomyces sp. HPA0247 RepID=S2Z712_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EPD72583.1}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
methionine synthase II (Cobalamin-independent)
L3_114_000G1_scaffold_528_14
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10306..10929
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Actinomyces sp. oral taxon 172 str. F0311 RepID=U1QQA9_9ACTO
Putative lipoprotein {ECO:0000313|EMBL:EWC95377.1}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
L3_114_000G1_scaffold_528_15
Atopobium sp. ICM58, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

10954..11997
DNA (1044bp) protein (348aa)
Uncharacterized protein n=1 Tax=Atopobium sp. ICM58 RepID=J3J7G2_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EJN52199.1}; TaxID=1105030 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM58.;"
hypothetical protein
L3_114_000G1_scaffold_528_16
Actinomyces odontolyticus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11982..12614
DNA (633bp) protein (211aa)
ABC transporter, ATP-binding protein n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BE08_9ACTO
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDN81432.1}; TaxID=411466 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces odontolyticus ATCC 17982.;"
ABC transporter
L3_114_000G1_scaffold_528_17
Atopobium sp. ICM58, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

12614..13687
DNA (1074bp) protein (358aa)
Uncharacterized protein n=1 Tax=Atopobium sp. ICM58 RepID=J3J7G0_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EJN52194.1}; TaxID=1105030 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM58.;"
hypothetical protein
L3_114_000G1_scaffold_528_18
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13721..14413
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Actinomyces sp. HPA0247 RepID=S3A8M9_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EPD72584.1}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
glutamine amidotransferase
L3_114_000G1_scaffold_528_19
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14628..15845)
DNA (1218bp) protein (406aa)
Mannose-6-phosphate isomerase, class I {ECO:0000313|EMBL:EWC95408.1}; EC=5.3.1.8 {ECO:0000313|EMBL:EWC95408.1};; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
Mannose-6-phosphate isomerase, class I n=1 Tax=Actinomyces sp. ICM39 RepID=J2YPZ6_9ACTO
mannose-6-phosphate isomerase
L3_114_000G1_scaffold_528_20
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15926..17689)
DNA (1764bp) protein (588aa)
Thiol reductant ABC exporter, CydC subunit n=1 Tax=Actinomyces sp. ICM39 RepID=J3J4W0_9ACTO
Thiol reductant ABC exporter, CydC subunit {ECO:0000313|EMBL:EWC95319.1}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
ABC transporter transmembrane region, type 1
L3_114_000G1_scaffold_528_21
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17686..19287)
DNA (1602bp) protein (534aa)
ABC transporter, ATP-binding protein n=1 Tax=Actinomyces sp. ICM39 RepID=J3J533_9ACTO
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EWC95265.1}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
ABC transporter
L3_114_000G1_scaffold_528_22
Actinomyces odontolyticus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19407..20468)
DNA (1062bp) protein (354aa)
Uncharacterized protein n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BBE6_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EDN80520.1}; TaxID=411466 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces odontolyticus ATCC 17982.;"
hypothetical protein
L3_114_000G1_scaffold_528_23
Atopobium sp. ICM58, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

20557..21462
DNA (906bp) protein (302aa)
LysR substrate-binding domain protein n=1 Tax=Atopobium sp. ICM58 RepID=J3J7F5_9ACTN
LysR substrate-binding domain protein {ECO:0000313|EMBL:EJN52182.1}; TaxID=1105030 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM58.;"
transcriptional regulator, LysR family
L3_114_000G1_scaffold_528_24
Actinomyces sp. ICM39, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21547..22695)
DNA (1149bp) protein (383aa)
Branched-chain-amino-acid transaminase {ECO:0000313|EMBL:EJN45898.1}; EC=2.6.1.42 {ECO:0000313|EMBL:EJN45898.1};; TaxID=1105029 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM39.;"
ilvE; branched-subunit-amino-acid transaminase (EC:2.6.1.42)
Branched-chain-amino-acid transaminase n=1 Tax=Actinomyces sp. ICM39 RepID=J3J518_9ACTO
L3_114_000G1_scaffold_528_25
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22826..23086)
DNA (261bp) protein (87aa)
Addiction module toxin, Txe/YoeB family n=1 Tax=Actinomyces sp. oral taxon 172 str. F0311 RepID=U1Q8U2_9ACTO
Addiction module toxin, Txe/YoeB family {ECO:0000313|EMBL:EWC95427.1}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
Txe/YoeB family addiction module toxin
L3_114_000G1_scaffold_528_26
Actinomyces sp. oral taxon 172, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23089..23331)
DNA (243bp) protein (81aa)
Prevent-host-death family protein n=2 Tax=Actinomyces RepID=S2ZDZ1_9ACTO
Prevent-host-death family protein {ECO:0000313|EMBL:ERH24236.1}; TaxID=1321775 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. oral taxon 172 str. F0311.;"
prevent-host-death family protein
L3_114_000G1_scaffold_528_27
Actinomyces sp. ICM39, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23423..23920
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Actinomyces sp. ICM39 RepID=J2YQ11_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EJN45897.1}; TaxID=1105029 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM39.;"
L3_114_000G1_scaffold_528_28
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24041..24520)
DNA (480bp) protein (160aa)
S-ribosylhomocysteine lyase {ECO:0000256|HAMAP-Rule:MF_00091, ECO:0000256|SAAS:SAAS00059609}; EC=4.4.1.21 {ECO:0000256|HAMAP-Rule:MF_00091, ECO:0000256|SAAS:SAAS00059628};; AI-2 synthesis protein {ECO:0000256|HAMAP-Rule:MF_00091}; Autoinducer-2 production protein LuxS {ECO:0000256|HAMAP-Rule:MF_00091}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
S-ribosylhomocysteine lyase n=1 Tax=Actinomyces sp. ICM39 RepID=J3J4X2_9ACTO
luxS; LuxS protein
L3_114_000G1_scaffold_528_29
Actinomyces sp. ICM39, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24524..26497)
DNA (1974bp) protein (658aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811};; TaxID=1105029 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM39.;"
DNA primase n=1 Tax=Actinomyces sp. ICM39 RepID=J3J521_9ACTO
dnaG; DNA primase
L3_114_000G1_scaffold_528_30
Actinomyces odontolyticus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26544..27848)
DNA (1305bp) protein (435aa)
Deoxyguanosinetriphosphate triphosphohydrolase-like protein n=1 Tax=Actinomyces odontolyticus F0309 RepID=D4TXF0_9ACTO
Deoxyguanosinetriphosphate triphosphohydrolase-like protein {ECO:0000256|HAMAP-Rule:MF_01212}; TaxID=649742 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces odontolyticus F0309.;"
deoxyguanosinetriphosphate triphosphohydrolase
Displaying items 1-30 of 64 in total

View Taxonomy