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L3_114_000G1_scaffold_601

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Displaying items 1-30 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_000G1_scaffold_601_1
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(86..1378)
DNA (1293bp) protein (431aa)
Transposase, IS116/IS110/IS902 family n=11 Tax=root RepID=A5KMK3_9FIRM
Transposase, IS116/IS110/IS902 family {ECO:0000313|EMBL:EDK24419.1}; TaxID=411460 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques ATCC 27756.;"
transposase IS116/IS110/IS902 family protein
L3_114_000G1_scaffold_601_2
Dialister sp. CAG:357, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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2077..2874
DNA (798bp) protein (266aa)
Mutator family transposase n=1 Tax=Dialister sp. CAG:357 RepID=R7CPK3_9FIRM
Mutator family transposase {ECO:0000313|EMBL:CDD79866.1}; TaxID=1262869 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister; environmental samples.;" source="Dialister sp. CAG:357.;"
ISEf1 family transposase
L3_114_000G1_scaffold_601_3

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2838..3137
DNA (300bp) protein (100aa)
Transposase, mutator type (Fragment) n=1 Tax=gut metagenome RepID=J9FDI3_9ZZZZ
Transposase, Mutator family {ECO:0000313|EMBL:EJW92649.1}; Flags: Fragment;; TaxID=749906 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="gut metagenome.;"
IS256 family transposase
L3_114_000G1_scaffold_601_4
Dialister invisus, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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3399..4040
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Dialister invisus DSM 15470 RepID=C9LPY5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEW97621.1}; TaxID=592028 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister.;" source="Dialister invisus DSM 15470.;"
hypothetical protein
L3_114_000G1_scaffold_601_5
Dorea formicigenerans CAG:28, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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4238..4693
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Dorea formicigenerans CAG:28 RepID=R6SRP8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC58081.1}; TaxID=1263073 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea formicigenerans CAG:28.;"
protein tyrosine phosphatase
L3_114_000G1_scaffold_601_6
Lachnospiraceae bacterium oral taxon 082, Clostridiales, Clostridia, Firmicutes, Bacteria

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4778..5416
DNA (639bp) protein (213aa)
Putative membrane-bound metal-dependent hydrolase n=1 Tax=Lachnospiraceae bacterium oral taxon 082 str. F0431 RepID=H1LS89_9FIRM
Putative membrane-bound metal-dependent hydrolase {ECO:0000313|EMBL:EHO54432.1}; TaxID=861454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium oral taxon 082 str. F0431.;"
Predicted membrane-bound metal-dependent hydrolase (DUF457).
L3_114_000G1_scaffold_601_7
Lachnospiraceae bacterium JC7, Clostridiales, Clostridia, Firmicutes, Bacteria

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5441..6520
DNA (1080bp) protein (360aa)
UPI0003D59F80 related cluster n=1 Tax=unknown RepID=UPI0003D59F80
Membrane protein {ECO:0000313|EMBL:ETP71911.1}; Flags: Precursor;; TaxID=1165092 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium JC7.;"
hypothetical protein
L3_114_000G1_scaffold_601_8
Lachnospiraceae bacterium TWA4, Clostridiales, Clostridia, Firmicutes, Bacteria

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6543..7127
DNA (585bp) protein (195aa)
damage-inducible protein CinA n=1 Tax=Succinivibrionaceae bacterium WG-1 RepID=UPI0002555CDE
TWA4_scaffold00001, whole genome shotgun sequence {ECO:0000313|EMBL:KIR03511.1}; TaxID=1392836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium TWA4.;"
Uncharacterized protein (competence-and mitomycin-induced)
L3_114_000G1_scaffold_601_9
Catenibacterium sp. CAG:290, Catenibacterium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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7198..7416
DNA (219bp) protein (73aa)
Heavy metal-associated domain protein n=1 Tax=Catenibacterium sp. CAG:290 RepID=R7GN69_9FIRM
Heavy metal-associated domain protein {ECO:0000313|EMBL:CDE28555.1}; TaxID=1262767 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Catenibacterium; environmental samples.;" source="Catenibacterium sp. CAG:290.;"
Heavy-metal-associated domain.
L3_114_000G1_scaffold_601_10
Johnsonella ignava, Johnsonella, Clostridiales, Clostridia, Firmicutes, Bacteria

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7532..8725
DNA (1194bp) protein (398aa)
Putative uncharacterized protein n=1 Tax=Johnsonella ignava ATCC 51276 RepID=G5GIZ1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHI55395.1}; TaxID=679200 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Johnsonella.;" source="Johnsonella ignava ATCC 51276.;"
Predicted xylanase/chitin deacetylase
L3_114_000G1_scaffold_601_11
Lachnospiraceae bacterium oral taxon 082, Clostridiales, Clostridia, Firmicutes, Bacteria

