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L3_114_000G1_scaffold_227

Search features with annotation key words

Displaying items 1-30 of 94 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_000G1_scaffold_227_1
Lachnoanaerobaculum sp. ICM7, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..186)
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium ICM7 RepID=J4U9L9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EJP18682.1}; TaxID=936594 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. ICM7.;"
ECF subfamily RNA polymerase sigma-24 subunit
L3_114_000G1_scaffold_227_2
Lachnoanaerobaculum sp. ICM7, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(214..1212)
DNA (999bp) protein (333aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium ICM7 RepID=J4K745_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EJP18631.1}; TaxID=936594 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. ICM7.;"
cell envelope-related function transcriptional attenuator common domain
L3_114_000G1_scaffold_227_3
Lachnoanaerobaculum sp. ICM7, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1209..1889)
DNA (681bp) protein (227aa)
Putative polysaccharide capsule synthesis protein CpsD n=1 Tax=Lachnospiraceae bacterium ICM7 RepID=J4U9F7_9FIRM
Putative polysaccharide capsule synthesis protein CpsD {ECO:0000313|EMBL:EJP18572.1}; TaxID=936594 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. ICM7.;"
capsular exopolysaccharide family
L3_114_000G1_scaffold_227_4
Lachnoanaerobaculum sp. ICM7, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1906..2598)
DNA (693bp) protein (231aa)
Chain length determinant protein n=1 Tax=Lachnospiraceae bacterium ICM7 RepID=J5GHV1_9FIRM
Chain length determinant protein {ECO:0000313|EMBL:EJP18578.1}; TaxID=936594 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. ICM7.;"
Capsular polysaccharide biosynthesis protein
L3_114_000G1_scaffold_227_5
Lachnoanaerobaculum sp. ICM7, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2613..3323)
DNA (711bp) protein (237aa)
PHP domain protein {ECO:0000313|EMBL:EJP18700.1}; EC=3.1.3.- {ECO:0000313|EMBL:EJP18700.1};; TaxID=936594 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. ICM7.;"
Capsular polysaccharide biosynthesis protein (EC:3.1.3.48)
PHP domain protein n=1 Tax=Lachnospiraceae bacterium ICM7 RepID=J5GBF2_9FIRM
L3_114_000G1_scaffold_227_6
unknown

Not on your lists

comp(3377..3517)
DNA (141bp) protein (47aa)

