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L3_114_000G1_scaffold_554

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Displaying items 1-30 of 51 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_000G1_scaffold_554_1
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3..881)
DNA (879bp) protein (293aa)
Uncharacterized protein n=8 Tax=Lactobacillus gasseri RepID=C4VS63_9LACO
membrane protein
Membrane protein {ECO:0000313|EMBL:AJC08045.1}; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;"
L3_114_000G1_scaffold_554_2
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(977..1534)
DNA (558bp) protein (186aa)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_01401};; Peptide-methionine (S)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401}; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;"
Peptide methionine sulfoxide reductase MsrA n=6 Tax=Lactobacillus gasseri RepID=Q042X5_LACGA
methionine sulfoxide reductase A
L3_114_000G1_scaffold_554_3
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1683..2441)
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Lactobacillus gasseri 224-1 RepID=D1YIM1_9LACO
lysophospholipase L1 related esterase
Putative acyl-CoA thioesterase {ECO:0000313|EMBL:KFL97719.1}; TaxID=575604 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri SV-16A-US.;"
L3_114_000G1_scaffold_554_4
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(2444..2899)
DNA (456bp) protein (152aa)
methionine sulfoxide reductase B (EC:1.8.4.12)
Peptide methionine sulfoxide reductase MsrB {ECO:0000256|HAMAP-Rule:MF_01400}; EC=1.8.4.12 {ECO:0000256|HAMAP-Rule:MF_01400};; Peptide-methionine (R)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01400}; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;"
Methionine-R-sulfoxide reductase n=1 Tax=Lactobacillus gasseri JV-V03 RepID=D7V3T6_9LACO
L3_114_000G1_scaffold_554_5
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

2982..4166
DNA (1185bp) protein (395aa)
Aminotransferase, class I/II n=1 Tax=Lactobacillus gasseri JV-V03 RepID=D7V3T7_9LACO
amino acid aminotransferase
Amino acid aminotransferase {ECO:0000313|EMBL:AJC08050.1}; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;"
L3_114_000G1_scaffold_554_6
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


comp(4342..6195)
DNA (1854bp) protein (618aa)
Aspartyl-tRNA synthase {ECO:0000313|EMBL:AJC08051.1}; EC=6.1.1.12 {ECO:0000313|EMBL:AJC08051.1};; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;"
aspS; aspartyl-tRNA synthase (EC:6.1.1.12)
Aspartate--tRNA ligase n=2 Tax=Lactobacillus gasseri RepID=D7V3T8_9LACO
L3_114_000G1_scaffold_554_7
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


comp(6201..7487)
DNA (1287bp) protein (429aa)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;"
Histidine--tRNA ligase n=1 Tax=Lactobacillus gasseri JV-V03 RepID=D7V3T9_9LACO
histidyl-tRNA synthase
L3_114_000G1_scaffold_554_8
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7768..8205)
DNA (438bp) protein (146aa)
D-aminoacyl-tRNA deacylase {ECO:0000256|HAMAP-Rule:MF_00518}; EC=3.1.1.96 {ECO:0000256|HAMAP-Rule:MF_00518};; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;"
D-tyrosyl-tRNA(Tyr) deacylase n=1 Tax=Lactobacillus gasseri JV-V03 RepID=D7V3U0_9LACO
D-tyrosyl-tRNA(Tyr) deacylase
L3_114_000G1_scaffold_554_9
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(8205..10457)
DNA (2253bp) protein (751aa)
Guanosine polyphosphate pyrophosphohydrolase/synthetase n=1 Tax=Lactobacillus gasseri K7 RepID=S1SL52_9LACO
GTP pyrophosphokinase {ECO:0000313|EMBL:AJC08054.1}; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;"
GTP pyrophosphokinase
L3_114_000G1_scaffold_554_10
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(10475..10855)
DNA (381bp) protein (127aa)
Uncharacterized conserved secreted or membrane protein n=5 Tax=Lactobacillus gasseri RepID=Q043X7_LACGA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJC08055.1}; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;"
L3_114_000G1_scaffold_554_11
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(10886..11833)
DNA (948bp) protein (316aa)
Ribosomal protein L11 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189466}; Short=L11 Mtase {ECO:0000256|HAMAP-Rule:MF_00735};; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189468};; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;"
Ribosomal protein L11 methyltransferase n=1 Tax=Lactobacillus gasseri JV-V03 RepID=D7V3U3_9LACO
ribosomal protein L11 methyltransferase
L3_114_000G1_scaffold_554_12
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

