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L3_114_000G1_scaffold_597

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_000G1_scaffold_597_1
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..1485)
DNA (1485bp) protein (495aa)
Response regulator receiver protein n=2 Tax=Clostridium butyricum RepID=M8K8D2_CLOBU
Two-component response regulator yesN {ECO:0000313|EMBL:KJZ84154.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
response regulator receiver protein
L3_114_000G1_scaffold_597_2
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1498..3279)
DNA (1782bp) protein (594aa)
Sensor histidine kinase n=2 Tax=Clostridium butyricum RepID=M8J4M8_CLOBU
Histidine kinase {ECO:0000313|EMBL:KHD14022.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
sensor histidine kinase
L3_114_000G1_scaffold_597_3
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3566..5941)
DNA (2376bp) protein (792aa)
Probable phosphoketolase {ECO:0000256|HAMAP-Rule:MF_01403}; EC=4.1.2.- {ECO:0000256|HAMAP-Rule:MF_01403};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
xylulose-5-phosphate phosphoketolase (EC:4.1.2.9)
Probable phosphoketolase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JEY6_CLOBU
L3_114_000G1_scaffold_597_4
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5983..8775)
DNA (2793bp) protein (931aa)
Beta-galactosidase {ECO:0000313|EMBL:KJZ84130.1}; EC=3.2.1.23 {ECO:0000313|EMBL:KJZ84130.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AJD8_CLOBU
glycoside hydrolase
L3_114_000G1_scaffold_597_5
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9229..9975)
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0A732_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ32223.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
glycosyl hydrolase family 12
L3_114_000G1_scaffold_597_6
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10235..11056)
DNA (822bp) protein (274aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AHJ2_CLOBU
Acetyl esterase family enzyme {ECO:0000313|EMBL:KJZ96713.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
acetyl esterase
L3_114_000G1_scaffold_597_7
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11159..12943)
DNA (1785bp) protein (595aa)
Lipid A export ATP-binding/permease protein MsbA n=1 Tax=Clostridium butyricum DKU-01 RepID=M8J4M3_CLOBU
Lipid A export ATP-binding/permease protein MsbA {ECO:0000313|EMBL:KJZ84100.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
ABC transporter
L3_114_000G1_scaffold_597_8
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12944..14698)
DNA (1755bp) protein (585aa)
ABC transporter, ATP-binding/permease protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JEY0_CLOBU
Lipid A export ATP-binding/permease protein MsbA {ECO:0000313|EMBL:KJZ84102.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
ABC transporter
L3_114_000G1_scaffold_597_9
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14827..15681
DNA (855bp) protein (285aa)
Transcriptional regulator, AraC family n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JDK4_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ84204.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
AraC family transcriptional regulator
L3_114_000G1_scaffold_597_10
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15872..17701)
DNA (1830bp) protein (610aa)
Glycosyltransferase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K097_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ94064.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
family 2 glycosyl transferase
L3_114_000G1_scaffold_597_11
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17851..18171
DNA (321bp) protein (107aa)
Uncharacterized protein n=3 Tax=Clostridium butyricum RepID=B1R1I7_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:EEP56031.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
L3_114_000G1_scaffold_597_12
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18161..20029
DNA (1869bp) protein (623aa)
glycosyl transferase family protein (EC:2.4.1.-)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YXV8_CLOBU
Polysaccharide deacetylase {ECO:0000313|EMBL:KHD14173.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
L3_114_000G1_scaffold_597_13
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20323..21756
DNA (1434bp) protein (478aa)
Carbon starvation protein CstA n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JEX4_CLOBU
Carbon starvation protein A {ECO:0000313|EMBL:ETI87648.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
carbon starvation protein CstA
L3_114_000G1_scaffold_597_14
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21977..22195)
DNA (219bp) protein (73aa)
GNAT family acetyltransferase n=2 Tax=Clostridium butyricum RepID=M8JDK0_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ92151.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
acetyltransferase, GNAT family
L3_114_000G1_scaffold_597_15
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22248..23420)
DNA (1173bp) protein (391aa)
Phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K090_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ94098.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
5-aminoimidazole-4-carboxamide ribonucleotide transformylase
L3_114_000G1_scaffold_597_16
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23698..25323)
DNA (1626bp) protein (542aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YXW0_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ32235.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
L3_114_000G1_scaffold_597_17
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25332..26105)
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YXA8_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ32236.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
ABC transporter
L3_114_000G1_scaffold_597_18
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26507..26920)
DNA (414bp) protein (138aa)
peptide deformylase (EC:3.5.1.88)
Peptide deformylase n=3 Tax=Clostridium butyricum RepID=B1R1J6_CLOBU
Peptide deformylase {ECO:0000256|RuleBase:RU003335, ECO:0000256|SAAS:SAAS00013131}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
L3_114_000G1_scaffold_597_19
unknown

