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L3_114_000G1_scaffold_3883

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_000G1_scaffold_3883_1
Actinomyces sp. oral taxon 181, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(1..282)
DNA (282bp) protein (94aa)
hypothetical protein n=1 Tax=Actinomyces sp. ph3 RepID=UPI00031BB82D
N utilization substance protein B homolog {ECO:0000256|HAMAP-Rule:MF_00073, ECO:0000256|SAAS:SAAS00057003}; Short=Protein NusB {ECO:0000256|HAMAP-Rule:MF_00073};; TaxID=1127690 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. oral taxon 181 str. F0379.;"
L3_114_000G1_scaffold_3883_2
Actinomyces sp. ICM47, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(285..848)
DNA (564bp) protein (188aa)
elongation factor P n=1 Tax=Actinomyces sp. ph3 RepID=UPI0002D9C7C6
Elongation factor P {ECO:0000256|HAMAP-Rule:MF_00141}; Short=EF-P {ECO:0000256|HAMAP-Rule:MF_00141};; TaxID=936548 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM47.;"
elongation factor P
L3_114_000G1_scaffold_3883_3
Actinomyces sp. oral taxon 181, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(876..1439)
DNA (564bp) protein (188aa)
aroK; shikimate kinase (EC:2.7.1.71)
hypothetical protein n=1 Tax=Actinomyces sp. ph3 RepID=UPI0002F3DC54
Shikimate kinase {ECO:0000313|EMBL:EKY14497.1}; TaxID=1127690 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. oral taxon 181 str. F0379.;"
L3_114_000G1_scaffold_3883_4
Actinomyces sp. oral taxon 181, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1409..2488)
DNA (1080bp) protein (360aa)
3-dehydroquinate synthase {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210858}; EC=4.2.3.4 {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210855};; TaxID=1127690 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. oral taxon 181 str. F0379.;"
3-dehydroquinate synthase n=1 Tax=Actinomyces sp. oral taxon 181 str. F0379 RepID=L1PFR4_9ACTO
3-dehydroquinate synthase
L3_114_000G1_scaffold_3883_5
Actinomyces sp. oral taxon 181, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2460..2990)
DNA (531bp) protein (177aa)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=1127690 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. oral taxon 181 str. F0379.;"
hypothetical protein n=1 Tax=Actinomyces sp. ph3 RepID=UPI00037A19CA
shikimate kinase
L3_114_000G1_scaffold_3883_6
Actinomyces sp. oral taxon 181, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2987..4207)
DNA (1221bp) protein (407aa)
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605};; 5-enolpyruvylshikimate-3-phosphate phospholyase {ECO:0000256|HAMAP-Rule:MF_00300}; TaxID=1127690 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. oral taxon 181 str. F0379.;"
chorismate synthase (EC:4.2.3.5)
Chorismate synthase n=1 Tax=Actinomyces sp. oral taxon 181 str. F0379 RepID=L1PFK3_9ACTO
L3_114_000G1_scaffold_3883_7
Actinomyces sp. oral taxon 181, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4255..5265)
DNA (1011bp) protein (337aa)
Uncharacterized protein n=1 Tax=Actinomyces sp. oral taxon 181 str. F0379 RepID=L1PFM0_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EKY14493.1}; TaxID=1127690 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. oral taxon 181 str. F0379.;"
hypothetical protein
L3_114_000G1_scaffold_3883_8
Actinomyces sp. oral taxon 181, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5262..6662)
DNA (1401bp) protein (467aa)
hypothetical protein n=1 Tax=Actinomyces sp. ph3 RepID=UPI00031C054A
Putative proteasome accessory factor PafA {ECO:0000313|EMBL:EKY14492.1}; TaxID=1127690 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. oral taxon 181 str. F0379.;"
hypothetical protein
L3_114_000G1_scaffold_3883_9