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8840..10477
DNA (1638bp) protein (546aa)
ABC transporter, ATP-binding protein n=1 Tax=Lachnospiraceae bacterium oral taxon 082 str. F0431 RepID=H1LYZ0_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EHO49828.1}; TaxID=861454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium oral taxon 082 str. F0431.;"
ATPase components of ABC transporters with duplicated ATPase domains
L3_114_000G1_scaffold_601_12
Lachnospiraceae oral taxon 107, Clostridiales, Clostridia, Firmicutes, Bacteria

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10492..11253
DNA (762bp) protein (254aa)
exoA; Exodeoxyribonuclease (EC:3.1.11.2)
Exodeoxyribonuclease n=1 Tax=Lachnospiraceae oral taxon 107 str. F0167 RepID=F3B1Y5_9FIRM
Exodeoxyribonuclease {ECO:0000313|EMBL:EGG86589.1}; TaxID=575593 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae oral taxon 107 str. F0167.;"
L3_114_000G1_scaffold_601_13
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11277..13154
DNA (1878bp) protein (626aa)
Alpha amylase catalytic region n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R2K3_CLOSW
Pullulanase-like glycosidase possibly secreted by type II secretory pathway {ECO:0000313|EMBL:EXG84017.1}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
alpha amylase
L3_114_000G1_scaffold_601_14
Johnsonella ignava, Johnsonella, Clostridiales, Clostridia, Firmicutes, Bacteria

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13352..15574
DNA (2223bp) protein (741aa)
anaerobic ribonucleoside-triphosphate reductase (EC:1.17.4.2)
Anaerobic ribonucleoside-triphosphate reductase n=1 Tax=Johnsonella ignava ATCC 51276 RepID=G5GIY2_9FIRM
Anaerobic ribonucleoside-triphosphate reductase {ECO:0000313|EMBL:EHI55386.1}; TaxID=679200 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Johnsonella.;" source="Johnsonella ignava ATCC 51276.;"
L3_114_000G1_scaffold_601_15
Butyrivibrio proteoclasticus, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

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15620..16192
DNA (573bp) protein (191aa)
nrdG1; anaerobic ribonucleoside triphosphate reductase activating protein NrdG1 (EC:1.97.1.4)
Anaerobic ribonucleoside-triphosphate reductase-activating protein {ECO:0000256|PIRNR:PIRNR000368}; EC=1.97.1.- {ECO:0000256|PIRNR:PIRNR000368};; TaxID=515622 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio.;" source="Butyrivibrio proteoclasticus (strain ATCC 51982 / DSM 14932 / B316); (Clostridium proteoclasticum).;"
anaerobic ribonucleotide reductase-activating protein n=1 Tax=Butyrivibrio sp. AD3002 RepID=UPI0003B30DA1
L3_114_000G1_scaffold_601_16
Streptococcus equinus, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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16211..16945
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Streptococcus equinus ATCC 9812 RepID=E8JPN7_STREI
Membrane protein {ECO:0000313|EMBL:KFN88119.1}; TaxID=1294274 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus equinus JB1.;"
putative membrane protein, putative Na+channel or pump
L3_114_000G1_scaffold_601_17
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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16972..17607
DNA (636bp) protein (212aa)
Flavin reductase {ECO:0000313|EMBL:EEP65847.1}; EC=1.7.-.- {ECO:0000313|EMBL:EEP65847.1};; TaxID=546273 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar ATCC 17748.;"
Flavin reductase n=1 Tax=Veillonella dispar ATCC 17748 RepID=C4FP27_9FIRM
Multimeric flavodoxin WrbA
L3_114_000G1_scaffold_601_18
Lachnoanaerobaculum sp. OBRC5-5, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17687..18181)
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium OBRC5-5 RepID=K0XDB8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EJZ69088.1}; TaxID=936595 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. OBRC5-5.;"
putative YwbO
L3_114_000G1_scaffold_601_19
Johnsonella ignava, Johnsonella, Clostridiales, Clostridia, Firmicutes, Bacteria

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18315..19406
DNA (1092bp) protein (364aa)
tryptophanyl-tRNA synthetase (EC:6.1.1.2)
Tryptophanyl-tRNA synthetase n=1 Tax=Johnsonella ignava ATCC 51276 RepID=G5GFX0_9FIRM
Tryptophanyl-tRNA synthetase {ECO:0000313|EMBL:EHI56394.1}; TaxID=679200 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Johnsonella.;" source="Johnsonella ignava ATCC 51276.;"
L3_114_000G1_scaffold_601_20
Lachnospiraceae oral taxon 107, Clostridiales, Clostridia, Firmicutes, Bacteria

