ggKbase home page

L3_114_000G1_scaffold_594

Search features with annotation key words

Displaying items 1-30 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_000G1_scaffold_594_1
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(2..517)
DNA (516bp) protein (172aa)
Protein RecA n=7 Tax=root RepID=C6Z450_9BACE
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
recA; recombinase A
L3_114_000G1_scaffold_594_2
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(530..976)
DNA (447bp) protein (149aa)
Antioxidant, AhpC/TSA family n=7 Tax=Bacteroides RepID=D4VD62_BACVU
bacterioferritin co-migratory protein
AhpC/TSA family protein {ECO:0000313|EMBL:KDS55614.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L3_114_000G1_scaffold_594_3
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1044..2237)
DNA (1194bp) protein (398aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A6L2X4_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDF19879.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L3_114_000G1_scaffold_594_4
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2333..3586)
DNA (1254bp) protein (418aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus CL09T03C04 RepID=I9A3I1_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EIY81907.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
hypothetical protein
L3_114_000G1_scaffold_594_5
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3711..4502
DNA (792bp) protein (264aa)
Uncharacterized protein n=6 Tax=Bacteroides RepID=A6L2X6_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIY81906.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L3_114_000G1_scaffold_594_6
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4831..6744
DNA (1914bp) protein (638aa)
Chaperone protein DnaK n=1 Tax=Bacteroides vulgatus CAG:6 RepID=R7P6B0_9BACE
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP-Rule:MF_00332}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
dnaK; molecular chaperone DnaK
L3_114_000G1_scaffold_594_7
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6938..7474
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC 10582 / E50 / VPI-5482) RepID=Q89YW5_BACTN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAO79721.1}; TaxID=226186 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC; 10582 / E50 / VPI-5482).;"
L3_114_000G1_scaffold_594_8
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7596..8264
DNA (669bp) protein (223aa)
Site-specific recombinase, phage integrase family n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0TGN9_9BACE
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EEY82293.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
integrase
L3_114_000G1_scaffold_594_9
Bacteroides sp. D22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8462..9961)
DNA (1500bp) protein (500aa)
Divergent AAA domain protein n=1 Tax=Bacteroides sp. D22 RepID=D7J148_9BACE
Divergent AAA domain protein {ECO:0000313|EMBL:EFI14708.1}; TaxID=585544 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D22.;"
hypothetical protein
L3_114_000G1_scaffold_594_10
unknown

Not on your lists

10054..10176
DNA (123bp) protein (41aa)

This feature has no annotations

L3_114_000G1_scaffold_594_11
unknown

Not on your lists

10173..10316
DNA (144bp) protein (48aa)

This feature has no annotations

L3_114_000G1_scaffold_594_12
unknown

Not on your lists

comp(10580..10888)
DNA (309bp) protein (103aa)