Actinomyces sp. oral taxon 181, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6664..6849)
DNA (186bp) protein (62aa)
Ubiquitin-like protein Pup n=1 Tax=Actinomyces sp. oral taxon 181 str. F0379 RepID=L1PFR0_9ACTO
Ubiquitin-like protein Pup {ECO:0000313|EMBL:EKY14491.1}; TaxID=1127690 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. oral taxon 181 str. F0379.;"
hypothetical protein
L3_114_000G1_scaffold_3883_10
Actinomyces sp. oral taxon 181, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6852..8414)
DNA (1563bp) protein (521aa)
hypothetical protein n=1 Tax=Actinomyces sp. ph3 RepID=UPI0002E5BEFE
Proteasome accessory factor PafA2 {ECO:0000313|EMBL:EKY14490.1}; TaxID=1127690 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. oral taxon 181 str. F0379.;"
peptidase
L3_114_000G1_scaffold_3883_11
Actinomyces sp. oral taxon 181, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8411..9925)
DNA (1515bp) protein (505aa)
Proteasome ATPase n=1 Tax=Actinomyces sp. oral taxon 181 str. F0379 RepID=L1PFJ8_9ACTO
AAA ATPase forming ring-shaped complexes {ECO:0000256|SAAS:SAAS00017598}; TaxID=1127690 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. oral taxon 181 str. F0379.;"
ATPase AAA
L3_114_000G1_scaffold_3883_12
Actinomyces sp. oral taxon 181, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9912..10970)
DNA (1059bp) protein (353aa)
tRNA methyltransferase complex GCD14 subunit n=1 Tax=Actinomyces sp. oral taxon 181 str. F0379 RepID=L1PFL5_9ACTO
tRNA methyltransferase complex GCD14 subunit {ECO:0000313|EMBL:EKY14488.1}; TaxID=1127690 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. oral taxon 181 str. F0379.;"
tRNA methyltransferase complex GCD14 subunit
L3_114_000G1_scaffold_3883_13
Actinomyces sp. S6-Spd3, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11028..11873
DNA (846bp) protein (282aa)
hypothetical protein n=1 Tax=Actinomyces sp. ph3 RepID=UPI0003180794
RecB family exonuclease {ECO:0000313|EMBL:KGE99387.1}; TaxID=1284680 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. S6-Spd3.;"
hypothetical protein
L3_114_000G1_scaffold_3883_14
Actinomyces sp. oral taxon 181, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11867..12550)
DNA (684bp) protein (228aa)
HAD hydrolase, family IA, variant 3 n=1 Tax=Actinomyces sp. oral taxon 181 str. F0379 RepID=L1PFQ7_9ACTO
HAD hydrolase, family IA, variant 3 {ECO:0000313|EMBL:EKY14486.1}; TaxID=1127690 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. oral taxon 181 str. F0379.;"
putative phosphatase
L3_114_000G1_scaffold_3883_15
Actinomyces sp. oral taxon 181, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12577..13434)
DNA (858bp) protein (286aa)
Undecaprenyl-diphosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; EC=3.6.1.27 {ECO:0000256|HAMAP-Rule:MF_01006};; Bacitracin resistance protein {ECO:0000256|HAMAP-Rule:MF_01006}; Undecaprenyl pyrophosphate phosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; TaxID=1127690 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. oral taxon 181 str. F0379.;"
Undecaprenyl-diphosphatase n=1 Tax=Actinomyces sp. oral taxon 181 str. F0379 RepID=L1PGB2_9ACTO
bacitracin resistance protein
L3_114_000G1_scaffold_3883_16
Actinomyces sp. oral taxon 181, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13523..14440
DNA (918bp) protein (306aa)
Oxidoreductase, aldo/keto reductase family protein n=1 Tax=Actinomyces sp. oral taxon 181 str. F0379 RepID=L1PFJ3_9ACTO
Oxidoreductase, aldo/keto reductase family protein {ECO:0000313|EMBL:EKY14484.1}; TaxID=1127690 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. oral taxon 181 str. F0379.;"
aldo/keto reductase
Displaying 16 items

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