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19418..19897
DNA (480bp) protein (160aa)
S-ribosylhomocysteine lyase {ECO:0000256|HAMAP-Rule:MF_00091, ECO:0000256|SAAS:SAAS00059609}; EC=4.4.1.21 {ECO:0000256|HAMAP-Rule:MF_00091, ECO:0000256|SAAS:SAAS00059628};; AI-2 synthesis protein {ECO:0000256|HAMAP-Rule:MF_00091}; Autoinducer-2 production protein LuxS {ECO:0000256|HAMAP-Rule:MF_00091}; TaxID=575593 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae oral taxon 107 str. F0167.;"
LuxS protein involved in autoinducer AI2 synthesis (EC:4.4.1.21)
S-ribosylhomocysteine lyase n=1 Tax=Lachnospiraceae oral taxon 107 str. F0167 RepID=F3B2Z6_9FIRM
L3_114_000G1_scaffold_601_21
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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19909..20814
DNA (906bp) protein (302aa)
FAH family protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0DB00_9CLOT
FAH family protein {ECO:0000313|EMBL:EEG51489.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)
L3_114_000G1_scaffold_601_22
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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20768..21517
DNA (750bp) protein (250aa)
Sortase, SrtB family n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R0D0_CLOSW
sortase
Sortase, SrtB family {ECO:0000313|EMBL:ADL06363.1}; Flags: Precursor;; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
L3_114_000G1_scaffold_601_23
Oribacterium sp. oral taxon 078, Oribacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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21665..22744
DNA (1080bp) protein (360aa)
Molybdopterin-guanine dinucleotide biosynthesis protein B n=1 Tax=Oribacterium sp. oral taxon 078 str. F0263 RepID=U2URZ6_9FIRM
Molybdopterin-guanine dinucleotide biosynthesis protein B {ECO:0000313|EMBL:ERL20985.1}; TaxID=1321782 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Oribacterium.;" source="Oribacterium sp. oral taxon 078 str. F0263.;"
mobA-1_mobB; molybdopterin nucleotidyltransferase and molybdopterin-guanine dinucleotide biosynthesis protein MobB
L3_114_000G1_scaffold_601_24
Oribacterium sp. oral taxon 078, Oribacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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22741..23946
DNA (1206bp) protein (402aa)
Molybdenum cofactor synthesis domain protein n=1 Tax=Oribacterium sp. oral taxon 078 str. F0263 RepID=U2W8I4_9FIRM
Molybdenum cofactor synthesis domain protein {ECO:0000313|EMBL:ERL20986.1}; TaxID=1321782 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Oribacterium.;" source="Oribacterium sp. oral taxon 078 str. F0263.;"
molybdenum cofactor biosynthesis protein
L3_114_000G1_scaffold_601_25
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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23970..24794
DNA (825bp) protein (275aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:50 RepID=R5U256_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ65211.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
formate/nitrite transporter family protein
L3_114_000G1_scaffold_601_26
Oribacterium sp. oral taxon 078, Oribacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24819..26654
DNA (1836bp) protein (612aa)
Pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Oribacterium sp. oral taxon 078 str. F0263 RepID=U2W0F6_9FIRM
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:ERL20987.1}; TaxID=1321782 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Oribacterium.;" source="Oribacterium sp. oral taxon 078 str. F0263.;"
putative glutamate synthase (NADPH) small subunit
L3_114_000G1_scaffold_601_27
Oribacterium sp. oral taxon 078, Oribacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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26651..27712
DNA (1062bp) protein (354aa)
Molybdopterin oxidoreductase Fe4S4 domain protein n=1 Tax=Oribacterium sp. oral taxon 078 str. F0263 RepID=U2USE8_9FIRM
Molybdopterin oxidoreductase Fe4S4 domain protein {ECO:0000313|EMBL:ERL20988.1}; TaxID=1321782 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Oribacterium.;" source="Oribacterium sp. oral taxon 078 str. F0263.;"
formate dehydrogenase subunit alpha
L3_114_000G1_scaffold_601_28
Oribacterium sp. oral taxon 078, Oribacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27761..29398
DNA (1638bp) protein (546aa)
Molybdopterin oxidoreductase n=1 Tax=Oribacterium sp. oral taxon 078 str. F0262 RepID=D4CJT9_9FIRM
Molybdopterin oxidoreductase {ECO:0000313|EMBL:EFE92715.1}; TaxID=608534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Oribacterium.;" source="Oribacterium sp. oral taxon 078 str. F0262.;"
formate dehydrogenase subunit alpha
L3_114_000G1_scaffold_601_29
Oribacterium sp. oral taxon 078, Oribacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29388..30149
DNA (762bp) protein (254aa)
Accessory protein FdhD, formate dehydrogenase family n=1 Tax=Oribacterium sp. oral taxon 078 str. F0263 RepID=U2US01_9FIRM
Protein FdhD homolog {ECO:0000256|SAAS:SAAS00093832}; TaxID=1321782 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Oribacterium.;" source="Oribacterium sp. oral taxon 078 str. F0263.;"
fdhD; formate dehydrogenase accessory protein
L3_114_000G1_scaffold_601_30
Oribacterium parvum, Oribacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30227..30871
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Oribacterium sp. ACB1 RepID=G9WQU3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL09753.1}; TaxID=796943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Oribacterium.;" source="Oribacterium parvum ACB1.;"
MobA-like protein
Displaying items 1-30 of 57 in total

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