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L3_114_000G1_scaffold_581

Search features with annotation key words

Displaying items 1-30 of 61 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_000G1_scaffold_581_1
unknown

Not on your lists

1206..1355
DNA (150bp) protein (50aa)

This feature has no annotations

L3_114_000G1_scaffold_581_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1318..3360)
DNA (2043bp) protein (681aa)
FtsX-like permease family protein n=1 Tax=Clostridium difficile P28 RepID=T4PA13_CLODI
FtsX-like permease family protein {ECO:0000313|EMBL:EQJ64211.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
hypothetical protein
L3_114_000G1_scaffold_581_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3350..4117)
DNA (768bp) protein (256aa)
ABC transporter, ATP-binding protein n=3 Tax=Firmicutes RepID=E4LXK0_9CLOT
ABC transporter family protein {ECO:0000313|EMBL:EQJ64210.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
ABC transporter ATP-binding protein
L3_114_000G1_scaffold_581_4
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(4114..4320)
DNA (207bp) protein (69aa)
Uncharacterized protein n=7 Tax=Firmicutes RepID=E4LXJ9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHO24364.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
L3_114_000G1_scaffold_581_5
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4485..5498)
DNA (1014bp) protein (338aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=6 Tax=Firmicutes RepID=E4LXJ8_9CLOT
sensor histidine kinase
L3_114_000G1_scaffold_581_6
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(5488..6162)
DNA (675bp) protein (225aa)
Response regulator receiver domain protein n=7 Tax=Firmicutes RepID=E4LXJ7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC86008.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
response regulator
L3_114_000G1_scaffold_581_7
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(6244..6462)
DNA (219bp) protein (73aa)
Uncharacterized protein n=7 Tax=Firmicutes RepID=E4LXJ6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY89022.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
L3_114_000G1_scaffold_581_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6507..6746)
DNA (240bp) protein (80aa)
Uncharacterized protein n=4 Tax=Firmicutes RepID=E4LXJ5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EQJ64204.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
L3_114_000G1_scaffold_581_9
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(6943..7527)
DNA (585bp) protein (195aa)
Uncharacterized protein n=6 Tax=Firmicutes RepID=G1VWG5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ENY89024.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
phage repressor like transcriptional regulator, XRE family
L3_114_000G1_scaffold_581_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7674..8924
DNA (1251bp) protein (417aa)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
Nucleotidyltransferase/DNA polymerase involved in DNA repair (EC:2.7.7.7)
DNA polymerase IV n=4 Tax=Firmicutes RepID=E4LXJ3_9CLOT
L3_114_000G1_scaffold_581_11
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

8933..9199
DNA (267bp) protein (89aa)
Uncharacterized protein n=7 Tax=Firmicutes RepID=E4LXJ2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY89026.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
hypothetical protein
L3_114_000G1_scaffold_581_12
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

9250..9627
DNA (378bp) protein (126aa)
Uncharacterized protein n=6 Tax=Firmicutes RepID=G1VWG8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ENY89027.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
glyoxalase
L3_114_000G1_scaffold_581_13
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(9726..9902)
DNA (177bp) protein (59aa)
Uncharacterized protein n=7 Tax=Firmicutes RepID=E4LXJ0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY89028.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
L3_114_000G1_scaffold_581_14
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

