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L3_114_000G1_scaffold_4057

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_000G1_scaffold_4057_1
Lachnoanaerobaculum sp. MSX33, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..1424)
DNA (1422bp) protein (474aa)
Penicillin-binding protein, transpeptidase domain protein n=1 Tax=Lachnospiraceae bacterium ICM7 RepID=J4KA18_9FIRM
Penicillin-binding protein, transpeptidase domain protein {ECO:0000313|EMBL:ETO98415.1}; TaxID=936596 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. MSX33.;"
penicillin-binding protein transpeptidase
L3_114_000G1_scaffold_4057_2
Lachnoanaerobaculum sp. ICM7, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1424..1933)
DNA (510bp) protein (170aa)
Rod shape-determining protein MreD n=1 Tax=Lachnospiraceae bacterium ICM7 RepID=J4UHT8_9FIRM
Rod shape-determining protein MreD {ECO:0000313|EMBL:EJP23832.1}; TaxID=936594 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. ICM7.;"
rod shape-determining protein MreD
L3_114_000G1_scaffold_4057_3
Lachnoanaerobaculum sp. MSX33, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1934..2764)
DNA (831bp) protein (277aa)
Cell shape-determining protein MreC n=1 Tax=Lachnospiraceae bacterium ICM7 RepID=J4TIS2_9FIRM
Cell shape-determining protein MreC {ECO:0000256|PIRNR:PIRNR038471}; Cell shape protein MreC {ECO:0000256|PIRNR:PIRNR038471}; TaxID=936596 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. MSX33.;"
rod shape-determining protein MreC
L3_114_000G1_scaffold_4057_4
Lachnoanaerobaculum sp. MSX33, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2764..3453)
DNA (690bp) protein (230aa)
RadC-like JAB domain protein n=1 Tax=Lachnospiraceae bacterium ICM7 RepID=J4UHV1_9FIRM
RadC-like JAB domain protein {ECO:0000313|EMBL:ETO98433.1}; TaxID=936596 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. MSX33.;"
DNA replication and repair protein RadC
L3_114_000G1_scaffold_4057_5
Lachnoanaerobaculum sp. OBRC5-5, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3539..4816)
DNA (1278bp) protein (426aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium OBRC5-5 RepID=K0XHC9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EJZ70697.1}; TaxID=936595 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. OBRC5-5.;"
Cystathionine beta-lyase family protein involved in aluminum resistance
L3_114_000G1_scaffold_4057_6
Lachnoanaerobaculum sp. ICM7, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4809..5759)
DNA (951bp) protein (317aa)
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate:tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; Isopentenyl-diphosphate:tRNA isopentenyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; TaxID=936594 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. ICM7.;"
tRNA isopentenyltransferase (miaA) (EC:2.5.1.75)
tRNA dimethylallyltransferase n=1 Tax=Lachnospiraceae bacterium ICM7 RepID=J4KA27_9FIRM
L3_114_000G1_scaffold_4057_7
Lachnoanaerobaculum sp. ICM7, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5756..7738)
DNA (1983bp) protein (661aa)
DNA mismatch repair protein MutL n=1 Tax=Lachnospiraceae bacterium ICM7 RepID=J5H3K3_9FIRM
DNA mismatch repair protein MutL {ECO:0000256|HAMAP-Rule:MF_00149, ECO:0000256|SAAS:SAAS00058680}; TaxID=936594 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. ICM7.;"
DNA mismatch repair protein MutL
L3_114_000G1_scaffold_4057_8
Lachnoanaerobaculum sp. ICM7, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7743..10391)
DNA (2649bp) protein (883aa)
DNA mismatch repair protein MutS n=1 Tax=Lachnospiraceae bacterium ICM7 RepID=J5GVZ0_9FIRM
DNA mismatch repair protein MutS {ECO:0000256|HAMAP-Rule:MF_00096, ECO:0000256|SAAS:SAAS00184333}; TaxID=936594 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. ICM7.;"
DNA mismatch repair protein MutS
L3_114_000G1_scaffold_4057_9
Lachnoanaerobaculum sp. ICM7, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10392..11819)
DNA (1428bp) protein (476aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00078006}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00077858};; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0000256|HAMAP-Rule:MF_01864}; tRNA-i(6)A37 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01864}; TaxID=936594 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. ICM7.;"
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB n=1 Tax=Lachnospiraceae bacterium ICM7 RepID=J4KA19_9FIRM
tRNA-i(6)A37 thiotransferase enzyme MiaB
L3_114_000G1_scaffold_4057_10
Lachnoanaerobaculum sp. ICM7, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11874..12440)
DNA (567bp) protein (189aa)
5-formyltetrahydrofolate cyclo-ligase {ECO:0000256|RuleBase:RU361279}; EC=6.3.3.2 {ECO:0000256|RuleBase:RU361279};; TaxID=936594 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. ICM7.;"
5-formyltetrahydrofolate cyclo-ligase n=1 Tax=Lachnospiraceae bacterium ICM7 RepID=J4TIL5_9FIRM
5-formyltetrahydrofolate cyclo-ligase
L3_114_000G1_scaffold_4057_11
Lachnoanaerobaculum sp. ICM7, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12433..12651)
DNA (219bp) protein (73aa)
5,10-methenyltetrahydrofolate synthetase (EC:6.3.3.2)
UPF0291 protein HMPREF1140_0971 n=1 Tax=Lachnospiraceae bacterium ICM7 RepID=J4TIQ4_9FIRM
UPF0291 protein HMPREF1140_0971 {ECO:0000256|HAMAP-Rule:MF_01103}; TaxID=936594 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. ICM7.;"
L3_114_000G1_scaffold_4057_12
Lachnoanaerobaculum sp. ICM7, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12659..13495)
DNA (837bp) protein (279aa)
Glutamate 5-kinase {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00186442}; EC=2.7.2.11 {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00186442};; Gamma-glutamyl kinase {ECO:0000256|HAMAP-Rule:MF_00456}; TaxID=936594 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. ICM7.;"
glutamate 5-kinase (EC:2.7.2.11)
Glutamate 5-kinase n=1 Tax=Lachnospiraceae bacterium ICM7 RepID=J5GWR7_9FIRM
L3_114_000G1_scaffold_4057_13
Lachnoanaerobaculum sp. ICM7, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13497..14039)
DNA (543bp) protein (181aa)
Pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Lachnospiraceae bacterium ICM7 RepID=J5GVS4_9FIRM
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:EJP23610.1}; TaxID=936594 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. ICM7.;"
Uncharacterized FAD-dependent dehydrogenases
Displaying 13 items

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