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L3_114_000G1_scaffold_549

Search features with annotation key words

Displaying items 1-30 of 61 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_000G1_scaffold_549_1
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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1..108
DNA (108bp) protein (36aa)
Uncharacterized protein n=3 Tax=Firmicutes RepID=H1AXJ6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC85296.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
L3_114_000G1_scaffold_549_2
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

105..521
DNA (417bp) protein (139aa)
Phosphotransferase system, mannose/fructose-specific component IIA (EC:2.7.1.69)
Uncharacterized protein n=3 Tax=Firmicutes RepID=H1AXJ5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC85295.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
L3_114_000G1_scaffold_549_3
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

536..1009
DNA (474bp) protein (158aa)
Uncharacterized protein n=2 Tax=Erysipelotrichaceae RepID=H1AXJ4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC85294.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
PTS system sorbose subfamily transporter subunit IIB
L3_114_000G1_scaffold_549_4
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

1025..1798
DNA (774bp) protein (258aa)
PTS system sorbose-specific iic component n=4 Tax=Firmicutes RepID=E4LVU1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC85293.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
PTS system sorbose-specific transporter subunit IIC
L3_114_000G1_scaffold_549_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1785..2624
DNA (840bp) protein (280aa)
PTS system mannose/fructose/sorbose family IID component n=5 Tax=Firmicutes RepID=E4LVU0_9CLOT
PTS system mannose/fructose/sorbose IID component family protein {ECO:0000313|EMBL:EQJ51910.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
PTS system mannose/fructose/sorbose family transporter subunit IID
L3_114_000G1_scaffold_549_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2683..3345
DNA (663bp) protein (221aa)
Deoxyribose-phosphate aldolase {ECO:0000256|SAAS:SAAS00058202}; EC=4.1.2.4 {ECO:0000256|SAAS:SAAS00058202};; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
Deoxyribose-phosphate aldolase n=4 Tax=Firmicutes RepID=H1AXJ1_9FIRM
hypothetical protein
L3_114_000G1_scaffold_549_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3445..4815
DNA (1371bp) protein (457aa)
MATE efflux family protein n=4 Tax=Firmicutes RepID=E4LVT8_9CLOT
MATE efflux family protein {ECO:0000313|EMBL:EQJ51912.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
MATE efflux family protein
L3_114_000G1_scaffold_549_8
unknown

Not on your lists

comp(5166..5381)
DNA (216bp) protein (72aa)

This feature has no annotations

L3_114_000G1_scaffold_549_9
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(5427..5534)
DNA (108bp) protein (36aa)
Uncharacterized protein n=2 Tax=Erysipelotrichaceae RepID=H1AXI9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC85289.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
L3_114_000G1_scaffold_549_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5531..7048)
DNA (1518bp) protein (506aa)
Diguanylate cyclase (GGDEF) domain-containing protein n=2 Tax=Firmicutes RepID=H1AXI8_9FIRM
Diguanylate cyclase domain protein {ECO:0000313|EMBL:EQJ51913.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
Two-component sensor histidine kinase
L3_114_000G1_scaffold_549_11
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7088..8146)
DNA (1059bp) protein (353aa)
PAS domain S-box protein n=3 Tax=Firmicutes RepID=E4LVT6_9CLOT
PAS domain S-box protein {ECO:0000313|EMBL:EFR36981.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
hypothetical protein
L3_114_000G1_scaffold_549_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8399..9046
DNA (648bp) protein (216aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
Signal peptidase I n=5 Tax=Firmicutes RepID=E4LVT5_9CLOT
signal peptidase I
L3_114_000G1_scaffold_549_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9043..9480
DNA (438bp) protein (146aa)
Uncharacterized protein n=4 Tax=Firmicutes RepID=R6UYS1_9FIRM
Polyketide cyclase / dehydrase and lipid transport family protein {ECO:0000313|EMBL:EQJ51916.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
hypothetical protein
L3_114_000G1_scaffold_549_14
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

9514..9798
DNA (285bp) protein (95aa)
Uncharacterized protein n=7 Tax=Firmicutes RepID=E4LVT3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY88224.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
hypothetical protein
L3_114_000G1_scaffold_549_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10154..11482
DNA (1329bp) protein (443aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=H1AXI3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EQJ51918.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
L3_114_000G1_scaffold_549_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11599..12804
DNA (1206bp) protein (402aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=H1AXI2_9FIRM
O-Antigen ligase family protein {ECO:0000313|EMBL:EQJ51919.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
putative polysaccharide repeat unit polymerase
L3_114_000G1_scaffold_549_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13488..14225
DNA (738bp) protein (246aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=H1AXI1_9FIRM
YdjC-like family protein {ECO:0000313|EMBL:EQJ51920.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
cellobiose-phosphate degrading protein
L3_114_000G1_scaffold_549_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14231..16960
DNA (2730bp) protein (910aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=H1AXI0_9FIRM
AAA domain family protein {ECO:0000313|EMBL:EQJ51921.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
AtoC; ATPase
L3_114_000G1_scaffold_549_19
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