10080..12011
DNA (1932bp) protein (644aa)
Uncharacterized protein n=6 Tax=Firmicutes RepID=G1VWH0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ENY89029.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
negative regulator of genetic competence ClpC/mecB
L3_114_000G1_scaffold_581_15
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12359..13447)
DNA (1089bp) protein (363aa)
Sugar-binding domain protein n=3 Tax=Firmicutes RepID=E4LXI8_9CLOT
Sugar-binding domain protein {ECO:0000313|EMBL:EFR36500.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
transcriptional regulator, LacI family
L3_114_000G1_scaffold_581_16
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13560..13733
DNA (174bp) protein (58aa)
Uncharacterized protein n=1 Tax=Clostridium sp. HGF2 RepID=E4LXI7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFR36589.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
L3_114_000G1_scaffold_581_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13758..15203
DNA (1446bp) protein (482aa)
FAD dependent oxidoreductase n=2 Tax=Firmicutes RepID=R6UJS9_9FIRM
FAD binding domain protein {ECO:0000313|EMBL:EQJ64196.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
FAD dependent oxidoreductase
L3_114_000G1_scaffold_581_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15200..16462
DNA (1263bp) protein (421aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=R6VUR9_9FIRM
FAD binding domain protein {ECO:0000313|EMBL:EQJ64195.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
Thioredoxin reductase
L3_114_000G1_scaffold_581_19
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16466..16816
DNA (351bp) protein (117aa)
Uncharacterized protein n=5 Tax=Firmicutes RepID=E4LXI4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EQJ64194.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
Uncharacterized protein with conserved CXXC pairs
L3_114_000G1_scaffold_581_20
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17434..18774
DNA (1341bp) protein (447aa)
Magnesium transporter n=2 Tax=Firmicutes RepID=R6UNI8_9FIRM
Magnesium transporter MgtE {ECO:0000256|RuleBase:RU362011}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
mgtE; magnesium transporter
L3_114_000G1_scaffold_581_21
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18820..19572
DNA (753bp) protein (251aa)
Oxidoreductase, short chain dehydrogenase/reductase family protein n=3 Tax=Firmicutes RepID=E4LXI2_9CLOT
Oxidoreductase, short chain dehydrogenase/reductase family protein {ECO:0000313|EMBL:EFR36591.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
Short-chain dehydrogenase/reductase SDR
L3_114_000G1_scaffold_581_22
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19651..20148)
DNA (498bp) protein (166aa)
Large-conductance mechanosensitive channel n=7 Tax=Firmicutes RepID=E4LXI1_9CLOT
Large-conductance mechanosensitive channel {ECO:0000256|HAMAP-Rule:MF_00115, ECO:0000256|SAAS:SAAS00023935}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
mscL; mechanosensitive ion channel MscS
L3_114_000G1_scaffold_581_23
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20194..21453)
DNA (1260bp) protein (420aa)
Uncharacterized protein n=3 Tax=Firmicutes RepID=H1BCZ6_9FIRM
Aminopeptidase P, N-terminal domain protein {ECO:0000313|EMBL:EQJ64190.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
Xaa-Pro aminopeptidase
L3_114_000G1_scaffold_581_24
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

21708..21917
DNA (210bp) protein (70aa)
Uncharacterized protein n=3 Tax=Erysipelotrichaceae RepID=H1B0D6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC85991.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
L3_114_000G1_scaffold_581_25
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21914..22915
DNA (1002bp) protein (334aa)
Uncharacterized protein n=6 Tax=Firmicutes RepID=H1B0D5_9FIRM
Sigma-70, region 4 family protein {ECO:0000313|EMBL:EQJ64189.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
transcriptional regulator, DeoR family
L3_114_000G1_scaffold_581_26
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22900..23358
DNA (459bp) protein (153aa)
Glucitol operon activator protein (GutM) n=4 Tax=Firmicutes RepID=E4LXH8_9CLOT
Glucitol operon activator family protein {ECO:0000313|EMBL:EQJ64188.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
Glucitol operon activator
L3_114_000G1_scaffold_581_27
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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23378..23920
DNA (543bp) protein (181aa)
PTS system, glucitol/sorbitol-specific, IIC component family protein {ECO:0000313|EMBL:EQJ64187.1}; EC=2.7.1.69 {ECO:0000313|EMBL:EQJ64187.1};; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
PTS system, glucitol/sorbitol-specific, IIC component family protein n=1 Tax=Clostridium difficile P28 RepID=T4P974_CLODI
PTS system, glucitol/sorbitol-specific, IIC component
L3_114_000G1_scaffold_581_28
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

23924..24922
DNA (999bp) protein (333aa)
Protein-N(pi)-phosphohistidine--sugar phosphotransferase (EC:2.7.1.69)
PTS system, glucitol/sorbitol-specific, IIBC component n=5 Tax=Firmicutes RepID=E4LXH6_9CLOT
PTS system glucitol/sorbitol-specific IIBC component {ECO:0000313|EMBL:CDC85987.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
L3_114_000G1_scaffold_581_29
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

24934..25299
DNA (366bp) protein (122aa)
Phosphotransferase system sorbitol-specific component IIA (EC:2.7.1.69)
Uncharacterized protein n=3 Tax=Firmicutes RepID=H1B0D1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC85986.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
L3_114_000G1_scaffold_581_30
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25430..26722
DNA (1293bp) protein (431aa)
Uncharacterized protein n=5 Tax=Firmicutes RepID=E4LXH4_9CLOT
SAF domain protein {ECO:0000313|EMBL:EQJ64184.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
Predicted homoserine dehydrogenase
Displaying items 1-30 of 61 in total

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