This feature has no annotations

L3_114_000G1_scaffold_227_7
Lachnoanaerobaculum sp. ICM7, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3650..4312
DNA (663bp) protein (221aa)
Response regulator receiver domain protein n=1 Tax=Lachnospiraceae bacterium ICM7 RepID=J4TAZ1_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:EJP18584.1}; TaxID=936594 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. ICM7.;"
cutR; transcriptional regulatory protein cutR
L3_114_000G1_scaffold_227_8
Lachnoanaerobaculum sp. ICM7, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4356..4949)
DNA (594bp) protein (198aa)
Redoxin n=1 Tax=Lachnospiraceae bacterium ICM7 RepID=J4U9N3_9FIRM
Redoxin {ECO:0000313|EMBL:EJP18707.1}; TaxID=936594 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. ICM7.;"
thioredoxin domain-containing protein
L3_114_000G1_scaffold_227_9
Lachnoanaerobaculum sp. ICM7, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5024..5776)
DNA (753bp) protein (251aa)
Putative lipoprotein n=1 Tax=Lachnospiraceae bacterium ICM7 RepID=J4TB39_9FIRM
Putative lipoprotein {ECO:0000313|EMBL:EJP18689.1}; TaxID=936594 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. ICM7.;"
L3_114_000G1_scaffold_227_10
Lachnoanaerobaculum sp. ICM7, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5818..5979)
DNA (162bp) protein (54aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium ICM7 RepID=J4U9G9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EJP18592.1}; TaxID=936594 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. ICM7.;"
L3_114_000G1_scaffold_227_11
Lachnoanaerobaculum sp. ICM7, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5976..7088)
DNA (1113bp) protein (371aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=936594 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. ICM7.;"
GHKL domain protein n=1 Tax=Lachnospiraceae bacterium ICM7 RepID=J5GI11_9FIRM
integral membrane sensor signal transduction histidine kinase
L3_114_000G1_scaffold_227_12
Lachnoanaerobaculum sp. ICM7, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7054..7998)
DNA (945bp) protein (315aa)
4Fe-4S binding domain protein n=1 Tax=Lachnospiraceae bacterium ICM7 RepID=J4TAW7_9FIRM
4Fe-4S binding domain protein {ECO:0000313|EMBL:EJP18544.1}; TaxID=936594 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. ICM7.;"
4Fe-4S ferredoxin
L3_114_000G1_scaffold_227_13
Lachnoanaerobaculum sp. OBRC5-5, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8454..9707)
DNA (1254bp) protein (418aa)
UPF0348 protein HMPREF1135_01055 n=1 Tax=Clostridiales bacterium OBRC5-5 RepID=K0XRD4_9FIRM
UPF0348 protein HMPREF1135_01055 {ECO:0000256|HAMAP-Rule:MF_01539}; TaxID=936595 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. OBRC5-5.;"
hypothetical protein
L3_114_000G1_scaffold_227_14
Lachnoanaerobaculum sp. ICM7, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9757..10509)
DNA (753bp) protein (251aa)
4-hydroxy-tetrahydrodipicolinate reductase {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018068}; Short=HTPA reductase {ECO:0000256|HAMAP-Rule:MF_00102};; EC=1.17.1.8 {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018030};; TaxID=936594 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. ICM7.;"
dihydrodipicolinate reductase (EC:1.3.1.26)
4-hydroxy-tetrahydrodipicolinate reductase n=1 Tax=Lachnospiraceae bacterium ICM7 RepID=J5GAU3_9FIRM
L3_114_000G1_scaffold_227_15
Lachnoanaerobaculum sp. MSX33, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10509..11390)
DNA (882bp) protein (294aa)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086366}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421};; TaxID=936596 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. MSX33.;"
dihydrodipicolinate synthase (EC:4.2.1.52)
4-hydroxy-tetrahydrodipicolinate synthase n=1 Tax=Lachnospiraceae bacterium ICM7 RepID=J4TAX2_9FIRM
L3_114_000G1_scaffold_227_16
Lachnoanaerobaculum sp. MSX33, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11401..12726)
DNA (1326bp) protein (442aa)
Chloride transporter, ClC family n=1 Tax=Lachnospiraceae bacterium ICM7 RepID=J5GHY2_9FIRM
Chloride transporter, ClC family {ECO:0000313|EMBL:ETO97008.1}; TaxID=936596 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. MSX33.;"
Chloride channel protein EriC
L3_114_000G1_scaffold_227_17
Lachnoanaerobaculum sp. ICM7, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12719..13972)
DNA (1254bp) protein (418aa)
Threonine ammonia-lyase {ECO:0000313|EMBL:EJP18679.1}; EC=4.3.1.19 {ECO:0000313|EMBL:EJP18679.1};; TaxID=936594 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. ICM7.;"
threonine dehydratase, medium form (EC:4.3.1.19)
Threonine ammonia-lyase n=1 Tax=Lachnospiraceae bacterium ICM7 RepID=J4TB34_9FIRM
L3_114_000G1_scaffold_227_18
Lachnoanaerobaculum sp. OBRC5-5, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13993..14922)
DNA (930bp) protein (310aa)
Signal recognition particle receptor FtsY n=1 Tax=Clostridiales bacterium OBRC5-5 RepID=K0XRD7_9FIRM
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=936595 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. OBRC5-5.;"
signal recognition particle-docking protein FtsY
L3_114_000G1_scaffold_227_19
Lachnoanaerobaculum sp. ICM7, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14932..18489)
DNA (3558bp) protein (1186aa)
Chromosome partition protein Smc n=1 Tax=Lachnospiraceae bacterium ICM7 RepID=J4K726_9FIRM