Not on your lists

comp(26892..26987)
DNA (96bp) protein (32aa)

This feature has no annotations

L3_114_000G1_scaffold_597_20
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27240..27983)
DNA (744bp) protein (248aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Clostridium sp. DL-VIII RepID=G7LZ30_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KJZ94104.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
short-chain dehydrogenase/reductase SDR
L3_114_000G1_scaffold_597_21
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28064..28642)
DNA (579bp) protein (193aa)
Crp/Fnr family transcriptional regulator n=1 Tax=Clostridium sporogenes PA 3679 RepID=G9F0F1_CLOSG
cAMP-binding proteins-catabolite activator and regulatory subunit of cAMP-dependent protein kinase {ECO:0000313|EMBL:KJZ92149.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
Crp/Fnr family transcriptional regulator
L3_114_000G1_scaffold_597_22
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28769..30607)
DNA (1839bp) protein (613aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AHK4_CLOBU
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:KJZ84156.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
methyl-accepting chemotaxis sensory transducer
L3_114_000G1_scaffold_597_23
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30620..32281)
DNA (1662bp) protein (554aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YXW4_CLOBU
Polysaccharide ABC transporter substrate-binding protein {ECO:0000313|EMBL:KJZ84164.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
ABC-type sugar transport system, periplasmic component
L3_114_000G1_scaffold_597_24
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32627..35026)
DNA (2400bp) protein (800aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YXB2_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ32241.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
alpha-amylase
L3_114_000G1_scaffold_597_25
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35139..37262)
DNA (2124bp) protein (708aa)
bglB; thermostable beta-glucosidase B (EC:3.2.1.21)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AJF4_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ32242.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
L3_114_000G1_scaffold_597_26
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(37372..39717)
DNA (2346bp) protein (782aa)
Alpha-xylosidase {ECO:0000313|EMBL:KJZ84147.1}; EC=3.2.1.- {ECO:0000313|EMBL:KJZ84147.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
yicI; alpha-xylosidase YicI (EC:3.2.1.177)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0A748_CLOBU
L3_114_000G1_scaffold_597_27
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(39987..40886)
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AHK9_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ84186.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
AraC family transcriptional regulator
L3_114_000G1_scaffold_597_28
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(40928..42601)
DNA (1674bp) protein (558aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YXW5_CLOBU
Polysaccharide ABC transporter substrate-binding protein {ECO:0000313|EMBL:KJZ84163.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
ABC-type sugar transport system, periplasmic component
L3_114_000G1_scaffold_597_29
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(42711..43598)
DNA (888bp) protein (296aa)
Protein LplC n=2 Tax=Clostridium butyricum RepID=M8K074_CLOBU
Transmembrane lipoprotein {ECO:0000313|EMBL:KJZ84175.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
carbohydrate ABC transporter membrane protein 2, CUT1 family
L3_114_000G1_scaffold_597_30
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(43623..44597)
DNA (975bp) protein (325aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AJF8_CLOBU
Polysaccharide ABC transporter permease {ECO:0000313|EMBL:KJZ84173.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
carbohydrate ABC transporter membrane protein 1, CUT1 family
Displaying items 1-30 of 40 in total

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