This feature has no annotations

L3_114_000G1_scaffold_594_13
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11018..11194
DNA (177bp) protein (59aa)
Uncharacterized protein n=14 Tax=Bacteroides RepID=A6L308_BACV8
heat-shock protein 101
Uncharacterized protein {ECO:0000313|EMBL:CDF18265.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L3_114_000G1_scaffold_594_14
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11257..12141)
DNA (885bp) protein (295aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=A6L309_BACV8
hypothetical protein
Bacterial regulatory helix-turn-helix s, AraC family protein {ECO:0000313|EMBL:KDS55578.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L3_114_000G1_scaffold_594_15
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12397..13482)
DNA (1086bp) protein (362aa)
O-succinylbenzoic acid--CoA ligase family protein n=6 Tax=Bacteroides RepID=C6Z964_9BACE
O-succinylbenzoate--CoA ligase
Uncharacterized protein {ECO:0000313|EMBL:EIY81854.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L3_114_000G1_scaffold_594_16
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13479..14534)
DNA (1056bp) protein (352aa)
O-succinylbenzoate synthase n=5 Tax=Bacteroides RepID=C6Z963_9BACE
muconate cycloisomerase
O-succinylbenzoate synthase {ECO:0000313|EMBL:EIY81853.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L3_114_000G1_scaffold_594_17
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14612..15433)
DNA (822bp) protein (274aa)
dihydroxynaphthoic acid synthetase (EC:4.1.3.36)
1,4-dihydroxy-2-naphthoyl-CoA synthase {ECO:0000256|HAMAP-Rule:MF_01934}; Short=DHNA-CoA synthase {ECO:0000256|HAMAP-Rule:MF_01934};; EC=4.1.3.36 {ECO:0000256|HAMAP-Rule:MF_01934};; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
Naphthoate synthase n=5 Tax=Bacteroides RepID=D4V5I7_BACVU
L3_114_000G1_scaffold_594_18
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15433..17106)
DNA (1674bp) protein (558aa)
2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase {ECO:0000256|HAMAP-Rule:MF_01659, ECO:0000256|SAAS:SAAS00056887}; Short=SEPHCHC synthase {ECO:0000256|HAMAP-Rule:MF_01659};; EC=2.2.1.9 {ECO:0000256|HAMAP-Rule:MF_01659, ECO:0000256|SAAS:SAAS00056850};; Menaquinone biosynthesis protein MenD {ECO:0000256|HAMAP-Rule:MF_01659}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase n=8 Tax=root RepID=MEND_BACV8
2-oxoglutarate decarboxylase
L3_114_000G1_scaffold_594_19
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17133..18275)
DNA (1143bp) protein (381aa)
Isochorismate synthase {ECO:0000313|EMBL:EET17419.1}; EC=5.4.4.2 {ECO:0000313|EMBL:EET17419.1};; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
Isochorismate synthase n=2 Tax=Bacteroides RepID=C6Z960_9BACE
isochorismate synthase EntC
L3_114_000G1_scaffold_594_20
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18272..18679)
DNA (408bp) protein (136aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=C6Z959_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EET17418.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
haloacid dehalogenase
L3_114_000G1_scaffold_594_21
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18868..20730
DNA (1863bp) protein (621aa)
TrkA C-terminal domain protein n=4 Tax=Bacteroides RepID=C6Z957_9BACE
TrkA-C domain protein {ECO:0000313|EMBL:EFG18852.1}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
citrate transporter
L3_114_000G1_scaffold_594_22
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20693..22048)
DNA (1356bp) protein (452aa)
MATE efflux family protein n=4 Tax=root RepID=C6Z956_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EFV67159.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
multidrug transporter MatE
L3_114_000G1_scaffold_594_23
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22285..24786
DNA (2502bp) protein (834aa)
Pyridine nucleotide-disulfide oxidoreductase n=4 Tax=Bacteroides RepID=C6Z955_9BACE
Pyridine nucleotide-disulfide oxidoreductase family protein {ECO:0000313|EMBL:KDS31949.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
pyridine nucleotide-disulfide oxidoreductase
L3_114_000G1_scaffold_594_24
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24820..25149
DNA (330bp) protein (110aa)
Transcriptional regulator n=7 Tax=Bacteroides RepID=E5UUP3_9BACE
transcriptional regulator
Uncharacterized protein {ECO:0000313|EMBL:EOS06012.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L3_114_000G1_scaffold_594_25
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25182..26780
DNA (1599bp) protein (533aa)
Transporter periplasmic binding protein n=2 Tax=Bacteroides RepID=E5UUP4_9BACE
Transporter periplasmic binding protein {ECO:0000313|EMBL:EFV67162.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
voltage-gated chloride channel
L3_114_000G1_scaffold_594_26
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26790..27380
DNA (591bp) protein (197aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A6L320_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOS06014.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L3_114_000G1_scaffold_594_27
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27377..29194
DNA (1818bp) protein (606aa)
Tetratricopeptide repeat protein n=1 Tax=Bacteroides vulgatus PC510 RepID=D4V5H7_BACVU
Tetratricopeptide repeat protein {ECO:0000313|EMBL:EFG18846.1}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
transcriptional regulator
L3_114_000G1_scaffold_594_28
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29386..32637
DNA (3252bp) protein (1084aa)
SusC/RagA family TonB-linked outer membrane protein n=1 Tax=Bacteroides vulgatus dnLKV7 RepID=R9HQC9_BACVU
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:EOS06016.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
hypothetical protein
L3_114_000G1_scaffold_594_29
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32649..34070
DNA (1422bp) protein (474aa)
Putative outer membrane protein, probably involved in nutrient binding n=2 Tax=Bacteroides vulgatus RepID=A6L323_BACV8
hypothetical protein
Putative outer membrane protein, probably involved in nutrient binding {ECO:0000313|EMBL:ABR40087.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L3_114_000G1_scaffold_594_30
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34089..35270
DNA (1182bp) protein (394aa)
Thiol:disulfide interchange protein n=3 Tax=Bacteroides vulgatus RepID=A6L324_BACV8
thiol:disulfide interchange protein
Uncharacterized protein {ECO:0000313|EMBL:EOS06018.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
Displaying items 1-30 of 47 in total

View Taxonomy