Chromosome partition protein Smc {ECO:0000256|HAMAP-Rule:MF_01894}; TaxID=936594 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. ICM7.;"
chromosome segregation protein SMC
L3_114_000G1_scaffold_227_20
Lachnoanaerobaculum sp. OBRC5-5, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18480..19178)
DNA (699bp) protein (233aa)
Ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231299}; EC=3.1.26.3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231445};; Ribonuclease III {ECO:0000256|HAMAP-Rule:MF_00104}; TaxID=936595 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. OBRC5-5.;"
Ribonuclease 3 n=1 Tax=Clostridiales bacterium OBRC5-5 RepID=K0XHZ7_9FIRM
ribonuclease III
L3_114_000G1_scaffold_227_21
Lachnoanaerobaculum sp. ICM7, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19559..19792)
DNA (234bp) protein (78aa)
Acyl carrier protein n=2 Tax=Clostridiales RepID=J5GAR5_9FIRM
Acyl carrier protein {ECO:0000256|HAMAP-Rule:MF_01217, ECO:0000256|RuleBase:RU003545}; Short=ACP {ECO:0000256|HAMAP-Rule:MF_01217};; TaxID=936594 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. ICM7.;"
acyl carrier protein
L3_114_000G1_scaffold_227_22
Lachnoanaerobaculum sp. ICM7, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19806..20798)
DNA (993bp) protein (331aa)
Phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054336}; EC=2.3.1.n2 {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054327};; Acyl-ACP phosphotransacylase {ECO:0000256|HAMAP-Rule:MF_00019}; Acyl-[acyl-carrier-protein]--phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019}; Phosphate-acyl-ACP acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019}; TaxID=936594 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. ICM7.;"
Phosphate acyltransferase n=1 Tax=Lachnospiraceae bacterium ICM7 RepID=J5GHP4_9FIRM
fatty acid/phospholipid synthesis protein PlsX
L3_114_000G1_scaffold_227_23
Lachnoanaerobaculum sp. ICM7, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20942..21190)
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium ICM7 RepID=J5GBE0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EJP18690.1}; TaxID=936594 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. ICM7.;"
L3_114_000G1_scaffold_227_24
Lachnoanaerobaculum sp. ICM7, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21171..22193)
DNA (1023bp) protein (341aa)
Cobalamin biosynthesis protein n=1 Tax=Lachnospiraceae bacterium ICM7 RepID=J5GHV8_9FIRM
Cobalamin biosynthesis protein {ECO:0000313|EMBL:EJP18583.1}; TaxID=936594 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. ICM7.;"
Cobalamin biosynthesis protein CbiG
L3_114_000G1_scaffold_227_25
Lachnoanaerobaculum sp. ICM7, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22199..23044)
DNA (846bp) protein (282aa)
CAAX protease self-immunity n=1 Tax=Lachnospiraceae bacterium ICM7 RepID=J4U9N0_9FIRM
CAAX protease self-immunity {ECO:0000313|EMBL:EJP18702.1}; TaxID=936594 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. ICM7.;"
CAAX amino terminal protease family protein
L3_114_000G1_scaffold_227_26
Lachnoanaerobaculum sp. ICM7, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(23119..24225)
DNA (1107bp) protein (369aa)
S1 RNA binding domain protein n=1 Tax=Lachnospiraceae bacterium ICM7 RepID=J4TB24_9FIRM
S1 RNA binding domain protein {ECO:0000313|EMBL:EJP18654.1}; TaxID=936594 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. ICM7.;"
Ribosomal protein S1
L3_114_000G1_scaffold_227_27
Lachnoanaerobaculum sp. ICM7, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24206..25054)
DNA (849bp) protein (283aa)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570}; EC=1.17.1.2 {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570};; TaxID=936594 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. ICM7.;"
(E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) (EC:1.17.1.2)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1 Tax=Lachnospiraceae bacterium ICM7 RepID=J4TAY1_9FIRM
L3_114_000G1_scaffold_227_28
Lachnoanaerobaculum sp. ICM7, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25051..25716)
DNA (666bp) protein (222aa)
Cytidylate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; Short=CK {ECO:0000256|HAMAP-Rule:MF_00238};; EC=2.7.4.25 {ECO:0000256|HAMAP-Rule:MF_00238};; Cytidine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; TaxID=936594 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. ICM7.;"
cytidylate kinase (EC:2.7.4.14)
Cytidylate kinase n=1 Tax=Lachnospiraceae bacterium ICM7 RepID=J5GB57_9FIRM
L3_114_000G1_scaffold_227_29
Lachnoanaerobaculum sp. ICM7, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25697..26938)
DNA (1242bp) protein (414aa)
Flavoprotein family protein n=1 Tax=Lachnospiraceae bacterium ICM7 RepID=J5GAY1_9FIRM
Flavoprotein family protein {ECO:0000313|EMBL:EJP18575.1}; TaxID=936594 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. ICM7.;"
conserved hypothetical protein TIGR00275
L3_114_000G1_scaffold_227_30
Lachnoanaerobaculum sp. ICM7, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26940..28259)
DNA (1320bp) protein (440aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=936594 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. ICM7.;"
Aspartokinase n=1 Tax=Lachnospiraceae bacterium ICM7 RepID=J5GB94_9FIRM
aspartate kinase
Displaying items 1-30 of 94 in total

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