11895..12398
DNA (504bp) protein (168aa)
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase {ECO:0000256|PIRNR:PIRNR006181}; EC=4.2.-.- {ECO:0000256|PIRNR:PIRNR006181};; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;"
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase n=1 Tax=Lactobacillus gasseri K7 RepID=S1RZ17_9LACO
transcriptional regulator
L3_114_000G1_scaffold_554_13
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(12450..14141)
DNA (1692bp) protein (564aa)
Uncharacterized protein n=1 Tax=Lactobacillus gasseri K7 RepID=S1S6U7_9LACO
Cell division protein {ECO:0000313|EMBL:AJC08058.1}; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;"
cell division protein
L3_114_000G1_scaffold_554_14
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(14222..16648)
DNA (2427bp) protein (809aa)
E1-E2 ATPase n=1 Tax=Lactobacillus gasseri JV-V03 RepID=D7V3U6_9LACO
ATPase P
ATPase P {ECO:0000313|EMBL:AJC08059.1}; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;"
L3_114_000G1_scaffold_554_15
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(16663..17679)
DNA (1017bp) protein (339aa)
L-asparaginase, type I n=1 Tax=Lactobacillus gasseri JV-V03 RepID=D7V3U7_9LACO
asparaginase
Asparaginase {ECO:0000313|EMBL:AJC08060.1}; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;"
L3_114_000G1_scaffold_554_16
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(17780..19156)
DNA (1377bp) protein (459aa)
Uncharacterized protein n=6 Tax=Lactobacillus gasseri RepID=C4VQ39_9LACO
membrane protein
Membrane protein {ECO:0000313|EMBL:AJC08061.1}; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;"
L3_114_000G1_scaffold_554_17
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(19276..20202)
DNA (927bp) protein (309aa)
ldh; L-lactate dehydrogenase (EC:1.1.1.27)
L-lactate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00488}; Short=L-LDH {ECO:0000256|HAMAP-Rule:MF_00488};; EC=1.1.1.27 {ECO:0000256|HAMAP-Rule:MF_00488};; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;"
L-lactate dehydrogenase n=1 Tax=Lactobacillus gasseri JV-V03 RepID=D7V3U9_9LACO
L3_114_000G1_scaffold_554_18
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(20283..21656)
DNA (1374bp) protein (458aa)
Fumarate reductase, flavoprotein subunit n=1 Tax=Lactobacillus gasseri K7 RepID=S1S6V2_9LACO
cytochrome C
Cytochrome C {ECO:0000313|EMBL:AJC08063.1}; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;"
L3_114_000G1_scaffold_554_19
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(21671..23077)
DNA (1407bp) protein (469aa)
Fumarate hydratase class II {ECO:0000256|HAMAP-Rule:MF_00743}; Short=Fumarase C {ECO:0000256|HAMAP-Rule:MF_00743};; EC=4.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00743};; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;"
Fumarate hydratase class II n=1 Tax=Lactobacillus gasseri K7 RepID=S1SL63_9LACO
fumarate hydratase
L3_114_000G1_scaffold_554_20
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(23216..23917)
DNA (702bp) protein (234aa)
ABC transporter, permease protein n=1 Tax=Lactobacillus gasseri JV-V03 RepID=D7V3V2_9LACO
ABC-type metal ion transport system, permease component
ABC transporter, permease protein {ECO:0000313|EMBL:EFB62487.1}; TaxID=679196 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 224-1.;"
L3_114_000G1_scaffold_554_21
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(23910..24959)
DNA (1050bp) protein (350aa)
Methionine import ATP-binding protein MetN {ECO:0000256|HAMAP-Rule:MF_01719}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01719};; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;"
ABC transporter, ATP-binding protein n=1 Tax=Lactobacillus gasseri JV-V03 RepID=D7V3V3_9LACO
methionine ABC transporter ATP-binding protein
L3_114_000G1_scaffold_554_22
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(24975..25829)
DNA (855bp) protein (285aa)
Lipoprotein n=1 Tax=Lactobacillus gasseri JV-V03 RepID=D7V3V4_9LACO
ABC transporter substrate-binding protein
Lipoprotein {ECO:0000256|PIRNR:PIRNR002854}; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;"
L3_114_000G1_scaffold_554_23
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

