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L3_114_000G1_scaffold_3915

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_000G1_scaffold_3915_1
Actinomyces sp. oral taxon 181, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(15..800)
DNA (786bp) protein (262aa)
hypothetical protein n=1 Tax=Actinomyces sp. ph3 RepID=UPI00035ED5EA
Transcriptional regulator, GntR family {ECO:0000313|EMBL:EKY14304.1}; TaxID=1127690 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. oral taxon 181 str. F0379.;"
regulatory protein GntR HTH
L3_114_000G1_scaffold_3915_2
Actinomyces sp. oral taxon 181, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

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1068..3923
DNA (2856bp) protein (952aa)
Protein translocase subunit SecA n=1 Tax=Actinomyces sp. oral taxon 181 str. F0379 RepID=L1PFV2_9ACTO
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=1127690 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. oral taxon 181 str. F0379.;"
secA; IISP family type II (general) secretory pathway protein SecA
L3_114_000G1_scaffold_3915_3
Actinomyces sp. oral taxon 181, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(3998..4495)
DNA (498bp) protein (166aa)
hypothetical protein n=1 Tax=Actinomyces sp. ph3 RepID=UPI00037851EE
Uncharacterized protein {ECO:0000313|EMBL:EKY14306.1}; TaxID=1127690 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. oral taxon 181 str. F0379.;"
L3_114_000G1_scaffold_3915_4
unknown

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comp(4717..4860)
DNA (144bp) protein (48aa)

This feature has no annotations

L3_114_000G1_scaffold_3915_5
Actinomyces sp. oral taxon 181, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(4877..5095)
DNA (219bp) protein (73aa)
DNA binding domain, excisionase family n=1 Tax=Actinomyces sp. oral taxon 181 str. F0379 RepID=L1PFZ1_9ACTO
DNA binding domain, excisionase family {ECO:0000313|EMBL:EKY14307.1}; TaxID=1127690 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. oral taxon 181 str. F0379.;"
DNA binding domain-containing protein
L3_114_000G1_scaffold_3915_6
Actinomyces sp. oral taxon 181, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5343..5804
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Actinomyces sp. oral taxon 181 str. F0379 PF56_9ACTO">RepID=L1PF56_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EKY14308.1}; TaxID=1127690 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. oral taxon 181 str. F0379.;"
L3_114_000G1_scaffold_3915_7
Actinomyces sp. oral taxon 181, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(5808..8873)
DNA (3066bp) protein (1022aa)
hypothetical protein n=1 Tax=Actinomyces sp. ph3 RepID=UPI0002E0231B
Exonuclease SbcCD, C subunit {ECO:0000313|EMBL:EKY14309.1}; TaxID=1127690 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. oral taxon 181 str. F0379.;"
SMC domain-containing protein
L3_114_000G1_scaffold_3915_8
Actinomyces sp. oral taxon 181, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(8870..10120)
DNA (1251bp) protein (417aa)
hypothetical protein n=1 Tax=Actinomyces sp. ph3 RepID=UPI0002FD991C
Exonuclease SbcCD, D subunit {ECO:0000313|EMBL:EKY14310.1}; TaxID=1127690 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. oral taxon 181 str. F0379.;"
exodeoxyribonuclease I subunit D
L3_114_000G1_scaffold_3915_9
Actinomyces sp. oral taxon 181, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10193..11263)
DNA (1071bp) protein (357aa)
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=1127690 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. oral taxon 181 str. F0379.;"
Putative ribosome biogenesis GTPase RsgA n=1 Tax=Actinomyces sp. oral taxon 181 str. F0379 PF93_9ACTO">RepID=L1PF93_9ACTO
GTP-binding protein
L3_114_000G1_scaffold_3915_10
Actinomyces sp. oral taxon 181, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11256..12569)
DNA (1314bp) protein (438aa)
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531};; 5-enolpyruvylshikimate-3-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00210}; TaxID=1127690 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. oral taxon 181 str. F0379.;"
3-phosphoshikimate 1-carboxyvinyltransferase (EC:2.5.1.19)
hypothetical protein n=1 Tax=Actinomyces sp. ph3 RepID=UPI00036E2A07
L3_114_000G1_scaffold_3915_11
Actinomyces sp. oral taxon 181, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12566..13021)
DNA (456bp) protein (152aa)
hypothetical protein n=1 Tax=Actinomyces sp. ph3 RepID=UPI0002F4AC26
Uncharacterized protein {ECO:0000313|EMBL:EKY14313.1}; TaxID=1127690 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. oral taxon 181 str. F0379.;"
DoxX family protein
L3_114_000G1_scaffold_3915_12
Actinomyces sp. oral taxon 181, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13260..13853
DNA (594bp) protein (198aa)
RNA polymerase sigma factor n=1 Tax=Actinomyces sp. oral taxon 181 str. F0379 PF41_9ACTO">RepID=L1PF41_9ACTO
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1127690 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. oral taxon 181 str. F0379.;"
ECF subfamily RNA polymerase sigma-24 subunit
L3_114_000G1_scaffold_3915_13
Actinomyces sp. oral taxon 181, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13937..14440)
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Actinomyces sp. oral taxon 181 str. F0379 RepID=L1PFW0_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EKY14315.1}; TaxID=1127690 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. oral taxon 181 str. F0379.;"
Displaying 13 items

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