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L3_114_000G1_scaffold_728

Search features with annotation key words

Displaying items 1-30 of 67 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_000G1_scaffold_728_1
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(144..2084)
DNA (1941bp) protein (647aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
ftsH; Cell division protease FtsH (EC:3.4.24.-)
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SV85_9FIRM
L3_114_000G1_scaffold_728_2
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2123..2647)
DNA (525bp) protein (175aa)
hpt; hypoxanthine-guanine phosphoribosyltransferase (EC:2.4.2.8)
Hypoxanthine phosphoribosyltransferase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U2T1_9FIRM
Hypoxanthine phosphoribosyltransferase {ECO:0000313|EMBL:CDC65127.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L3_114_000G1_scaffold_728_3
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2747..4072)
DNA (1326bp) protein (442aa)
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161};; tRNA(Ile)-2-lysyl-cytidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; tRNA(Ile)-lysidine synthetase {ECO:0000256|HAMAP-Rule:MF_01161}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
tilS; tRNA(Ile)-lysidine synthetase (EC:6.3.4.-)
tRNA(Ile)-lysidine synthase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TBA3_9FIRM
L3_114_000G1_scaffold_728_4
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4065..5426)
DNA (1362bp) protein (454aa)
dnaB; replicative DNA helicase (EC:3.6.1.-)
Replicative DNA helicase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SYT8_9FIRM
Replicative DNA helicase {ECO:0000313|EMBL:CDC65125.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L3_114_000G1_scaffold_728_5
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(5429..5875)
DNA (447bp) protein (149aa)
50S ribosomal protein L9 n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T5W1_9FIRM
rplI; ribosomal protein L9
50S ribosomal protein L9 {ECO:0000256|HAMAP-Rule:MF_00503}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L3_114_000G1_scaffold_728_6
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5900..7876)
DNA (1977bp) protein (659aa)
Phosphoesterase RecJ domain protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SV80_9FIRM
Phosphoesterase RecJ domain protein {ECO:0000313|EMBL:CDC65123.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
conserved hypothetical protein
L3_114_000G1_scaffold_728_7
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7924..9828)
DNA (1905bp) protein (635aa)
Ribonuclease J {ECO:0000313|EMBL:CCO04689.1}; EC=3.1.-.- {ECO:0000313|EMBL:CCO04689.1};; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
Ribonuclease J (EC:3.1.-.-)
RNA-metabolising metallo-beta-lactamase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TBA0_9FIRM
L3_114_000G1_scaffold_728_8
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10171..12321)
DNA (2151bp) protein (717aa)
mannose-1-phosphate guanylyltransferase (EC:2.7.7.13)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T5V7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC65119.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L3_114_000G1_scaffold_728_9
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12481..14841
DNA (2361bp) protein (787aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
pcrA; DNA helicase II / ATP-dependent DNA helicase PcrA (EC:3.6.1.-)
Putative ATP-dependent DNA helicase PcrA n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U2S3_9FIRM
L3_114_000G1_scaffold_728_10
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14943..15155)
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TB95_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO04686.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_114_000G1_scaffold_728_11
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15212..16294)
DNA (1083bp) protein (361aa)
Nucleoside recognition domain protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T5V2_9FIRM
Nucleoside recognition domain protein {ECO:0000313|EMBL:CDC65114.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
ylbJ; Sporulation integral membrane protein YlbJ
L3_114_000G1_scaffold_728_12
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16386..16667
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U2R8_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO04684.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_114_000G1_scaffold_728_13
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16667..17854
DNA (1188bp) protein (396aa)
Putative sporulation protein YqfD n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SYS4_9FIRM
Putative sporulation protein YqfD {ECO:0000313|EMBL:CDC65110.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
yqfD; sporulation protein YqfD
L3_114_000G1_scaffold_728_14
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17907..18944
DNA (1038bp) protein (346aa)
PhoH-like protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U2R5_9FIRM
phoH; PhoH-like protein
PhoH-like protein {ECO:0000313|EMBL:CCO04682.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_114_000G1_scaffold_728_15
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18952..19461
DNA (510bp) protein (170aa)
Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023089}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023108};; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
ybeY; translation metalloprotein YbeY (EC:3.4.24.-)
Endoribonuclease YbeY n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SYS0_9FIRM
L3_114_000G1_scaffold_728_16