17193..17672
DNA (480bp) protein (160aa)
PTS system mannose/fructose/sorbose transporter subunit IIB (EC:2.7.1.69)
PTS system sorbose subfamily IIB component n=7 Tax=Firmicutes RepID=E4LVS8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY88215.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
L3_114_000G1_scaffold_549_20
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

17686..18465
DNA (780bp) protein (260aa)
PTS system sorbose-specific iic component n=7 Tax=Firmicutes RepID=E4LVS7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY88214.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
PTS system, mannose/fructose/sorbose family, IIC component
L3_114_000G1_scaffold_549_21
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

18458..19258
DNA (801bp) protein (267aa)
PTS system mannose/fructose/sorbose transporter subunit IID (EC:2.7.1.69)
PTS system mannose/fructose/sorbose family IID component n=7 Tax=Firmicutes RepID=E4LVS6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY88213.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
L3_114_000G1_scaffold_549_22
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19275..20501
DNA (1227bp) protein (409aa)
Uncharacterized protein n=5 Tax=Firmicutes RepID=E4LVS5_9CLOT
Neutral/alkaline non-lysosomal ceramidase family protein {ECO:0000313|EMBL:EQJ51925.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
hypothetical protein
L3_114_000G1_scaffold_549_23
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20498..20920
DNA (423bp) protein (141aa)
PTS system fructose IIA component n=4 Tax=Firmicutes RepID=E4LVS4_9CLOT
PTS system fructose IIA component family protein {ECO:0000313|EMBL:EQJ51926.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
phosphotransferase system, mannose/fructose-specific component IIA
L3_114_000G1_scaffold_549_24
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21023..21823
DNA (801bp) protein (267aa)
NIF3 (NGG1p interacting factor 3) n=3 Tax=Firmicutes RepID=E4LVS3_9CLOT
NIF3 (NGG1p interacting factor 3) {ECO:0000313|EMBL:EFR36982.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
L3_114_000G1_scaffold_549_25
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21828..22586
DNA (759bp) protein (253aa)
Uncharacterized protein n=3 Tax=Firmicutes RepID=E4LVS2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFR37045.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
tyrosine phosphatase family protein
L3_114_000G1_scaffold_549_26
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22608..23456
DNA (849bp) protein (283aa)
Uncharacterized protein n=5 Tax=Firmicutes RepID=E4LVS1_9CLOT
NIF3 family protein {ECO:0000313|EMBL:EQJ51929.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
hypothetical protein
L3_114_000G1_scaffold_549_27
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23855..24727)
DNA (873bp) protein (291aa)
Transcriptional regulator, AraC family n=5 Tax=Firmicutes RepID=E4LVS0_9CLOT
Cupin domain protein {ECO:0000313|EMBL:EQJ51930.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
AraC family bacterial regulatory protein
L3_114_000G1_scaffold_549_28
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24909..26492
DNA (1584bp) protein (528aa)
Acetate CoA-transferase YdiF {ECO:0000256|PIRNR:PIRNR000858}; EC=2.8.3.8 {ECO:0000256|PIRNR:PIRNR000858};; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
Acetate CoA-transferase YdiF n=2 Tax=Firmicutes RepID=H1B5N7_9FIRM
acyl CoA:acetate/3-ketoacid CoA transferase
L3_114_000G1_scaffold_549_29
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

26605..27063
DNA (459bp) protein (153aa)
MaoC-like protein n=7 Tax=Firmicutes RepID=E4LVR8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY88205.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
MaoC like domain-containing protein
L3_114_000G1_scaffold_549_30
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

27079..28035
DNA (957bp) protein (319aa)
2-dehydropantoate 2-reductase {ECO:0000256|RuleBase:RU003776}; EC=1.1.1.169 {ECO:0000256|RuleBase:RU003776};; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
2-dehydropantoate 2-reductase (EC:1.1.1.169)
2-dehydropantoate 2-reductase n=4 Tax=Firmicutes RepID=E4LVR7_9CLOT
Displaying items 1-30 of 61 in total

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