26234..26962
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=Lactobacillus gasseri JV-V03 RepID=D7V3V5_9LACO
DNA-entry nuclease
DNA-entry nuclease {ECO:0000313|EMBL:AJC08068.1}; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;"
L3_114_000G1_scaffold_554_24
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

26962..27813
DNA (852bp) protein (284aa)
DNA-entry nuclease n=1 Tax=Lactobacillus gasseri K7 RepID=S1SL71_9LACO
2-hydroxyacid dehydrogenase
2-hydroxyacid dehydrogenase {ECO:0000313|EMBL:AJC08069.1}; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;"
L3_114_000G1_scaffold_554_25
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

28115..28432
DNA (318bp) protein (106aa)
XRE family transcriptional regulator (Fragment) n=1 Tax=Lactobacillus gasseri K7 RepID=S1RWJ9_9LACO
Putative helix-turn-helix protein {ECO:0000313|EMBL:KFL97437.1}; TaxID=575604 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri SV-16A-US.;"
XRE family transcriptional regulator
L3_114_000G1_scaffold_554_26
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(28495..29475)
DNA (981bp) protein (327aa)
Conjugated bile salt hydrolase n=1 Tax=Lactobacillus gasseri K7 RepID=S1SMI8_9LACO
choloylglycine hydrolase
Choloylglycine hydrolase {ECO:0000313|EMBL:AJC08071.1}; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;"
L3_114_000G1_scaffold_554_27
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(29575..31197)
DNA (1623bp) protein (541aa)
ABC transporter, ATP-binding protein n=1 Tax=Lactobacillus gasseri JV-V03 RepID=D7V3V9_9LACO
Heme ABC transporter ATP-binding protein {ECO:0000313|EMBL:AJC08072.1}; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;"
heme ABC transporter ATP-binding protein
L3_114_000G1_scaffold_554_28
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(31250..31426)
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=Lactobacillus gasseri JV-V03 RepID=D7V3W0_9LACO
membrane protein
Membrane protein {ECO:0000313|EMBL:AJC08073.1}; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;"
L3_114_000G1_scaffold_554_29
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(31646..32932)
DNA (1287bp) protein (429aa)
eno; enolase (EC:4.2.1.11)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000256|HAMAP-Rule:MF_00318}; TaxID=679196 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 224-1.;"
Enolase 1 n=7 Tax=Lactobacillus gasseri RepID=ENO1_LACGA
L3_114_000G1_scaffold_554_30
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(33110..33694)
DNA (585bp) protein (195aa)
PAP2 family protein n=1 Tax=Lactobacillus gasseri JV-V03 RepID=D7V3W2_9LACO
membrane-associated phospholipid phosphatase
Putative membrane-associated phosphatase {ECO:0000313|EMBL:KFL97433.1}; TaxID=575604 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri SV-16A-US.;"
Displaying items 1-30 of 51 in total

View Taxonomy