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19448..19951
DNA (504bp) protein (168aa)
dgkA; Diacylglycerol kinase (EC:2.7.1.107)
Prokaryotic diacylglycerol kinase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SV61_9FIRM
Prokaryotic diacylglycerol kinase {ECO:0000313|EMBL:CDC65103.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L3_114_000G1_scaffold_728_17
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19948..20862
DNA (915bp) protein (305aa)
GTPase Era n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U2R1_9FIRM
era; ribosome biogenesis GTPase Era
GTPase Era {ECO:0000256|HAMAP-Rule:MF_00367, ECO:0000256|SAAS:SAAS00085723}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_114_000G1_scaffold_728_18
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20932..21054
DNA (123bp) protein (41aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TB84_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC65101.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L3_114_000G1_scaffold_728_19
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21017..21769
DNA (753bp) protein (251aa)
DNA repair protein RecO n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SYR5_9FIRM
recO; DNA repair protein RecO
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_114_000G1_scaffold_728_20
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21814..24210
DNA (2397bp) protein (799aa)
Endonuclease MutS2 {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084206}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084246};; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
Endonuclease MutS2 n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T5T8_9FIRM
mutS2; MutS2 family protein
L3_114_000G1_scaffold_728_21
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24266..24895
DNA (630bp) protein (210aa)
Putative sporulation protein YunB n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SV56_9FIRM
Putative sporulation protein YunB {ECO:0000313|EMBL:CDC65098.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
yunB; Sporulation protein YunB
L3_114_000G1_scaffold_728_22
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25179..27155
DNA (1977bp) protein (659aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
ligA; NAD-dependent DNA ligase LigA (EC:6.5.1.2)
DNA ligase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U2Q7_9FIRM
L3_114_000G1_scaffold_728_23
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27197..27466
DNA (270bp) protein (90aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C {ECO:0000256|HAMAP-Rule:MF_00122}; Short=Asp/Glu-ADT subunit C {ECO:0000256|HAMAP-Rule:MF_00122};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_00122};; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
gatC; glutamyl-tRNA (Gln) amidotransferase, subunit C (EC:6.3.5.7)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TB80_9FIRM
L3_114_000G1_scaffold_728_24
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27518..28930
DNA (1413bp) protein (471aa)
Glutamyl-tRNA(Gln) amidotransferase subunit A {ECO:0000256|HAMAP-Rule:MF_00120}; Short=Glu-ADT subunit A {ECO:0000256|HAMAP-Rule:MF_00120};; EC=6.3.5.7 {ECO:0000256|HAMAP-Rule:MF_00120};; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
gatA; glutamyl-tRNA (Gln) amidotransferase, subunit A (EC:6.3.5.7)
Glutamyl-tRNA(Gln) amidotransferase subunit A n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SYQ9_9FIRM
L3_114_000G1_scaffold_728_25
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28948..30384
DNA (1437bp) protein (479aa)
gatB; glutamyl-tRNA (Gln) amidotransferase, subunit B (EC:6.3.5.7)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B {ECO:0000256|HAMAP-Rule:MF_00121, ECO:0000256|SAAS:SAAS00247567}; Short=Asp/Glu-ADT subunit B {ECO:0000256|HAMAP-Rule:MF_00121};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_00121};; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T5T1_9FIRM
L3_114_000G1_scaffold_728_26
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30444..31820)
DNA (1377bp) protein (459aa)
tRNA methylthiotransferase YqeV n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SV50_9FIRM
radical SAM methylthiotransferase, MiaB/RimO family
Radical SAM methylthiotransferase, MiaB/RimO family {ECO:0000313|EMBL:CCO04670.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_114_000G1_scaffold_728_27
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31999..32229
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U2Q3_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDC65092.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L3_114_000G1_scaffold_728_28
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32729..32983
DNA (255bp) protein (85aa)
PTS HPr component phosphorylation site n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TB76_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO04668.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_114_000G1_scaffold_728_29
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33093..33851
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SYQ4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC65090.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein
L3_114_000G1_scaffold_728_30
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33948..35435
DNA (1488bp) protein (496aa)
L-fucose isomerase-like n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T5S7_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO04666.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
Displaying items 1-30 of 67 in total

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